RNA–Protein interactions for RNA: ENST00000534498.1

PGAP2-237, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 4

Gene PGAP2, Length 463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-237ENST00000534498 VAMP4O75379 141 aa18.52■□□□□ 0.56
PGAP2-237ENST00000534498 TM4SF1P30408 202 aa18.52■□□□□ 0.56
PGAP2-237ENST00000534498 NFIXQ14938 502 aa18.52■□□□□ 0.56
PGAP2-237ENST00000534498 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.56
PGAP2-237ENST00000534498 BICDL1Q6ZP65 573 aa18.52■□□□□ 0.56
PGAP2-237ENST00000534498 TSPYL6Q8N831 410 aa18.52■□□□□ 0.56
PGAP2-237ENST00000534498 STK31Q9BXU1 1019 aa18.52■□□□□ 0.56
PGAP2-237ENST00000534498 POLRMTO00411 1230 aaKnown RBP18.51■□□□□ 0.55
PGAP2-237ENST00000534498 KRT24Q2M2I5 525 aa18.51■□□□□ 0.55
PGAP2-237ENST00000534498 BCL2L12Q9HB09 334 aa18.51■□□□□ 0.55
PGAP2-237ENST00000534498 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
PGAP2-237ENST00000534498 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
PGAP2-237ENST00000534498 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
PGAP2-237ENST00000534498 KIF13BQ9NQT8 1826 aa18.5■□□□□ 0.55
PGAP2-237ENST00000534498 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
PGAP2-237ENST00000534498 KIF16BQ96L93 1317 aa18.49■□□□□ 0.55
PGAP2-237ENST00000534498 SERPINB2P05120 415 aa18.49■□□□□ 0.55
PGAP2-237ENST00000534498 DPEP1P16444 411 aa18.49■□□□□ 0.55
PGAP2-237ENST00000534498 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
PGAP2-237ENST00000534498 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.49■□□□□ 0.55
PGAP2-237ENST00000534498 N4BP2Q86UW6 1770 aaPredicted RBP18.48■□□□□ 0.55
PGAP2-237ENST00000534498 BCS1LQ9Y276 419 aa18.48■□□□□ 0.55
PGAP2-237ENST00000534498 NPHP1O15259 732 aa18.47■□□□□ 0.55
PGAP2-237ENST00000534498 TBC1D9BQ66K14 1250 aa18.47■□□□□ 0.55
PGAP2-237ENST00000534498 DBF4Q9UBU7 674 aaPredicted RBP18.47■□□□□ 0.55
PGAP2-237ENST00000534498 CAMTA2O94983 1202 aa18.46■□□□□ 0.55
PGAP2-237ENST00000534498 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
PGAP2-237ENST00000534498 ZNF652Q9Y2D9 606 aa18.46■□□□□ 0.55
PGAP2-237ENST00000534498 SCN7AQ01118 1682 aa18.46■□□□□ 0.55
PGAP2-237ENST00000534498 NBPF26B4DH59 902 aa18.45■□□□□ 0.54
PGAP2-237ENST00000534498 NBPF10Q6P3W6 841 aaKnown RBP18.45■□□□□ 0.54
PGAP2-237ENST00000534498 NBPF15Q8N660 670 aa18.45■□□□□ 0.54
PGAP2-237ENST00000534498 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
PGAP2-237ENST00000534498 SETDB2Q96T68 719 aa18.45■□□□□ 0.54
PGAP2-237ENST00000534498 PIM2Q9P1W9 311 aa18.45■□□□□ 0.54
PGAP2-237ENST00000534498 CHRNA5P30532 468 aa18.44■□□□□ 0.54
PGAP2-237ENST00000534498 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
PGAP2-237ENST00000534498 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
PGAP2-237ENST00000534498 AFDNP55196 1824 aaKnown RBP18.44■□□□□ 0.54
PGAP2-237ENST00000534498 CARMIL3Q8ND23 1372 aa18.43■□□□□ 0.54
PGAP2-237ENST00000534498 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
PGAP2-237ENST00000534498 IPO8O15397 1037 aaKnown RBP18.43■□□□□ 0.54
PGAP2-237ENST00000534498 MYL6BP14649 208 aa18.43■□□□□ 0.54
PGAP2-237ENST00000534498 ZNF784Q8NCA9 323 aaPredicted RBP18.43■□□□□ 0.54
PGAP2-237ENST00000534498 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
PGAP2-237ENST00000534498 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
PGAP2-237ENST00000534498 HYPKQ9NX55 129 aa18.43■□□□□ 0.54
PGAP2-237ENST00000534498 CHPF2Q9P2E5 772 aa18.43■□□□□ 0.54
PGAP2-237ENST00000534498 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
PGAP2-237ENST00000534498 DDX21Q9NR30 783 aaKnown RBP eCLIP18.42■□□□□ 0.54
PGAP2-237ENST00000534498 PTPRCP08575 1304 aa18.42■□□□□ 0.54
PGAP2-237ENST00000534498 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
PGAP2-237ENST00000534498 MS4A1P11836 297 aa18.41■□□□□ 0.54
PGAP2-237ENST00000534498 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
PGAP2-237ENST00000534498 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
PGAP2-237ENST00000534498 ARHGAP27Q6ZUM4 889 aa18.41■□□□□ 0.54
PGAP2-237ENST00000534498 MRPL50Q8N5N7 158 aaKnown RBP18.41■□□□□ 0.54
PGAP2-237ENST00000534498 BCORQ6W2J9 1755 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 BCAR3O75815 825 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 KCNA3P22001 575 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 ST5P78524 1137 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 ZKSCAN2Q63HK3 967 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 C2CD5Q86YS7 1000 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 CCDC24Q8N4L8 307 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 CNBD1Q8NA66 436 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
PGAP2-237ENST00000534498 H0YIN7 160 aa18.39■□□□□ 0.53
PGAP2-237ENST00000534498 ARHGAP45Q92619 1136 aa18.39■□□□□ 0.53
PGAP2-237ENST00000534498 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
PGAP2-237ENST00000534498 NIP7Q9Y221 180 aaKnown RBP eCLIP18.39■□□□□ 0.53
PGAP2-237ENST00000534498 TCERG1O14776 1098 aaKnown RBP18.38■□□□□ 0.53
PGAP2-237ENST00000534498 DDX58O95786 925 aaKnown RBP18.38■□□□□ 0.53
PGAP2-237ENST00000534498 FLIIQ13045 1269 aa18.38■□□□□ 0.53
PGAP2-237ENST00000534498 PRR5LQ6MZQ0 368 aa18.38■□□□□ 0.53
PGAP2-237ENST00000534498 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
PGAP2-237ENST00000534498 API5Q9BZZ5 524 aaKnown RBP18.38■□□□□ 0.53
PGAP2-237ENST00000534498 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
PGAP2-237ENST00000534498 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
PGAP2-237ENST00000534498 FAM177BA6PVY3 158 aa18.37■□□□□ 0.53
PGAP2-237ENST00000534498 NEFLP07196 543 aa18.37■□□□□ 0.53
PGAP2-237ENST00000534498 PDE6BP35913 854 aa18.37■□□□□ 0.53
PGAP2-237ENST00000534498 FTSJ3Q8IY81 847 aaKnown RBP18.37■□□□□ 0.53
PGAP2-237ENST00000534498 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
PGAP2-237ENST00000534498 FKBP5Q13451 457 aaPredicted RBP18.36■□□□□ 0.53
PGAP2-237ENST00000534498 HLFQ16534 295 aa18.36■□□□□ 0.53
PGAP2-237ENST00000534498 ATF7IPQ6VMQ6 1270 aa18.36■□□□□ 0.53
PGAP2-237ENST00000534498 TTLL7Q6ZT98 887 aa18.36■□□□□ 0.53
PGAP2-237ENST00000534498 ZNF622Q969S3 477 aaKnown RBP eCLIP18.36■□□□□ 0.53
PGAP2-237ENST00000534498 BRIP1Q9BX63 1249 aa18.36■□□□□ 0.53
PGAP2-237ENST00000534498 NOB1Q9ULX3 412 aaKnown RBP18.36■□□□□ 0.53
PGAP2-237ENST00000534498 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
PGAP2-237ENST00000534498 RGL2O15211 777 aa18.35■□□□□ 0.53
PGAP2-237ENST00000534498 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
PGAP2-237ENST00000534498 PDIA6Q15084 440 aa18.35■□□□□ 0.53
PGAP2-237ENST00000534498 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
PGAP2-237ENST00000534498 ZBTB3Q9H5J0 574 aa18.35■□□□□ 0.53
PGAP2-237ENST00000534498 PDZRN3Q9UPQ7 1066 aa18.35■□□□□ 0.53
PGAP2-237ENST00000534498 UTRNP46939 3433 aa18.35■□□□□ 0.53
PGAP2-237ENST00000534498 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms