RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 TTC21AQ8NDW8 1320 aa8.29□□□□□ -1.08
CMTM1-220ENST00000534143 TRPM3Q9HCF6 1732 aaPredicted RBP8.29□□□□□ -1.08
CMTM1-220ENST00000534143 FOXO3O43524 673 aa8.29□□□□□ -1.08
CMTM1-220ENST00000534143 CNGB1Q14028 1251 aaPredicted RBP8.29□□□□□ -1.08
CMTM1-220ENST00000534143 CCDC184Q52MB2 194 aa8.29□□□□□ -1.08
CMTM1-220ENST00000534143 MYSM1Q5VVJ2 828 aa8.29□□□□□ -1.08
CMTM1-220ENST00000534143 BRINP3Q76B58 766 aa8.29□□□□□ -1.08
CMTM1-220ENST00000534143 NME9Q86XW9 330 aa8.29□□□□□ -1.08
CMTM1-220ENST00000534143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.29□□□□□ -1.08
CMTM1-220ENST00000534143 CCDC24Q8N4L8 307 aa8.29□□□□□ -1.08
CMTM1-220ENST00000534143 GGNBP2Q9H3C7 697 aa8.29□□□□□ -1.08
CMTM1-220ENST00000534143 MYBBP1AQ9BQG0 1328 aaKnown RBP8.29□□□□□ -1.08
CMTM1-220ENST00000534143 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
CMTM1-220ENST00000534143 USP31Q70CQ4 1352 aa8.28□□□□□ -1.08
CMTM1-220ENST00000534143 PPP2R1AP30153 589 aa8.28□□□□□ -1.08
CMTM1-220ENST00000534143 PSME1Q06323 249 aa8.28□□□□□ -1.08
CMTM1-220ENST00000534143 PRPF38BQ5VTL8 546 aaKnown RBP8.28□□□□□ -1.08
CMTM1-220ENST00000534143 KRT28Q7Z3Y7 464 aa8.28□□□□□ -1.08
CMTM1-220ENST00000534143 MORC1Q86VD1 984 aa8.28□□□□□ -1.08
CMTM1-220ENST00000534143 PRR7Q8TB68 274 aa8.28□□□□□ -1.08
CMTM1-220ENST00000534143 KDM4CQ9H3R0 1056 aa8.28□□□□□ -1.08
CMTM1-220ENST00000534143 GPBP1L1Q9HC44 474 aaPredicted RBP8.28□□□□□ -1.08
CMTM1-220ENST00000534143 MARF1Q9Y4F3 1742 aaKnown RBP8.28□□□□□ -1.08
CMTM1-220ENST00000534143 PIK3C2AO00443 1686 aa8.27□□□□□ -1.08
CMTM1-220ENST00000534143 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
CMTM1-220ENST00000534143 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
CMTM1-220ENST00000534143 NUDT12Q9BQG2 462 aa8.27□□□□□ -1.09
CMTM1-220ENST00000534143 ZBTB3Q9H5J0 574 aa8.27□□□□□ -1.09
CMTM1-220ENST00000534143 PKD2L1Q9P0L9 805 aa8.27□□□□□ -1.09
CMTM1-220ENST00000534143 COL16A1Q07092 1604 aaPredicted RBP8.27□□□□□ -1.09
CMTM1-220ENST00000534143 OVOS2A0A0J9YW53 1432 aa8.27□□□□□ -1.09
CMTM1-220ENST00000534143 OVOS2Q6IE36 1432 aa8.27□□□□□ -1.09
CMTM1-220ENST00000534143 NPHP3Q7Z494 1330 aa8.27□□□□□ -1.09
CMTM1-220ENST00000534143 MAP2P11137 1827 aaKnown RBP8.26□□□□□ -1.09
CMTM1-220ENST00000534143 SBNO1A3KN83 1393 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 NHSL1Q5SYE7 1610 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 TNFRSF10AO00220 468 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 TRIM32Q13049 653 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 NLRP13Q86W25 1043 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 DDX17Q92841 729 aaKnown RBP8.26□□□□□ -1.09
CMTM1-220ENST00000534143 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 LIMD1Q9UGP4 676 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 ALS2Q96Q42 1657 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 SOS2Q07890 1332 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-220ENST00000534143 PXDNQ92626 1479 aa8.26□□□□□ -1.09
CMTM1-220ENST00000534143 XPCQ01831 940 aaPredicted RBP8.25□□□□□ -1.09
CMTM1-220ENST00000534143 FOXC1Q12948 553 aa8.25□□□□□ -1.09
CMTM1-220ENST00000534143 PTPRNQ16849 979 aa8.25□□□□□ -1.09
CMTM1-220ENST00000534143 TRAF7Q6Q0C0 670 aa8.25□□□□□ -1.09
CMTM1-220ENST00000534143 ABTB2Q8N961 1025 aa8.25□□□□□ -1.09
CMTM1-220ENST00000534143 COG3Q96JB2 828 aa8.25□□□□□ -1.09
CMTM1-220ENST00000534143 AATKQ6ZMQ8 1374 aa8.24□□□□□ -1.09
CMTM1-220ENST00000534143 LCE2BO14633 110 aa8.24□□□□□ -1.09
CMTM1-220ENST00000534143 CSPP1Q1MSJ5 1256 aa8.24□□□□□ -1.09
CMTM1-220ENST00000534143 PTCRAQ6ISU1 281 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-220ENST00000534143 MRS2Q9HD23 443 aa8.24□□□□□ -1.09
CMTM1-220ENST00000534143 EVA1BQ9NVM1 165 aa8.24□□□□□ -1.09
CMTM1-220ENST00000534143 RGS17Q9UGC6 210 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-220ENST00000534143 SPATA31A3Q5VYP0 1347 aa8.24□□□□□ -1.09
CMTM1-220ENST00000534143 AHDC1Q5TGY3 1603 aaPredicted RBP8.23□□□□□ -1.09
CMTM1-220ENST00000534143 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 LILRB3O75022 631 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 CCNYL3P0C7X3 344 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 FBLN1P23142 703 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 TNNT2P45379 298 aaPredicted RBP8.23□□□□□ -1.09
CMTM1-220ENST00000534143 CLK2P49760 499 aaKnown RBP8.23□□□□□ -1.09
CMTM1-220ENST00000534143 MTHFSP49914 203 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 CABLES1Q8TDN4 633 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 PNISRQ8TF01 805 aaKnown RBP8.23□□□□□ -1.09
CMTM1-220ENST00000534143 DDRGK1Q96HY6 314 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 FAM117AQ9C073 453 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 POLKQ9UBT6 870 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 SHPRHQ149N8 1683 aa8.23□□□□□ -1.09
CMTM1-220ENST00000534143 INSRP06213 1382 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 TNS3Q68CZ2 1445 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 WNT7AO00755 349 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 DGAT1O75907 488 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 QPCTQ16769 361 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 NUTM2GQ5VZR2 741 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 SLIT3O75094 1523 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 USP19O94966 1318 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 PNPLA6Q8IY17 1366 aa8.22□□□□□ -1.09
CMTM1-220ENST00000534143 SMG6Q86US8 1419 aaKnown RBP8.21□□□□□ -1.09
CMTM1-220ENST00000534143 CRYBG1Q9Y4K1 1723 aa8.21□□□□□ -1.09
CMTM1-220ENST00000534143 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
CMTM1-220ENST00000534143 LYPD8Q6UX82 237 aa8.21□□□□□ -1.1
CMTM1-220ENST00000534143 POLR3EQ9NVU0 708 aa8.21□□□□□ -1.1
CMTM1-220ENST00000534143 TOR4AQ9NXH8 423 aa8.21□□□□□ -1.1
CMTM1-220ENST00000534143 LRP6O75581 1613 aa8.21□□□□□ -1.1
CMTM1-220ENST00000534143 COL3A1P02461 1466 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-220ENST00000534143 NFAT5O94916 1531 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 NUTM2BA6NNL0 878 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-220ENST00000534143 NUTM2EB1AL46 878 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-220ENST00000534143 WNT7BP56706 349 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 SKOR1P84550 965 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 SKIV2LQ15477 1246 aaKnown RBP8.2□□□□□ -1.1
CMTM1-220ENST00000534143 PKDCCQ504Y2 493 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 POTEAQ6S8J7 498 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 NUTM2AQ8IVF1 878 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms