RNA–Protein interactions for RNA: ENST00000534938.6

FCF1-202, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-202ENST00000534938 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
FCF1-202ENST00000534938 PNMA8AQ86V59 439 aaPredicted RBP13.62□□□□□ -0.23
FCF1-202ENST00000534938 NBPF5PQ86XG9 351 aaPredicted RBP13.62□□□□□ -0.23
FCF1-202ENST00000534938 FMNL2Q96PY5 1086 aa13.62□□□□□ -0.23
FCF1-202ENST00000534938 MAP2K1Q02750 393 aaPredicted RBP13.61□□□□□ -0.23
FCF1-202ENST00000534938 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
FCF1-202ENST00000534938 ZNF790Q6PG37 636 aa13.61□□□□□ -0.23
FCF1-202ENST00000534938 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
FCF1-202ENST00000534938 GAS2L2Q8NHY3 880 aa13.61□□□□□ -0.23
FCF1-202ENST00000534938 HACL1Q9UJ83 578 aa13.61□□□□□ -0.23
FCF1-202ENST00000534938 HEG1Q9ULI3 1381 aa13.6□□□□□ -0.23
FCF1-202ENST00000534938 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
FCF1-202ENST00000534938 SRGNP10124 158 aa13.6□□□□□ -0.23
FCF1-202ENST00000534938 HSPA5P11021 654 aaKnown RBP13.6□□□□□ -0.23
FCF1-202ENST00000534938 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
FCF1-202ENST00000534938 DZIP3Q86Y13 1208 aaKnown RBP13.6□□□□□ -0.23
FCF1-202ENST00000534938 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
FCF1-202ENST00000534938 TAF1DQ9H5J8 278 aaPredicted RBP13.6□□□□□ -0.23
FCF1-202ENST00000534938 ABT1Q9ULW3 272 aaKnown RBP13.6□□□□□ -0.23
FCF1-202ENST00000534938 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
FCF1-202ENST00000534938 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
FCF1-202ENST00000534938 VEGFBP49765 207 aa13.59□□□□□ -0.23
FCF1-202ENST00000534938 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
FCF1-202ENST00000534938 PAXIP1Q6ZW49 1069 aaPredicted RBP13.59□□□□□ -0.23
FCF1-202ENST00000534938 ZNF496Q96IT1 587 aaPredicted RBP13.59□□□□□ -0.23
FCF1-202ENST00000534938 L3MBTL3Q96JM7 780 aaPredicted RBP13.59□□□□□ -0.23
FCF1-202ENST00000534938 CLSPNQ9HAW4 1339 aa13.59□□□□□ -0.23
FCF1-202ENST00000534938 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 NPR1P16066 1061 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 LMOD1P29536 600 aaPredicted RBP13.58□□□□□ -0.24
FCF1-202ENST00000534938 EPHX2P34913 555 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 LBX1P52954 281 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 JDP2Q8WYK2 163 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 SCN7AQ01118 1682 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 FER1L6Q2WGJ9 1857 aa13.58□□□□□ -0.24
FCF1-202ENST00000534938 SCN4AP35499 1836 aa13.57□□□□□ -0.24
FCF1-202ENST00000534938 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
FCF1-202ENST00000534938 FKBP4Q02790 459 aaKnown RBP eCLIP13.57□□□□□ -0.24
FCF1-202ENST00000534938 PASKQ96RG2 1323 aa13.57□□□□□ -0.24
FCF1-202ENST00000534938 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
FCF1-202ENST00000534938 UBR2Q8IWV8 1755 aa13.56□□□□□ -0.24
FCF1-202ENST00000534938 BTBD11A6QL63 1104 aa13.56□□□□□ -0.24
FCF1-202ENST00000534938 ECE1P42892 770 aa13.56□□□□□ -0.24
FCF1-202ENST00000534938 CLEC4GQ6UXB4 293 aa13.56□□□□□ -0.24
FCF1-202ENST00000534938 CNTROBQ8N137 903 aa13.56□□□□□ -0.24
FCF1-202ENST00000534938 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
FCF1-202ENST00000534938 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
FCF1-202ENST00000534938 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
FCF1-202ENST00000534938 CAMTA2O94983 1202 aa13.55□□□□□ -0.24
FCF1-202ENST00000534938 A1BGP04217 495 aa13.55□□□□□ -0.24
FCF1-202ENST00000534938 EIF6P56537 245 aaKnown RBP13.55□□□□□ -0.24
FCF1-202ENST00000534938 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
FCF1-202ENST00000534938 ZNF277Q9NRM2 450 aaPredicted RBP13.55□□□□□ -0.24
FCF1-202ENST00000534938 WBP1LQ9NX94 342 aa13.55□□□□□ -0.24
FCF1-202ENST00000534938 COL11A2P13942 1736 aaPredicted RBP13.55□□□□□ -0.24
FCF1-202ENST00000534938 CACNA1SQ13698 1873 aa13.55□□□□□ -0.24
FCF1-202ENST00000534938 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
FCF1-202ENST00000534938 GPC2Q8N158 579 aa13.54□□□□□ -0.24
FCF1-202ENST00000534938 ABHD8Q96I13 439 aa13.54□□□□□ -0.24
FCF1-202ENST00000534938 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
FCF1-202ENST00000534938 WDR33Q9C0J8 1336 aaKnown RBP13.54□□□□□ -0.24
FCF1-202ENST00000534938 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
FCF1-202ENST00000534938 ITGBL1O95965 494 aaPredicted RBP13.53□□□□□ -0.24
FCF1-202ENST00000534938 IARSP41252 1262 aaKnown RBP13.53□□□□□ -0.24
FCF1-202ENST00000534938 GRM1Q13255 1194 aa13.53□□□□□ -0.24
FCF1-202ENST00000534938 MAP1SQ66K74 1059 aaPredicted RBP13.53□□□□□ -0.24
FCF1-202ENST00000534938 CFAP53Q96M91 514 aa13.53□□□□□ -0.24
FCF1-202ENST00000534938 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
FCF1-202ENST00000534938 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
FCF1-202ENST00000534938 CCDC85CA6NKD9 419 aa13.52□□□□□ -0.25
FCF1-202ENST00000534938 FAM177BA6PVY3 158 aa13.52□□□□□ -0.25
FCF1-202ENST00000534938 SNRPA1P09661 255 aaKnown RBP13.52□□□□□ -0.25
FCF1-202ENST00000534938 MLLT1Q03111 559 aaPredicted RBP13.52□□□□□ -0.25
FCF1-202ENST00000534938 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
FCF1-202ENST00000534938 GRIPAP1Q4V328 841 aa13.52□□□□□ -0.25
FCF1-202ENST00000534938 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.25
FCF1-202ENST00000534938 RPGRQ92834 1020 aaKnown RBP13.52□□□□□ -0.25
FCF1-202ENST00000534938 CFAP44Q96MT7 982 aa13.52□□□□□ -0.25
FCF1-202ENST00000534938 GJA3Q9Y6H8 435 aa13.52□□□□□ -0.25
FCF1-202ENST00000534938 ZNF541Q9H0D2 1346 aa13.52□□□□□ -0.25
FCF1-202ENST00000534938 ARFGEF2Q9Y6D5 1785 aa13.52□□□□□ -0.25
FCF1-202ENST00000534938 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
FCF1-202ENST00000534938 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
FCF1-202ENST00000534938 IL17REQ8NFR9 667 aa13.51□□□□□ -0.25
FCF1-202ENST00000534938 NYXQ9GZU5 481 aa13.51□□□□□ -0.25
FCF1-202ENST00000534938 RGL2O15211 777 aa13.5□□□□□ -0.25
FCF1-202ENST00000534938 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
FCF1-202ENST00000534938 CNGB1Q14028 1251 aaPredicted RBP13.5□□□□□ -0.25
FCF1-202ENST00000534938 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
FCF1-202ENST00000534938 FZD9O00144 591 aa13.49□□□□□ -0.25
FCF1-202ENST00000534938 NEFMP07197 916 aa13.49□□□□□ -0.25
FCF1-202ENST00000534938 C7orf43Q8WVR3 580 aa13.49□□□□□ -0.25
FCF1-202ENST00000534938 DDX21Q9NR30 783 aaKnown RBP eCLIP13.49□□□□□ -0.25
FCF1-202ENST00000534938 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
FCF1-202ENST00000534938 BCORQ6W2J9 1755 aa13.48□□□□□ -0.25
FCF1-202ENST00000534938 SLC34A2O95436 690 aa13.48□□□□□ -0.25
FCF1-202ENST00000534938 PIP4K2AP48426 406 aaPredicted RBP13.48□□□□□ -0.25
FCF1-202ENST00000534938 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms