RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PDILTQ8N807 584 aa14.66□□□□□ -0.06
RAD50-209ENST00000533482 NEO1Q92859 1461 aa14.66□□□□□ -0.06
RAD50-209ENST00000533482 MINDY4BA8MYZ0 360 aa14.66□□□□□ -0.06
RAD50-209ENST00000533482 TPM3P06753 285 aa14.66□□□□□ -0.06
RAD50-209ENST00000533482 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
RAD50-209ENST00000533482 USP26Q9BXU7 913 aa14.66□□□□□ -0.06
RAD50-209ENST00000533482 KCNQ3O43525 872 aa14.66□□□□□ -0.06
RAD50-209ENST00000533482 STX6O43752 255 aa14.66□□□□□ -0.06
RAD50-209ENST00000533482 KRT32Q14532 448 aa14.66□□□□□ -0.06
RAD50-209ENST00000533482 ZNF396Q96N95 335 aaPredicted RBP14.66□□□□□ -0.06
RAD50-209ENST00000533482 EVI5LQ96CN4 794 aa14.65□□□□□ -0.06
RAD50-209ENST00000533482 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
RAD50-209ENST00000533482 PRDM15P57071 1507 aaPredicted RBP14.65□□□□□ -0.06
RAD50-209ENST00000533482 PNMA6EA0A0J9YXQ4 647 aa14.65□□□□□ -0.06
RAD50-209ENST00000533482 RNMTO43148 476 aaKnown RBP14.65□□□□□ -0.06
RAD50-209ENST00000533482 PLEKHF1Q96S99 279 aa14.65□□□□□ -0.06
RAD50-209ENST00000533482 ZSCAN23Q3MJ62 389 aa14.64□□□□□ -0.07
RAD50-209ENST00000533482 INSRP06213 1382 aa14.64□□□□□ -0.07
RAD50-209ENST00000533482 IKQ13123 557 aaPredicted RBP14.64□□□□□ -0.07
RAD50-209ENST00000533482 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
RAD50-209ENST00000533482 NAT10Q9H0A0 1025 aaKnown RBP14.64□□□□□ -0.07
RAD50-209ENST00000533482 BCORL1Q5H9F3 1711 aa14.64□□□□□ -0.07
RAD50-209ENST00000533482 PLEKHG3A1L390 1219 aa14.64□□□□□ -0.07
RAD50-209ENST00000533482 ZCCHC11Q5TAX3 1644 aaKnown RBP14.64□□□□□ -0.07
RAD50-209ENST00000533482 NBPF7P0C2Y1 421 aaPredicted RBP14.64□□□□□ -0.07
RAD50-209ENST00000533482 SLC4A8Q2Y0W8 1093 aa14.64□□□□□ -0.07
RAD50-209ENST00000533482 LINS1Q8NG48 757 aa14.64□□□□□ -0.07
RAD50-209ENST00000533482 RAB3GAP1Q15042 981 aa14.63□□□□□ -0.07
RAD50-209ENST00000533482 MAP3K11Q16584 847 aa14.63□□□□□ -0.07
RAD50-209ENST00000533482 PCMTD1Q96MG8 357 aaPredicted RBP14.63□□□□□ -0.07
RAD50-209ENST00000533482 CHMLP26374 656 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 IMMTQ16891 758 aaKnown RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 HOOK1Q9UJC3 728 aaKnown RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 USP19O94966 1318 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 PRR36Q9H6K5 1346 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 HCLS1P14317 486 aaPredicted RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 RBM25P49756 843 aaKnown RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 HELBQ8NG08 1087 aaPredicted RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 SH2B1Q9NRF2 756 aaPredicted RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 AKAP2Q9Y2D5 859 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 PREX2Q70Z35 1606 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 ANKRD18BA2A2Z9 1011 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 CCDC69A6NI79 296 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 TSR1Q2NL82 804 aaKnown RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 GIMAP6Q6P9H5 292 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 CFAP45Q9UL16 551 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 TRPM2O94759 1503 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 OLFM4Q6UX06 510 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 CNPY2Q9Y2B0 182 aa14.62□□□□□ -0.07
RAD50-209ENST00000533482 RBM8AQ9Y5S9 174 aaKnown RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
RAD50-209ENST00000533482 SBNO1A3KN83 1393 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 SBNO2Q9Y2G9 1366 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 TSPOAP1O95153 1857 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 ZPR1O75312 459 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 TPM1P09493 284 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 BRPF1P55201 1214 aaPredicted RBP14.61□□□□□ -0.07
RAD50-209ENST00000533482 HSP90AB3PQ58FF7 597 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 CCDC183Q5T5S1 534 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 IL2RBP14784 551 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 TTLL5Q6EMB2 1281 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
RAD50-209ENST00000533482 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 ZNF790Q6PG37 636 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 BTG4Q9NY30 223 aa14.61□□□□□ -0.07
RAD50-209ENST00000533482 ZFYVE16Q7Z3T8 1539 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 UQCRHLA0A096LP55 91 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 UQCRHP07919 91 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 XBP1P17861 261 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 ROBO2Q9HCK4 1378 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 BICC1Q9H694 974 aaKnown RBP14.6□□□□□ -0.07
RAD50-209ENST00000533482 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
RAD50-209ENST00000533482 NDUFB9Q9Y6M9 179 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 KDM5DQ9BY66 1539 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 A1BGP04217 495 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 BRF1Q92994 677 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 C8orf37Q96NL8 207 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 NAPBQ9H115 298 aa14.6□□□□□ -0.07
RAD50-209ENST00000533482 TRIM22Q8IYM9 498 aa14.59□□□□□ -0.07
RAD50-209ENST00000533482 SOS1Q07889 1333 aaPredicted RBP14.59□□□□□ -0.07
RAD50-209ENST00000533482 GSPT1P15170 499 aaKnown RBP14.59□□□□□ -0.07
RAD50-209ENST00000533482 USP48Q86UV5 1035 aa14.59□□□□□ -0.07
RAD50-209ENST00000533482 ZNF496Q96IT1 587 aaPredicted RBP14.59□□□□□ -0.07
RAD50-209ENST00000533482 ZNF830Q96NB3 372 aaPredicted RBP14.59□□□□□ -0.07
RAD50-209ENST00000533482 TPM2P07951 284 aa14.59□□□□□ -0.07
RAD50-209ENST00000533482 RBM5P52756 815 aaKnown RBP eCLIP14.59□□□□□ -0.07
RAD50-209ENST00000533482 UBAP1LF5GYI3 381 aa14.58□□□□□ -0.07
RAD50-209ENST00000533482 ALDH1L1O75891 902 aa14.58□□□□□ -0.07
RAD50-209ENST00000533482 ANKIB1Q9P2G1 1089 aa14.58□□□□□ -0.07
RAD50-209ENST00000533482 MLH3Q9UHC1 1453 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 AK2P54819 239 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 TIMM10P62072 90 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 FAM177A1Q8N128 213 aaPredicted RBP14.58□□□□□ -0.08
RAD50-209ENST00000533482 FAM89AQ96GI7 184 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 DCAF5Q96JK2 942 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms