RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
BEST3-207ENST00000533674 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
BEST3-207ENST00000533674 USP42Q9H9J4 1324 aaKnown RBP12.31□□□□□ -0.44
BEST3-207ENST00000533674 KCPQ6ZWJ8 1503 aa12.31□□□□□ -0.44
BEST3-207ENST00000533674 TNRC6CQ9HCJ0 1690 aaKnown RBP12.3□□□□□ -0.44
BEST3-207ENST00000533674 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
BEST3-207ENST00000533674 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
BEST3-207ENST00000533674 PANK3Q9H999 370 aa12.3□□□□□ -0.44
BEST3-207ENST00000533674 TJP1Q07157 1748 aa12.3□□□□□ -0.44
BEST3-207ENST00000533674 KCNA3P22001 575 aa12.29□□□□□ -0.44
BEST3-207ENST00000533674 CHRNA5P30532 468 aa12.29□□□□□ -0.44
BEST3-207ENST00000533674 EIF4G2P78344 907 aaKnown RBP eCLIP12.29□□□□□ -0.44
BEST3-207ENST00000533674 FSTL1Q12841 308 aa12.29□□□□□ -0.44
BEST3-207ENST00000533674 RRAGCQ9HB90 399 aa12.29□□□□□ -0.44
BEST3-207ENST00000533674 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
BEST3-207ENST00000533674 DDR1Q08345 913 aa12.28□□□□□ -0.44
BEST3-207ENST00000533674 USPL1Q5W0Q7 1092 aa12.28□□□□□ -0.44
BEST3-207ENST00000533674 DNAJC5GQ8N7S2 189 aa12.28□□□□□ -0.44
BEST3-207ENST00000533674 KNSTRNQ9Y448 316 aa12.28□□□□□ -0.44
BEST3-207ENST00000533674 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
BEST3-207ENST00000533674 POLRMTO00411 1230 aaKnown RBP12.27□□□□□ -0.45
BEST3-207ENST00000533674 HTRA3P83110 453 aa12.27□□□□□ -0.45
BEST3-207ENST00000533674 KLRG1Q96E93 195 aa12.27□□□□□ -0.45
BEST3-207ENST00000533674 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.45
BEST3-207ENST00000533674 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
BEST3-207ENST00000533674 LCE2DQ5TA82 110 aaPredicted RBP12.26□□□□□ -0.45
BEST3-207ENST00000533674 DNAJC10Q8IXB1 793 aa12.26□□□□□ -0.45
BEST3-207ENST00000533674 MICALL2Q8IY33 904 aa12.26□□□□□ -0.45
BEST3-207ENST00000533674 SMC1BQ8NDV3 1235 aa12.26□□□□□ -0.45
BEST3-207ENST00000533674 HSPA5P11021 654 aaKnown RBP12.25□□□□□ -0.45
BEST3-207ENST00000533674 RASSF7Q02833 373 aa12.25□□□□□ -0.45
BEST3-207ENST00000533674 INTS5Q6P9B9 1019 aaKnown RBP12.25□□□□□ -0.45
BEST3-207ENST00000533674 FAM163AQ96GL9 167 aaPredicted RBP12.25□□□□□ -0.45
BEST3-207ENST00000533674 SLC52A2Q9HAB3 445 aa12.25□□□□□ -0.45
BEST3-207ENST00000533674 COL15A1P39059 1388 aa12.25□□□□□ -0.45
BEST3-207ENST00000533674 LMNB1P20700 586 aa12.24□□□□□ -0.45
BEST3-207ENST00000533674 TM4SF1P30408 202 aa12.24□□□□□ -0.45
BEST3-207ENST00000533674 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
BEST3-207ENST00000533674 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
BEST3-207ENST00000533674 ZC3H4Q9UPT8 1303 aaKnown RBP12.23□□□□□ -0.45
BEST3-207ENST00000533674 NPHP1O15259 732 aa12.23□□□□□ -0.45
BEST3-207ENST00000533674 SERPINB2P05120 415 aa12.23□□□□□ -0.45
BEST3-207ENST00000533674 SLC39A6Q13433 755 aa12.23□□□□□ -0.45
BEST3-207ENST00000533674 TTC5Q8N0Z6 440 aa12.23□□□□□ -0.45
BEST3-207ENST00000533674 NARFQ9UHQ1 456 aa12.23□□□□□ -0.45
BEST3-207ENST00000533674 SBF1O95248 1867 aa12.23□□□□□ -0.45
BEST3-207ENST00000533674 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
BEST3-207ENST00000533674 H0YIN7 160 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 RNMTO43148 476 aaKnown RBP12.22□□□□□ -0.45
BEST3-207ENST00000533674 HMOX1P09601 288 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 CYP19A1P11511 503 aaPredicted RBP12.22□□□□□ -0.45
BEST3-207ENST00000533674 VEGFAP15692 232 aaPredicted RBP12.22□□□□□ -0.45
BEST3-207ENST00000533674 CANXP27824 592 aaKnown RBP12.22□□□□□ -0.45
BEST3-207ENST00000533674 IL13P35225 146 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 NFIXQ14938 502 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 BICDL1Q6ZP65 573 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 NPM2Q86SE8 214 aaKnown RBP12.22□□□□□ -0.45
BEST3-207ENST00000533674 C2CD5Q86YS7 1000 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 TTLL6Q8N841 843 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 LGR6Q9HBX8 967 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 ZBTB1Q9Y2K1 713 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 ZNF330Q9Y3S2 320 aaPredicted RBP12.22□□□□□ -0.45
BEST3-207ENST00000533674 AFDNP55196 1824 aaKnown RBP12.22□□□□□ -0.45
BEST3-207ENST00000533674 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
BEST3-207ENST00000533674 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
BEST3-207ENST00000533674 DLEC1Q9Y238 1755 aa12.21□□□□□ -0.45
BEST3-207ENST00000533674 SNPHO15079 494 aa12.21□□□□□ -0.45
BEST3-207ENST00000533674 COL13A1Q5TAT6 717 aaPredicted RBP12.21□□□□□ -0.45
BEST3-207ENST00000533674 TNS4Q8IZW8 715 aa12.21□□□□□ -0.45
BEST3-207ENST00000533674 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
BEST3-207ENST00000533674 MRC1P22897 1456 aa12.21□□□□□ -0.46
BEST3-207ENST00000533674 A0A087WZG4 1122 aa12.2□□□□□ -0.46
BEST3-207ENST00000533674 GLTPD2A6NH11 291 aa12.2□□□□□ -0.46
BEST3-207ENST00000533674 STARD3NLO95772 234 aa12.2□□□□□ -0.46
BEST3-207ENST00000533674 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.46
BEST3-207ENST00000533674 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
BEST3-207ENST00000533674 NRXN2Q9P2S2 1712 aa12.19□□□□□ -0.46
BEST3-207ENST00000533674 POTEMA6NI47 508 aa12.18□□□□□ -0.46
BEST3-207ENST00000533674 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
BEST3-207ENST00000533674 PDE6BP35913 854 aa12.18□□□□□ -0.46
BEST3-207ENST00000533674 TEFQ10587 303 aa12.18□□□□□ -0.46
BEST3-207ENST00000533674 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
BEST3-207ENST00000533674 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
BEST3-207ENST00000533674 CARMIL3Q8ND23 1372 aa12.17□□□□□ -0.46
BEST3-207ENST00000533674 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
BEST3-207ENST00000533674 UBR2Q8IWV8 1755 aa12.16□□□□□ -0.46
BEST3-207ENST00000533674 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
BEST3-207ENST00000533674 C21orf2O43822 256 aa12.16□□□□□ -0.46
BEST3-207ENST00000533674 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
BEST3-207ENST00000533674 ERFEQ4G0M1 354 aa12.16□□□□□ -0.46
BEST3-207ENST00000533674 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
BEST3-207ENST00000533674 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
BEST3-207ENST00000533674 NFKBIEO00221 500 aa12.15□□□□□ -0.46
BEST3-207ENST00000533674 ST18O60284 1047 aa12.15□□□□□ -0.46
BEST3-207ENST00000533674 HSPA1AP0DMV8 641 aaKnown RBP12.15□□□□□ -0.46
BEST3-207ENST00000533674 HSPA1BP0DMV9 641 aaKnown RBP12.15□□□□□ -0.46
BEST3-207ENST00000533674 ST5P78524 1137 aa12.15□□□□□ -0.46
BEST3-207ENST00000533674 CC2D1BQ5T0F9 858 aaKnown RBP12.15□□□□□ -0.46
BEST3-207ENST00000533674 TBC1D9BQ66K14 1250 aa12.15□□□□□ -0.46
BEST3-207ENST00000533674 TEX13AQ9BXU3 409 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms