RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 GPTP24298 496 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 SIK1P57059 783 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
RTL1-201ENST00000534062 BEND3Q5T5X7 828 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 RGS12O14924 1447 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 SRGAP3O43295 1099 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 RPAP2Q8IXW5 612 aaPredicted RBP11.85□□□□□ -0.51
RTL1-201ENST00000534062 LINS1Q8NG48 757 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
RTL1-201ENST00000534062 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 ADCY9O60503 1353 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 BACH2Q9BYV9 841 aa11.85□□□□□ -0.51
RTL1-201ENST00000534062 A0A087WZG4 1122 aa11.84□□□□□ -0.51
RTL1-201ENST00000534062 SMARCC1Q92922 1105 aaPredicted RBP11.84□□□□□ -0.51
RTL1-201ENST00000534062 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
RTL1-201ENST00000534062 SMARCA5O60264 1052 aaPredicted RBP11.84□□□□□ -0.51
RTL1-201ENST00000534062 ANKRD44Q8N8A2 993 aa11.84□□□□□ -0.51
RTL1-201ENST00000534062 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
RTL1-201ENST00000534062 PALLDQ8WX93 1383 aa11.84□□□□□ -0.51
RTL1-201ENST00000534062 BCL9O00512 1426 aa11.84□□□□□ -0.51
RTL1-201ENST00000534062 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
RTL1-201ENST00000534062 GRM8O00222 908 aa11.83□□□□□ -0.52
RTL1-201ENST00000534062 SIRT2Q8IXJ6 389 aa11.83□□□□□ -0.52
RTL1-201ENST00000534062 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
RTL1-201ENST00000534062 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
RTL1-201ENST00000534062 PLBD2Q8NHP8 589 aa11.83□□□□□ -0.52
RTL1-201ENST00000534062 CCDC85AQ96PX6 553 aaPredicted RBP11.83□□□□□ -0.52
RTL1-201ENST00000534062 GCC1Q96CN9 775 aa11.83□□□□□ -0.52
RTL1-201ENST00000534062 SLC4A9Q96Q91 983 aa11.83□□□□□ -0.52
RTL1-201ENST00000534062 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
RTL1-201ENST00000534062 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
RTL1-201ENST00000534062 NPHP1O15259 732 aa11.82□□□□□ -0.52
RTL1-201ENST00000534062 ALDH1L1O75891 902 aa11.82□□□□□ -0.52
RTL1-201ENST00000534062 ZNF772Q68DY9 489 aaPredicted RBP11.82□□□□□ -0.52
RTL1-201ENST00000534062 CHD1LQ86WJ1 897 aa11.82□□□□□ -0.52
RTL1-201ENST00000534062 SIL1Q9H173 461 aa11.82□□□□□ -0.52
RTL1-201ENST00000534062 KRT27Q7Z3Y8 459 aa11.82□□□□□ -0.52
RTL1-201ENST00000534062 DZIP3Q86Y13 1208 aaKnown RBP11.82□□□□□ -0.52
RTL1-201ENST00000534062 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
RTL1-201ENST00000534062 TRIM37O94972 964 aa11.82□□□□□ -0.52
RTL1-201ENST00000534062 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
RTL1-201ENST00000534062 CCNL1Q9UK58 526 aaPredicted RBP11.82□□□□□ -0.52
RTL1-201ENST00000534062 MRC1P22897 1456 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 NEURL1BA8MQ27 555 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
RTL1-201ENST00000534062 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 IGKV5-2P06315 115 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 ERBB4Q15303 1308 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 PHF14O94880 888 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
RTL1-201ENST00000534062 GCKRQ14397 625 aa11.8□□□□□ -0.52
RTL1-201ENST00000534062 SMC5Q8IY18 1101 aa11.8□□□□□ -0.52
RTL1-201ENST00000534062 CWC25Q9NXE8 425 aaPredicted RBP11.8□□□□□ -0.52
RTL1-201ENST00000534062 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
RTL1-201ENST00000534062 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
RTL1-201ENST00000534062 PDE4CQ08493 712 aa11.8□□□□□ -0.52
RTL1-201ENST00000534062 ITPK1Q13572 414 aa11.8□□□□□ -0.52
RTL1-201ENST00000534062 SUCLG2Q96I99 432 aa11.8□□□□□ -0.52
RTL1-201ENST00000534062 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
RTL1-201ENST00000534062 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
RTL1-201ENST00000534062 RXRBP28702 533 aa11.79□□□□□ -0.52
RTL1-201ENST00000534062 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
RTL1-201ENST00000534062 PA2G4Q9UQ80 394 aaKnown RBP11.79□□□□□ -0.52
RTL1-201ENST00000534062 GTF2E1P29083 439 aaPredicted RBP11.79□□□□□ -0.52
RTL1-201ENST00000534062 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
RTL1-201ENST00000534062 GNPATO15228 680 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 NUCB1Q02818 461 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 DCTPP1Q9H773 170 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 HLFQ16534 295 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 FAM89AQ96GI7 184 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 SIPA1L3O60292 1781 aaPredicted RBP11.78□□□□□ -0.52
RTL1-201ENST00000534062 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 TRMT112Q9UI30 125 aaKnown RBP11.78□□□□□ -0.52
RTL1-201ENST00000534062 PRDM4Q9UKN5 801 aa11.78□□□□□ -0.52
RTL1-201ENST00000534062 C5P01031 1676 aa11.77□□□□□ -0.52
RTL1-201ENST00000534062 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.52
RTL1-201ENST00000534062 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.52
RTL1-201ENST00000534062 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
RTL1-201ENST00000534062 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.53
RTL1-201ENST00000534062 KCPQ6ZWJ8 1503 aa11.77□□□□□ -0.53
RTL1-201ENST00000534062 DOT1LQ8TEK3 1739 aa11.77□□□□□ -0.53
RTL1-201ENST00000534062 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.53
RTL1-201ENST00000534062 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
RTL1-201ENST00000534062 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
RTL1-201ENST00000534062 AK7Q96M32 723 aa11.76□□□□□ -0.53
RTL1-201ENST00000534062 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
RTL1-201ENST00000534062 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
RTL1-201ENST00000534062 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
RTL1-201ENST00000534062 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms