RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TPM3P06753 285 aa22.92■■□□□ 1.26
SMPD1-210ENST00000534405 GNAI3P08754 354 aa22.92■■□□□ 1.26
SMPD1-210ENST00000534405 ATP8B2P98198 1209 aa22.92■■□□□ 1.26
SMPD1-210ENST00000534405 C14orf37Q86TY3 774 aa22.92■■□□□ 1.26
SMPD1-210ENST00000534405 CHAMP1Q96JM3 812 aa22.92■■□□□ 1.26
SMPD1-210ENST00000534405 LRRCC1Q9C099 1032 aa22.92■■□□□ 1.26
SMPD1-210ENST00000534405 LRRFIP2Q9Y608 721 aaKnown RBP22.92■■□□□ 1.26
SMPD1-210ENST00000534405 TUBGCP6Q96RT7 1819 aa22.91■■□□□ 1.26
SMPD1-210ENST00000534405 RBM33Q96EV2 1170 aaKnown RBP22.91■■□□□ 1.26
SMPD1-210ENST00000534405 USP44Q9H0E7 712 aa22.91■■□□□ 1.26
SMPD1-210ENST00000534405 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
SMPD1-210ENST00000534405 FAM53CQ9NYF3 392 aa22.9■■□□□ 1.26
SMPD1-210ENST00000534405 PYCARDQ9ULZ3 195 aa22.9■■□□□ 1.26
SMPD1-210ENST00000534405 YY1AP1Q9H869 796 aa22.9■■□□□ 1.26
SMPD1-210ENST00000534405 KCNF1Q9H3M0 494 aa22.89■■□□□ 1.26
SMPD1-210ENST00000534405 CACNA1FO60840 1977 aa22.89■■□□□ 1.25
SMPD1-210ENST00000534405 MX1P20591 662 aa22.89■■□□□ 1.25
SMPD1-210ENST00000534405 CERS3Q8IU89 383 aa22.88■■□□□ 1.25
SMPD1-210ENST00000534405 HDGFL1Q5TGJ6 251 aa22.88■■□□□ 1.25
SMPD1-210ENST00000534405 FEZ2Q9UHY8 353 aaPredicted RBP22.88■■□□□ 1.25
SMPD1-210ENST00000534405 LTN1O94822 1766 aa22.88■■□□□ 1.25
SMPD1-210ENST00000534405 N4BP2Q86UW6 1770 aaPredicted RBP22.87■■□□□ 1.25
SMPD1-210ENST00000534405 SMTNL1A8MU46 457 aa22.87■■□□□ 1.25
SMPD1-210ENST00000534405 ST18O60284 1047 aa22.87■■□□□ 1.25
SMPD1-210ENST00000534405 BABAM1Q9NWV8 329 aa22.87■■□□□ 1.25
SMPD1-210ENST00000534405 PHF8Q9UPP1 1060 aa22.87■■□□□ 1.25
SMPD1-210ENST00000534405 KDM4AO75164 1064 aa22.87■■□□□ 1.25
SMPD1-210ENST00000534405 SOS1Q07889 1333 aaPredicted RBP22.86■■□□□ 1.25
SMPD1-210ENST00000534405 NBPF6Q5VWK0 638 aa22.86■■□□□ 1.25
SMPD1-210ENST00000534405 NBPF4Q96M43 638 aa22.86■■□□□ 1.25
SMPD1-210ENST00000534405 ESYT1Q9BSJ8 1104 aa22.86■■□□□ 1.25
SMPD1-210ENST00000534405 EFCC1Q9HA90 598 aa22.86■■□□□ 1.25
SMPD1-210ENST00000534405 CEMIPQ8WUJ3 1361 aa22.86■■□□□ 1.25
SMPD1-210ENST00000534405 LGR6Q9HBX8 967 aa22.86■■□□□ 1.25
SMPD1-210ENST00000534405 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
SMPD1-210ENST00000534405 PXDNLA1KZ92 1463 aa22.85■■□□□ 1.25
SMPD1-210ENST00000534405 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
SMPD1-210ENST00000534405 IP6K1Q92551 441 aa22.84■■□□□ 1.25
SMPD1-210ENST00000534405 ERICH4A6NGS2 130 aa22.84■■□□□ 1.25
SMPD1-210ENST00000534405 BRD1O95696 1058 aa22.84■■□□□ 1.25
SMPD1-210ENST00000534405 UBTFL1P0CB47 393 aaPredicted RBP22.84■■□□□ 1.25
SMPD1-210ENST00000534405 MMP14P50281 582 aa22.83■■□□□ 1.25
SMPD1-210ENST00000534405 RILPL2Q969X0 211 aa22.83■■□□□ 1.25
SMPD1-210ENST00000534405 STAP2Q9UGK3 403 aa22.83■■□□□ 1.25
SMPD1-210ENST00000534405 PALD1Q9ULE6 856 aa22.83■■□□□ 1.25
SMPD1-210ENST00000534405 EIF2S2P20042 333 aaKnown RBP22.83■■□□□ 1.25
SMPD1-210ENST00000534405 CHMLP26374 656 aa22.83■■□□□ 1.25
SMPD1-210ENST00000534405 IL1RAPL2Q9NP60 686 aa22.83■■□□□ 1.25
SMPD1-210ENST00000534405 NFAT5O94916 1531 aa22.83■■□□□ 1.24
SMPD1-210ENST00000534405 KCNQ3O43525 872 aa22.82■■□□□ 1.24
SMPD1-210ENST00000534405 SSH3Q8TE77 659 aa22.82■■□□□ 1.24
SMPD1-210ENST00000534405 GEMIN8Q9NWZ8 242 aaKnown RBP22.82■■□□□ 1.24
SMPD1-210ENST00000534405 EIF4A1P60842 406 aaKnown RBP22.81■■□□□ 1.24
SMPD1-210ENST00000534405 MED1Q15648 1581 aaPredicted RBP22.81■■□□□ 1.24
SMPD1-210ENST00000534405 NEK4P51957 841 aa22.81■■□□□ 1.24
SMPD1-210ENST00000534405 ZNF397Q8NF99 534 aaPredicted RBP22.8■■□□□ 1.24
SMPD1-210ENST00000534405 IL25Q9H293 177 aa22.8■■□□□ 1.24
SMPD1-210ENST00000534405 CYP2C19P33261 490 aa22.8■■□□□ 1.24
SMPD1-210ENST00000534405 PPP1R42Q7Z4L9 355 aa22.8■■□□□ 1.24
SMPD1-210ENST00000534405 KLHL34Q8N239 644 aa22.8■■□□□ 1.24
SMPD1-210ENST00000534405 CHPF2Q9P2E5 772 aa22.8■■□□□ 1.24
SMPD1-210ENST00000534405 RGPD2P0DJD1 1756 aa22.8■■□□□ 1.24
SMPD1-210ENST00000534405 CHD2O14647 1828 aaKnown RBP22.79■■□□□ 1.24
SMPD1-210ENST00000534405 LRRC59Q96AG4 307 aaKnown RBP22.79■■□□□ 1.24
SMPD1-210ENST00000534405 NBPF7P0C2Y1 421 aaPredicted RBP22.79■■□□□ 1.24
SMPD1-210ENST00000534405 CCDC183Q5T5S1 534 aa22.79■■□□□ 1.24
SMPD1-210ENST00000534405 NUTM1Q86Y26 1132 aa22.79■■□□□ 1.24
SMPD1-210ENST00000534405 SRCIN1Q9C0H9 1055 aa22.79■■□□□ 1.24
SMPD1-210ENST00000534405 ANO2Q9NQ90 1003 aa22.79■■□□□ 1.24
SMPD1-210ENST00000534405 PAXBP1Q9Y5B6 917 aa22.79■■□□□ 1.24
SMPD1-210ENST00000534405 GOLGA6L6A8MZA4 724 aa22.78■■□□□ 1.24
SMPD1-210ENST00000534405 ANXA1P04083 346 aa22.78■■□□□ 1.24
SMPD1-210ENST00000534405 HCLS1P14317 486 aaPredicted RBP22.78■■□□□ 1.24
SMPD1-210ENST00000534405 TMX3Q96JJ7 454 aa22.78■■□□□ 1.24
SMPD1-210ENST00000534405 RNF216Q9NWF9 866 aaPredicted RBP22.78■■□□□ 1.24
SMPD1-210ENST00000534405 BRD2P25440 801 aaKnown RBP22.77■■□□□ 1.24
SMPD1-210ENST00000534405 HNRNPH2P55795 449 aaKnown RBP22.77■■□□□ 1.24
SMPD1-210ENST00000534405 POLA2Q14181 598 aa22.77■■□□□ 1.24
SMPD1-210ENST00000534405 FOXD4L5Q5VV16 416 aaPredicted RBP22.77■■□□□ 1.24
SMPD1-210ENST00000534405 FOXD4L4Q8WXT5 416 aaPredicted RBP22.77■■□□□ 1.24
SMPD1-210ENST00000534405 NAA30Q147X3 362 aaPredicted RBP22.77■■□□□ 1.24
SMPD1-210ENST00000534405 ESCO1Q5FWF5 840 aa22.77■■□□□ 1.24
SMPD1-210ENST00000534405 KDM3BQ7LBC6 1761 aa22.77■■□□□ 1.23
SMPD1-210ENST00000534405 GADD45BO75293 160 aaPredicted RBP22.76■■□□□ 1.23
SMPD1-210ENST00000534405 SURF6O75683 361 aaKnown RBP22.76■■□□□ 1.23
SMPD1-210ENST00000534405 PI4KAP2A4QPH2 592 aa22.76■■□□□ 1.23
SMPD1-210ENST00000534405 RAD51AP2Q09MP3 1159 aa22.76■■□□□ 1.23
SMPD1-210ENST00000534405 KMT5BQ4FZB7 885 aa22.76■■□□□ 1.23
SMPD1-210ENST00000534405 PI4KAP1Q8N8J0 262 aa22.76■■□□□ 1.23
SMPD1-210ENST00000534405 PSME1Q06323 249 aa22.75■■□□□ 1.23
SMPD1-210ENST00000534405 BEND3Q5T5X7 828 aa22.75■■□□□ 1.23
SMPD1-210ENST00000534405 MAP4K4O95819 1239 aaPredicted RBP22.74■■□□□ 1.23
SMPD1-210ENST00000534405 MPRIPQ6WCQ1 1025 aa22.74■■□□□ 1.23
SMPD1-210ENST00000534405 CCDC112Q8NEF3 446 aa22.74■■□□□ 1.23
SMPD1-210ENST00000534405 KIF1BPQ96EK5 621 aa22.74■■□□□ 1.23
SMPD1-210ENST00000534405 SRGAP3O43295 1099 aa22.74■■□□□ 1.23
SMPD1-210ENST00000534405 AP5Z1O43299 807 aa22.74■■□□□ 1.23
SMPD1-210ENST00000534405 RHPN1Q8TCX5 695 aa22.74■■□□□ 1.23
SMPD1-210ENST00000534405 AOX1Q06278 1338 aa22.74■■□□□ 1.23
SMPD1-210ENST00000534405 DNAAF4Q8WXU2 420 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms