RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 C2CD5Q86YS7 1000 aa12.81□□□□□ -0.36
SOX9-AS1-213ENST00000533996 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
SOX9-AS1-213ENST00000533996 SCN11AQ9UI33 1791 aa12.8□□□□□ -0.36
SOX9-AS1-213ENST00000533996 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
SOX9-AS1-213ENST00000533996 VEGFBP49765 207 aa12.8□□□□□ -0.36
SOX9-AS1-213ENST00000533996 RGS19P49795 217 aa12.8□□□□□ -0.36
SOX9-AS1-213ENST00000533996 LBX1P52954 281 aa12.8□□□□□ -0.36
SOX9-AS1-213ENST00000533996 C1orf141Q5JVX7 400 aa12.8□□□□□ -0.36
SOX9-AS1-213ENST00000533996 LDHDQ86WU2 507 aa12.8□□□□□ -0.36
SOX9-AS1-213ENST00000533996 ABHD8Q96I13 439 aa12.8□□□□□ -0.36
SOX9-AS1-213ENST00000533996 PDE6BP35913 854 aa12.78□□□□□ -0.36
SOX9-AS1-213ENST00000533996 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
SOX9-AS1-213ENST00000533996 MLLT1Q03111 559 aaPredicted RBP12.78□□□□□ -0.36
SOX9-AS1-213ENST00000533996 SPRYD3Q8NCJ5 442 aa12.78□□□□□ -0.36
SOX9-AS1-213ENST00000533996 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
SOX9-AS1-213ENST00000533996 COL15A1P39059 1388 aa12.78□□□□□ -0.36
SOX9-AS1-213ENST00000533996 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ITGBL1O95965 494 aaPredicted RBP12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 SOGA3Q5TF21 947 aa12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ANKRD31Q8N7Z5 1873 aa12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 RASSF10A6NK89 507 aa12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 STK25O00506 426 aa12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 C21orf2O43822 256 aa12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 HSPA8P11142 646 aaKnown RBP12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 BCL2L12Q9HB09 334 aa12.76□□□□□ -0.37
SOX9-AS1-213ENST00000533996 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
SOX9-AS1-213ENST00000533996 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
SOX9-AS1-213ENST00000533996 TAF1DQ9H5J8 278 aaPredicted RBP12.75□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ARFGEF2Q9Y6D5 1785 aa12.75□□□□□ -0.37
SOX9-AS1-213ENST00000533996 A0A087WZG4 1122 aa12.74□□□□□ -0.37
SOX9-AS1-213ENST00000533996 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
SOX9-AS1-213ENST00000533996 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
SOX9-AS1-213ENST00000533996 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
SOX9-AS1-213ENST00000533996 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.72□□□□□ -0.37
SOX9-AS1-213ENST00000533996 STYK1Q6J9G0 422 aa12.72□□□□□ -0.37
SOX9-AS1-213ENST00000533996 PNMA8AQ86V59 439 aaPredicted RBP12.72□□□□□ -0.37
SOX9-AS1-213ENST00000533996 ZFP91Q96JP5 570 aaPredicted RBP12.72□□□□□ -0.37
SOX9-AS1-213ENST00000533996 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
SOX9-AS1-213ENST00000533996 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
SOX9-AS1-213ENST00000533996 COL11A2P13942 1736 aaPredicted RBP12.71□□□□□ -0.37
SOX9-AS1-213ENST00000533996 CCDC85CA6NKD9 419 aa12.71□□□□□ -0.37
SOX9-AS1-213ENST00000533996 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
SOX9-AS1-213ENST00000533996 HACL1Q9UJ83 578 aa12.71□□□□□ -0.37
SOX9-AS1-213ENST00000533996 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
SOX9-AS1-213ENST00000533996 PRR5LQ6MZQ0 368 aa12.7□□□□□ -0.38
SOX9-AS1-213ENST00000533996 BICDL1Q6ZP65 573 aa12.7□□□□□ -0.38
SOX9-AS1-213ENST00000533996 CNTROBQ8N137 903 aa12.7□□□□□ -0.38
SOX9-AS1-213ENST00000533996 MRC1P22897 1456 aa12.7□□□□□ -0.38
SOX9-AS1-213ENST00000533996 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
SOX9-AS1-213ENST00000533996 STARD3NLO95772 234 aa12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 SRGNP10124 158 aa12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 EPHX2P34913 555 aa12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 ECE1P42892 770 aa12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 TNNT2P45379 298 aaPredicted RBP12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 EAPPQ56P03 285 aaPredicted RBP12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 TBC1D9BQ66K14 1250 aa12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 MASTLQ96GX5 879 aa12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
SOX9-AS1-213ENST00000533996 SCN7AQ01118 1682 aa12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 RNMTO43148 476 aaKnown RBP12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 CANXP27824 592 aaKnown RBP12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 SLC39A6Q13433 755 aa12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 SULT6B1Q6IMI4 303 aa12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
SOX9-AS1-213ENST00000533996 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
SOX9-AS1-213ENST00000533996 ST5P78524 1137 aa12.67□□□□□ -0.38
SOX9-AS1-213ENST00000533996 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
SOX9-AS1-213ENST00000533996 PDAP1Q13442 181 aaKnown RBP12.67□□□□□ -0.38
SOX9-AS1-213ENST00000533996 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
SOX9-AS1-213ENST00000533996 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
SOX9-AS1-213ENST00000533996 ABT1Q9ULW3 272 aaKnown RBP12.67□□□□□ -0.38
SOX9-AS1-213ENST00000533996 TRPM7Q96QT4 1865 aa12.66□□□□□ -0.38
SOX9-AS1-213ENST00000533996 MAP2K2P36507 400 aa12.66□□□□□ -0.38
SOX9-AS1-213ENST00000533996 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
SOX9-AS1-213ENST00000533996 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
SOX9-AS1-213ENST00000533996 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
SOX9-AS1-213ENST00000533996 FZD9O00144 591 aa12.65□□□□□ -0.38
SOX9-AS1-213ENST00000533996 NPHP1O15259 732 aa12.65□□□□□ -0.38
SOX9-AS1-213ENST00000533996 CA12O43570 354 aa12.65□□□□□ -0.38
SOX9-AS1-213ENST00000533996 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
SOX9-AS1-213ENST00000533996 MAP1SQ66K74 1059 aaPredicted RBP12.65□□□□□ -0.38
SOX9-AS1-213ENST00000533996 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms