RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 TIAM2Q8IVF5 1701 aa22.47■■□□□ 1.19
CAPRIN1-216ENST00000534042 BCORQ6W2J9 1755 aa22.47■■□□□ 1.19
CAPRIN1-216ENST00000534042 DCTN1Q14203 1278 aa22.46■■□□□ 1.19
CAPRIN1-216ENST00000534042 CLEC4GQ6UXB4 293 aa22.46■■□□□ 1.19
CAPRIN1-216ENST00000534042 FER1L6Q2WGJ9 1857 aa22.45■■□□□ 1.19
CAPRIN1-216ENST00000534042 STYK1Q6J9G0 422 aa22.45■■□□□ 1.18
CAPRIN1-216ENST00000534042 DPY19L2Q6NUT2 758 aa22.45■■□□□ 1.18
CAPRIN1-216ENST00000534042 KLRG1Q96E93 195 aa22.45■■□□□ 1.18
CAPRIN1-216ENST00000534042 ZNF652Q9Y2D9 606 aa22.45■■□□□ 1.18
CAPRIN1-216ENST00000534042 DICER1Q9UPY3 1922 aaKnown RBP22.45■■□□□ 1.18
CAPRIN1-216ENST00000534042 SRGNP10124 158 aa22.44■■□□□ 1.18
CAPRIN1-216ENST00000534042 ERFEQ4G0M1 354 aa22.44■■□□□ 1.18
CAPRIN1-216ENST00000534042 NBPF5PQ86XG9 351 aaPredicted RBP22.44■■□□□ 1.18
CAPRIN1-216ENST00000534042 SLX4Q8IY92 1834 aa22.44■■□□□ 1.18
CAPRIN1-216ENST00000534042 CACNA1SQ13698 1873 aa22.43■■□□□ 1.18
CAPRIN1-216ENST00000534042 TAF7Q15545 349 aaPredicted RBP22.43■■□□□ 1.18
CAPRIN1-216ENST00000534042 MASTLQ96GX5 879 aa22.43■■□□□ 1.18
CAPRIN1-216ENST00000534042 TAOK3Q9H2K8 898 aa22.43■■□□□ 1.18
CAPRIN1-216ENST00000534042 NEFMP07197 916 aa22.42■■□□□ 1.18
CAPRIN1-216ENST00000534042 PRPF40BQ6NWY9 871 aaKnown RBP22.42■■□□□ 1.18
CAPRIN1-216ENST00000534042 LTBP3Q9NS15 1303 aa22.41■■□□□ 1.18
CAPRIN1-216ENST00000534042 NBPF26B4DH59 902 aa22.41■■□□□ 1.18
CAPRIN1-216ENST00000534042 SOGA3Q5TF21 947 aa22.41■■□□□ 1.18
CAPRIN1-216ENST00000534042 NBPF10Q6P3W6 841 aaKnown RBP22.41■■□□□ 1.18
CAPRIN1-216ENST00000534042 NBPF15Q8N660 670 aa22.41■■□□□ 1.18
CAPRIN1-216ENST00000534042 RGL2O15211 777 aa22.39■■□□□ 1.17
CAPRIN1-216ENST00000534042 TPTE2Q6XPS3 522 aa22.39■■□□□ 1.17
CAPRIN1-216ENST00000534042 MIS18AQ9NYP9 233 aa22.39■■□□□ 1.17
CAPRIN1-216ENST00000534042 NIP7Q9Y221 180 aaKnown RBP eCLIP22.39■■□□□ 1.17
CAPRIN1-216ENST00000534042 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
CAPRIN1-216ENST00000534042 POTECB2RU33 542 aa22.38■■□□□ 1.17
CAPRIN1-216ENST00000534042 JMYQ8N9B5 988 aa22.38■■□□□ 1.17
CAPRIN1-216ENST00000534042 DLG5Q8TDM6 1919 aa22.37■■□□□ 1.17
CAPRIN1-216ENST00000534042 NPR1P16066 1061 aa22.37■■□□□ 1.17
CAPRIN1-216ENST00000534042 PNISRQ8TF01 805 aaKnown RBP22.37■■□□□ 1.17
CAPRIN1-216ENST00000534042 FAM177BA6PVY3 158 aa22.35■■□□□ 1.17
CAPRIN1-216ENST00000534042 KLRG2A4D1S0 409 aaPredicted RBP22.34■■□□□ 1.17
CAPRIN1-216ENST00000534042 HLFQ16534 295 aa22.34■■□□□ 1.17
CAPRIN1-216ENST00000534042 CCDC93Q567U6 631 aa22.34■■□□□ 1.17
CAPRIN1-216ENST00000534042 C7orf43Q8WVR3 580 aa22.34■■□□□ 1.17
CAPRIN1-216ENST00000534042 LAMB4A4D0S4 1761 aa22.33■■□□□ 1.17
CAPRIN1-216ENST00000534042 DDNO94850 711 aaPredicted RBP22.33■■□□□ 1.17
CAPRIN1-216ENST00000534042 GTF2E1P29083 439 aaPredicted RBP22.33■■□□□ 1.17
CAPRIN1-216ENST00000534042 NGEFQ8N5V2 710 aa22.32■■□□□ 1.16
CAPRIN1-216ENST00000534042 NFE2L2Q16236 605 aa22.31■■□□□ 1.16
CAPRIN1-216ENST00000534042 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
CAPRIN1-216ENST00000534042 PNNQ9H307 717 aaKnown RBP22.31■■□□□ 1.16
CAPRIN1-216ENST00000534042 KDM3BQ7LBC6 1761 aa22.3■■□□□ 1.16
CAPRIN1-216ENST00000534042 EIF4A1P60842 406 aaKnown RBP22.3■■□□□ 1.16
CAPRIN1-216ENST00000534042 RRP7AQ9Y3A4 280 aaKnown RBP22.3■■□□□ 1.16
CAPRIN1-216ENST00000534042 NUP98P52948 1817 aa22.29■■□□□ 1.16
CAPRIN1-216ENST00000534042 ERVV-1B6SEH8 477 aa22.29■■□□□ 1.16
CAPRIN1-216ENST00000534042 ALDH1B1P30837 517 aa22.29■■□□□ 1.16
CAPRIN1-216ENST00000534042 FKBP4Q02790 459 aaKnown RBP eCLIP22.29■■□□□ 1.16
CAPRIN1-216ENST00000534042 CHADLQ6NUI6 762 aa22.29■■□□□ 1.16
CAPRIN1-216ENST00000534042 THUMPD2Q9BTF0 503 aaKnown RBP22.29■■□□□ 1.16
CAPRIN1-216ENST00000534042 NYXQ9GZU5 481 aa22.29■■□□□ 1.16
CAPRIN1-216ENST00000534042 MAPK8IP3Q9UPT6 1336 aa22.29■■□□□ 1.16
CAPRIN1-216ENST00000534042 KIF6Q6ZMV9 814 aa22.28■■□□□ 1.16
CAPRIN1-216ENST00000534042 RTKN2Q8IZC4 609 aa22.28■■□□□ 1.16
CAPRIN1-216ENST00000534042 MAP3K15Q6ZN16 1313 aa22.28■■□□□ 1.16
CAPRIN1-216ENST00000534042 IQCA1LA6NCM1 817 aa22.27■■□□□ 1.16
CAPRIN1-216ENST00000534042 ZNF277Q9NRM2 450 aaPredicted RBP22.27■■□□□ 1.16
CAPRIN1-216ENST00000534042 MYL6BP14649 208 aa22.26■■□□□ 1.15
CAPRIN1-216ENST00000534042 OLFM4Q6UX06 510 aa22.26■■□□□ 1.15
CAPRIN1-216ENST00000534042 TTLL7Q6ZT98 887 aa22.26■■□□□ 1.15
CAPRIN1-216ENST00000534042 SCN4AP35499 1836 aa22.25■■□□□ 1.15
CAPRIN1-216ENST00000534042 POTEIP0CG38 1075 aa22.25■■□□□ 1.15
CAPRIN1-216ENST00000534042 POTEJP0CG39 1038 aa22.25■■□□□ 1.15
CAPRIN1-216ENST00000534042 NUTM1Q86Y26 1132 aa22.25■■□□□ 1.15
CAPRIN1-216ENST00000534042 L3MBTL3Q96JM7 780 aaPredicted RBP22.25■■□□□ 1.15
CAPRIN1-216ENST00000534042 COL13A1Q5TAT6 717 aaPredicted RBP22.24■■□□□ 1.15
CAPRIN1-216ENST00000534042 ABCC12Q96J65 1359 aa22.24■■□□□ 1.15
CAPRIN1-216ENST00000534042 GPTP24298 496 aa22.23■■□□□ 1.15
CAPRIN1-216ENST00000534042 CRY2Q49AN0 593 aa22.23■■□□□ 1.15
CAPRIN1-216ENST00000534042 SYNE4Q8N205 404 aa22.23■■□□□ 1.15
CAPRIN1-216ENST00000534042 ZBTB3Q9H5J0 574 aa22.23■■□□□ 1.15
CAPRIN1-216ENST00000534042 TAF1DQ9H5J8 278 aaPredicted RBP22.23■■□□□ 1.15
CAPRIN1-216ENST00000534042 IARSP41252 1262 aaKnown RBP22.22■■□□□ 1.15
CAPRIN1-216ENST00000534042 LDHDQ86WU2 507 aa22.22■■□□□ 1.15
CAPRIN1-216ENST00000534042 CREBZFQ9NS37 354 aa22.22■■□□□ 1.15
CAPRIN1-216ENST00000534042 ERBB4Q15303 1308 aa22.22■■□□□ 1.15
CAPRIN1-216ENST00000534042 ZNF541Q9H0D2 1346 aa22.22■■□□□ 1.15
CAPRIN1-216ENST00000534042 RPGRQ92834 1020 aaKnown RBP22.21■■□□□ 1.15
CAPRIN1-216ENST00000534042 TSPYL4Q9UJ04 414 aa22.21■■□□□ 1.15
CAPRIN1-216ENST00000534042 HSPA1AP0DMV8 641 aaKnown RBP22.2■■□□□ 1.14
CAPRIN1-216ENST00000534042 HSPA1BP0DMV9 641 aaKnown RBP22.2■■□□□ 1.14
CAPRIN1-216ENST00000534042 SUSD4Q5VX71 490 aa22.2■■□□□ 1.14
CAPRIN1-216ENST00000534042 CC2D2BQ6DHV5 1058 aa22.2■■□□□ 1.14
CAPRIN1-216ENST00000534042 PSMD1Q99460 953 aa22.2■■□□□ 1.14
CAPRIN1-216ENST00000534042 HACL1Q9UJ83 578 aa22.2■■□□□ 1.14
CAPRIN1-216ENST00000534042 UBN2Q6ZU65 1347 aa22.2■■□□□ 1.14
CAPRIN1-216ENST00000534042 IBTKQ9P2D0 1353 aaPredicted RBP22.2■■□□□ 1.14
CAPRIN1-216ENST00000534042 RIPK4P57078 832 aa22.19■■□□□ 1.14
CAPRIN1-216ENST00000534042 GIGYF2Q6Y7W6 1299 aaKnown RBP22.19■■□□□ 1.14
CAPRIN1-216ENST00000534042 ZNF34Q8IZ26 560 aa22.19■■□□□ 1.14
CAPRIN1-216ENST00000534042 FZD9O00144 591 aa22.18■■□□□ 1.14
CAPRIN1-216ENST00000534042 HOXA10P31260 410 aaPredicted RBP22.18■■□□□ 1.14
CAPRIN1-216ENST00000534042 RALBP1Q15311 655 aa22.18■■□□□ 1.14
CAPRIN1-216ENST00000534042 EAPPQ56P03 285 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms