RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 BEND3Q5T5X7 828 aa21.38■■□□□ 1.01
VPS51-216ENST00000534591 SIRT2Q8IXJ6 389 aa21.38■■□□□ 1.01
VPS51-216ENST00000534591 GNAI2P04899 355 aa21.37■■□□□ 1.01
VPS51-216ENST00000534591 TEX13AQ9BXU3 409 aaPredicted RBP21.37■■□□□ 1.01
VPS51-216ENST00000534591 ALDH1L1O75891 902 aa21.36■■□□□ 1.01
VPS51-216ENST00000534591 CEP85Q6P2H3 762 aa21.36■■□□□ 1.01
VPS51-216ENST00000534591 SKAP1Q86WV1 359 aa21.36■■□□□ 1.01
VPS51-216ENST00000534591 PTCD1O75127 700 aaKnown RBP21.35■■□□□ 1.01
VPS51-216ENST00000534591 LRP10Q7Z4F1 713 aa21.35■■□□□ 1.01
VPS51-216ENST00000534591 ATG3Q9NT62 314 aa21.35■■□□□ 1.01
VPS51-216ENST00000534591 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
VPS51-216ENST00000534591 MAP3K2Q9Y2U5 619 aa21.35■■□□□ 1.01
VPS51-216ENST00000534591 IBTKQ9P2D0 1353 aaPredicted RBP21.35■■□□□ 1.01
VPS51-216ENST00000534591 MYL6BP14649 208 aa21.34■■□□□ 1.01
VPS51-216ENST00000534591 RGS3P49796 1198 aa21.34■■□□□ 1.01
VPS51-216ENST00000534591 ZNF827Q17R98 1081 aa21.34■■□□□ 1.01
VPS51-216ENST00000534591 XAGE3Q8WTP9 111 aa21.34■■□□□ 1.01
VPS51-216ENST00000534591 USP44Q9H0E7 712 aa21.34■■□□□ 1.01
VPS51-216ENST00000534591 HMMRO75330 724 aa21.34■■□□□ 1.01
VPS51-216ENST00000534591 UBTFL1P0CB47 393 aaPredicted RBP21.33■■□□□ 1
VPS51-216ENST00000534591 NUCB1Q02818 461 aa21.33■■□□□ 1
VPS51-216ENST00000534591 AIMP1Q12904 312 aaKnown RBP21.33■■□□□ 1
VPS51-216ENST00000534591 COPS6Q7L5N1 327 aa21.33■■□□□ 1
VPS51-216ENST00000534591 SLC15A2Q16348 729 aa21.32■■□□□ 1
VPS51-216ENST00000534591 RIC3Q7Z5B4 369 aa21.32■■□□□ 1
VPS51-216ENST00000534591 LINS1Q8NG48 757 aa21.32■■□□□ 1
VPS51-216ENST00000534591 PALLDQ8WX93 1383 aa21.32■■□□□ 1
VPS51-216ENST00000534591 HDAC5Q9UQL6 1122 aa21.32■■□□□ 1
VPS51-216ENST00000534591 DCTPP1Q9H773 170 aa21.31■■□□□ 1
VPS51-216ENST00000534591 STK32BQ9NY57 414 aa21.31■■□□□ 1
VPS51-216ENST00000534591 ANKRD13DQ6ZTN6 518 aa21.3■■□□□ 1
VPS51-216ENST00000534591 C4BP0C0L5 1744 aa21.3■■□□□ 1
VPS51-216ENST00000534591 NBPF26B4DH59 902 aa21.29■■□□□ 1
VPS51-216ENST00000534591 NEXNQ0ZGT2 675 aa21.29■■□□□ 1
VPS51-216ENST00000534591 SLC27A3Q5K4L6 730 aa21.29■■□□□ 1
VPS51-216ENST00000534591 NBPF10Q6P3W6 841 aaKnown RBP21.29■■□□□ 1
VPS51-216ENST00000534591 NBPF15Q8N660 670 aa21.29■■□□□ 1
VPS51-216ENST00000534591 STARD3NLO95772 234 aa21.29■■□□□ 1
VPS51-216ENST00000534591 ATP8B2P98198 1209 aa21.29■■□□□ 1
VPS51-216ENST00000534591 CHD1LQ86WJ1 897 aa21.29■■□□□ 1
VPS51-216ENST00000534591 AKT1S1Q96B36 256 aa21.29■■□□□ 1
VPS51-216ENST00000534591 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
VPS51-216ENST00000534591 METTL22Q9BUU2 404 aaPredicted RBP21.29■■□□□ 1
VPS51-216ENST00000534591 CCNL1Q9UK58 526 aaPredicted RBP21.29■■□□□ 1
VPS51-216ENST00000534591 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
VPS51-216ENST00000534591 UBR3Q6ZT12 1888 aa21.29■■□□□ 1
VPS51-216ENST00000534591 A1BGP04217 495 aa21.28■■□□□ 1
VPS51-216ENST00000534591 PDE4AP27815 886 aa21.28■■□□□ 1
VPS51-216ENST00000534591 PLBD2Q8NHP8 589 aa21.28■■□□□ 1
VPS51-216ENST00000534591 COL5A3P25940 1745 aaPredicted RBP21.27■■□□□ 1
VPS51-216ENST00000534591 LRRFIP2Q9Y608 721 aaKnown RBP21.27■■□□□ 1
VPS51-216ENST00000534591 ANKRD45Q5TZF3 282 aa21.26■□□□□ 0.99
VPS51-216ENST00000534591 DNAJC10Q8IXB1 793 aa21.26■□□□□ 0.99
VPS51-216ENST00000534591 BACH2Q9BYV9 841 aa21.26■□□□□ 0.99
VPS51-216ENST00000534591 COL24A1Q17RW2 1714 aa21.26■□□□□ 0.99
VPS51-216ENST00000534591 UTYO14607 1347 aa21.26■□□□□ 0.99
VPS51-216ENST00000534591 PIP4K2AP48426 406 aaPredicted RBP21.25■□□□□ 0.99
VPS51-216ENST00000534591 C9orf78Q9NZ63 289 aaPredicted RBP21.25■□□□□ 0.99
VPS51-216ENST00000534591 ZBTB7AO95365 584 aa21.24■□□□□ 0.99
VPS51-216ENST00000534591 FAM161AQ3B820 660 aa21.24■□□□□ 0.99
VPS51-216ENST00000534591 SMARCC1Q92922 1105 aaPredicted RBP21.24■□□□□ 0.99
VPS51-216ENST00000534591 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
VPS51-216ENST00000534591 IGKV5-2P06315 115 aa21.24■□□□□ 0.99
VPS51-216ENST00000534591 NBPF7P0C2Y1 421 aaPredicted RBP21.24■□□□□ 0.99
VPS51-216ENST00000534591 NEURL1BA8MQ27 555 aa21.23■□□□□ 0.99
VPS51-216ENST00000534591 GRM8O00222 908 aa21.23■□□□□ 0.99
VPS51-216ENST00000534591 CWF19L2Q2TBE0 894 aaKnown RBP21.23■□□□□ 0.99
VPS51-216ENST00000534591 MYD88Q99836 296 aa21.23■□□□□ 0.99
VPS51-216ENST00000534591 LNPKQ9C0E8 428 aa21.23■□□□□ 0.99
VPS51-216ENST00000534591 ZBTB47Q9UFB7 747 aaPredicted RBP21.23■□□□□ 0.99
VPS51-216ENST00000534591 TJP1Q07157 1748 aa21.23■□□□□ 0.99
VPS51-216ENST00000534591 ARFGEF2Q9Y6D5 1785 aa21.22■□□□□ 0.99
VPS51-216ENST00000534591 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
VPS51-216ENST00000534591 CYP19A1P11511 503 aaPredicted RBP21.22■□□□□ 0.99
VPS51-216ENST00000534591 SSH3Q8TE77 659 aa21.21■□□□□ 0.99
VPS51-216ENST00000534591 SLC4A9Q96Q91 983 aa21.21■□□□□ 0.99
VPS51-216ENST00000534591 MYH14Q7Z406 1995 aaKnown RBP21.21■□□□□ 0.99
VPS51-216ENST00000534591 MTX1Q13505 466 aa21.2■□□□□ 0.98
VPS51-216ENST00000534591 GCKRQ14397 625 aa21.2■□□□□ 0.98
VPS51-216ENST00000534591 SPON1Q9HCB6 807 aa21.2■□□□□ 0.98
VPS51-216ENST00000534591 CICQ96RK0 1608 aaPredicted RBP21.2■□□□□ 0.98
VPS51-216ENST00000534591 PNMA6EA0A0J9YXQ4 647 aa21.19■□□□□ 0.98
VPS51-216ENST00000534591 POLA2Q14181 598 aa21.19■□□□□ 0.98
VPS51-216ENST00000534591 TTLL7Q6ZT98 887 aa21.19■□□□□ 0.98
VPS51-216ENST00000534591 ATF5Q9Y2D1 282 aaPredicted RBP21.19■□□□□ 0.98
VPS51-216ENST00000534591 LOC102724428A0A0B4J2F2 783 aa21.19■□□□□ 0.98
VPS51-216ENST00000534591 SIK1P57059 783 aa21.19■□□□□ 0.98
VPS51-216ENST00000534591 AMIGO3Q86WK7 504 aa21.19■□□□□ 0.98
VPS51-216ENST00000534591 PTGER2P43116 358 aa21.18■□□□□ 0.98
VPS51-216ENST00000534591 ITPK1Q13572 414 aa21.18■□□□□ 0.98
VPS51-216ENST00000534591 C8orf34Q49A92 452 aa21.18■□□□□ 0.98
VPS51-216ENST00000534591 PPP1R42Q7Z4L9 355 aa21.18■□□□□ 0.98
VPS51-216ENST00000534591 TFCP2L1Q9NZI6 479 aa21.18■□□□□ 0.98
VPS51-216ENST00000534591 SMIM5Q71RC9 77 aa21.17■□□□□ 0.98
VPS51-216ENST00000534591 LINC00116Q8NCU8 138 aa21.17■□□□□ 0.98
VPS51-216ENST00000534591 COL15A1P39059 1388 aa21.16■□□□□ 0.98
VPS51-216ENST00000534591 KIF6Q6ZMV9 814 aa21.16■□□□□ 0.98
VPS51-216ENST00000534591 AFDNP55196 1824 aaKnown RBP21.16■□□□□ 0.98
VPS51-216ENST00000534591 SRGAP3O43295 1099 aa21.15■□□□□ 0.98
VPS51-216ENST00000534591 C4AP0C0L4 1744 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms