RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 TOMM70O94826 608 aa16.04■□□□□ 0.16
CHRDL2-209ENST00000534276 RASSF7Q02833 373 aa16.04■□□□□ 0.16
CHRDL2-209ENST00000534276 CLEC4GQ6UXB4 293 aa16.04■□□□□ 0.16
CHRDL2-209ENST00000534276 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHRDL2-209ENST00000534276 NPHP1O15259 732 aa16.02■□□□□ 0.16
CHRDL2-209ENST00000534276 LMNB1P20700 586 aa16.02■□□□□ 0.16
CHRDL2-209ENST00000534276 PRELPP51888 382 aa16.02■□□□□ 0.16
CHRDL2-209ENST00000534276 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
CHRDL2-209ENST00000534276 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
CHRDL2-209ENST00000534276 KDM2BQ8NHM5 1336 aa16.02■□□□□ 0.16
CHRDL2-209ENST00000534276 DLEC1Q9Y238 1755 aa16.02■□□□□ 0.15
CHRDL2-209ENST00000534276 RGL2O15211 777 aa16.02■□□□□ 0.15
CHRDL2-209ENST00000534276 ST5P78524 1137 aa16.02■□□□□ 0.15
CHRDL2-209ENST00000534276 RUNDC1Q96C34 613 aa16.02■□□□□ 0.15
CHRDL2-209ENST00000534276 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
CHRDL2-209ENST00000534276 NFKBIEO00221 500 aa16.01■□□□□ 0.15
CHRDL2-209ENST00000534276 NBPF5PQ86XG9 351 aaPredicted RBP16.01■□□□□ 0.15
CHRDL2-209ENST00000534276 ZC3H4Q9UPT8 1303 aaKnown RBP16.01■□□□□ 0.15
CHRDL2-209ENST00000534276 ANKRD31Q8N7Z5 1873 aa16■□□□□ 0.15
CHRDL2-209ENST00000534276 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
CHRDL2-209ENST00000534276 BCORQ6W2J9 1755 aa15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 SBF1O95248 1867 aa15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 C21orf2O43822 256 aa15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 SRGNP10124 158 aa15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 STYK1Q6J9G0 422 aa15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 RBM46Q8TBY0 533 aaKnown RBP15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 CNKSR1Q969H4 720 aa15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 NIP7Q9Y221 180 aaKnown RBP eCLIP15.99■□□□□ 0.15
CHRDL2-209ENST00000534276 HLFQ16534 295 aa15.98■□□□□ 0.15
CHRDL2-209ENST00000534276 C16orf71Q8IYS4 520 aaPredicted RBP15.98■□□□□ 0.15
CHRDL2-209ENST00000534276 MASTLQ96GX5 879 aa15.98■□□□□ 0.15
CHRDL2-209ENST00000534276 RRAGCQ9HB90 399 aa15.98■□□□□ 0.15
CHRDL2-209ENST00000534276 TPTE2Q6XPS3 522 aa15.97■□□□□ 0.15
CHRDL2-209ENST00000534276 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
CHRDL2-209ENST00000534276 DLG5Q8TDM6 1919 aa15.97■□□□□ 0.15
CHRDL2-209ENST00000534276 GLTPD2A6NH11 291 aa15.96■□□□□ 0.15
CHRDL2-209ENST00000534276 APLP1P51693 650 aa15.96■□□□□ 0.15
CHRDL2-209ENST00000534276 RIPK4P57078 832 aa15.96■□□□□ 0.15
CHRDL2-209ENST00000534276 CCDC27Q2M243 656 aa15.96■□□□□ 0.15
CHRDL2-209ENST00000534276 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
CHRDL2-209ENST00000534276 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
CHRDL2-209ENST00000534276 COL11A2P13942 1736 aaPredicted RBP15.96■□□□□ 0.15
CHRDL2-209ENST00000534276 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
CHRDL2-209ENST00000534276 ERVV-1B6SEH8 477 aa15.95■□□□□ 0.14
CHRDL2-209ENST00000534276 APAF1O14727 1248 aa15.95■□□□□ 0.14
CHRDL2-209ENST00000534276 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
CHRDL2-209ENST00000534276 LTBP3Q9NS15 1303 aa15.95■□□□□ 0.14
CHRDL2-209ENST00000534276 FAM177BA6PVY3 158 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 TMPOP42166 694 aaKnown RBP15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 FSTL1Q12841 308 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 TAOK3Q9H2K8 898 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 TSPYL4Q9UJ04 414 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 NPR1P16066 1061 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 SOGA3Q5TF21 947 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 TTLL7Q6ZT98 887 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 C7orf43Q8WVR3 580 aa15.94■□□□□ 0.14
CHRDL2-209ENST00000534276 LAMB4A4D0S4 1761 aa15.93■□□□□ 0.14
CHRDL2-209ENST00000534276 CEP350Q5VT06 3117 aa15.93■□□□□ 0.14
CHRDL2-209ENST00000534276 MYL6BP14649 208 aa15.93■□□□□ 0.14
CHRDL2-209ENST00000534276 ERFEQ4G0M1 354 aa15.93■□□□□ 0.14
CHRDL2-209ENST00000534276 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
CHRDL2-209ENST00000534276 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
CHRDL2-209ENST00000534276 BABAM1Q9NWV8 329 aa15.93■□□□□ 0.14
CHRDL2-209ENST00000534276 SLX4Q8IY92 1834 aa15.92■□□□□ 0.14
CHRDL2-209ENST00000534276 ERBB4Q15303 1308 aa15.92■□□□□ 0.14
CHRDL2-209ENST00000534276 VEGFAP15692 232 aaPredicted RBP15.92■□□□□ 0.14
CHRDL2-209ENST00000534276 GTF2E1P29083 439 aaPredicted RBP15.92■□□□□ 0.14
CHRDL2-209ENST00000534276 GOLGA2Q08379 1002 aa15.92■□□□□ 0.14
CHRDL2-209ENST00000534276 LMOD3Q0VAK6 560 aa15.92■□□□□ 0.14
CHRDL2-209ENST00000534276 TNRC6CQ9HCJ0 1690 aaKnown RBP15.91■□□□□ 0.14
CHRDL2-209ENST00000534276 DPY19L2Q6NUT2 758 aa15.91■□□□□ 0.14
CHRDL2-209ENST00000534276 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
CHRDL2-209ENST00000534276 NYXQ9GZU5 481 aa15.91■□□□□ 0.14
CHRDL2-209ENST00000534276 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
CHRDL2-209ENST00000534276 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
CHRDL2-209ENST00000534276 CCDC93Q567U6 631 aa15.9■□□□□ 0.14
CHRDL2-209ENST00000534276 NUTM1Q86Y26 1132 aa15.9■□□□□ 0.14
CHRDL2-209ENST00000534276 DNAJC5GQ8N7S2 189 aa15.9■□□□□ 0.14
CHRDL2-209ENST00000534276 SMC1BQ8NDV3 1235 aa15.9■□□□□ 0.14
CHRDL2-209ENST00000534276 FER1L6Q2WGJ9 1857 aa15.9■□□□□ 0.14
CHRDL2-209ENST00000534276 POTECB2RU33 542 aa15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 EIF2S2P20042 333 aaKnown RBP15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 GPTP24298 496 aa15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 PDIA6Q15084 440 aa15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 LRP10Q7Z4F1 713 aa15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 TRMT2AQ8IZ69 625 aaKnown RBP15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 ABCC12Q96J65 1359 aa15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 UBN2Q6ZU65 1347 aa15.89■□□□□ 0.13
CHRDL2-209ENST00000534276 E9PSI1 815 aa15.88■□□□□ 0.13
CHRDL2-209ENST00000534276 ALDH1B1P30837 517 aa15.88■□□□□ 0.13
CHRDL2-209ENST00000534276 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
CHRDL2-209ENST00000534276 CRY2Q49AN0 593 aa15.88■□□□□ 0.13
CHRDL2-209ENST00000534276 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
CHRDL2-209ENST00000534276 ZNF34Q8IZ26 560 aa15.88■□□□□ 0.13
CHRDL2-209ENST00000534276 SALL2Q9Y467 1007 aaPredicted RBP15.88■□□□□ 0.13
CHRDL2-209ENST00000534276 TIAM2Q8IVF5 1701 aa15.88■□□□□ 0.13
CHRDL2-209ENST00000534276 CCDC88AQ3V6T2 1871 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms