RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 STRCP1A6NGW2 1772 aa10.07□□□□□ -0.8
TRIM53BP-201ENST00000532912 PKD1L3Q7Z443 1732 aa10.06□□□□□ -0.8
TRIM53BP-201ENST00000532912 LRP10Q7Z4F1 713 aa10.06□□□□□ -0.8
TRIM53BP-201ENST00000532912 KCNB2Q92953 911 aa10.06□□□□□ -0.8
TRIM53BP-201ENST00000532912 SUCLG2Q96I99 432 aa10.06□□□□□ -0.8
TRIM53BP-201ENST00000532912 UPF3BQ9BZI7 483 aaKnown RBP10.06□□□□□ -0.8
TRIM53BP-201ENST00000532912 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.06□□□□□ -0.8
TRIM53BP-201ENST00000532912 DCCP43146 1447 aa10.06□□□□□ -0.8
TRIM53BP-201ENST00000532912 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
TRIM53BP-201ENST00000532912 GRM8O00222 908 aa10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 IGKV5-2P06315 115 aa10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 PHKG2P15735 406 aa10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 ZSCAN23Q3MJ62 389 aa10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 ZNF790Q6PG37 636 aa10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 PROSER2Q86WR7 435 aaPredicted RBP10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 PPP1R9BQ96SB3 815 aa10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 PA2G4Q9UQ80 394 aaKnown RBP10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 RPAP1Q9BWH6 1393 aaPredicted RBP10.05□□□□□ -0.8
TRIM53BP-201ENST00000532912 PRPF40AO75400 957 aaKnown RBP10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 SASH1O94885 1247 aa10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 CLCN1P35523 988 aa10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 CAVIN1Q6NZI2 390 aaKnown RBP10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 LMOD2Q6P5Q4 547 aa10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 ERC1Q8IUD2 1116 aa10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 CLASRPQ8N2M8 674 aaKnown RBP10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 ECHDC1Q9NTX5 307 aa10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 C9orf78Q9NZ63 289 aaPredicted RBP10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 ZC3H6P61129 1189 aaKnown RBP10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 BICC1Q9H694 974 aaKnown RBP10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 HDAC5Q9UQL6 1122 aa10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 PARP4Q9UKK3 1724 aaKnown RBP10.04□□□□□ -0.8
TRIM53BP-201ENST00000532912 DDX58O95786 925 aaKnown RBP10.03□□□□□ -0.8
TRIM53BP-201ENST00000532912 SLC39A6Q13433 755 aa10.03□□□□□ -0.8
TRIM53BP-201ENST00000532912 CWC27Q6UX04 472 aaKnown RBP10.03□□□□□ -0.8
TRIM53BP-201ENST00000532912 TMEM63CQ9P1W3 806 aa10.03□□□□□ -0.8
TRIM53BP-201ENST00000532912 COL15A1P39059 1388 aa10.03□□□□□ -0.8
TRIM53BP-201ENST00000532912 NEURL1BA8MQ27 555 aa10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 NASPP49321 788 aaPredicted RBP10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 PTH1RQ03431 593 aa10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 CCDC173Q0VFZ6 552 aa10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 OS9Q13438 667 aaPredicted RBP10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 NOL8Q76FK4 1167 aaKnown RBP10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 RUFY3Q7L099 469 aa10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 RAPGEF4Q8WZA2 1011 aa10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 EAF2Q96CJ1 260 aaPredicted RBP10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 SPG7Q9UQ90 795 aa10.02□□□□□ -0.8
TRIM53BP-201ENST00000532912 TMEM94Q12767 1356 aa10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 TNS3Q68CZ2 1445 aa10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 LAMB4A4D0S4 1761 aa10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 AK2P54819 239 aa10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 GCKRQ14397 625 aa10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 LARP1Q6PKG0 1096 aaKnown RBP10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 EVI5LQ96CN4 794 aa10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 ZNF496Q96IT1 587 aaPredicted RBP10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 METTL22Q9BUU2 404 aaPredicted RBP10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 RBSNQ9H1K0 784 aa10.02□□□□□ -0.81
TRIM53BP-201ENST00000532912 JCADQ9P266 1359 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 ARFGEF2Q9Y6D5 1785 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 ESPNB1AK53 854 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 CYP27B1O15528 508 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 MBD3O95983 291 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 IFIT2P09913 472 aaKnown RBP10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 RFX5P48382 616 aaPredicted RBP10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 AIMP1Q12904 312 aaKnown RBP10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 NECTIN1Q15223 517 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 EPHA10Q5JZY3 1008 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 FOXD4L5Q5VV16 416 aaPredicted RBP10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 AACSQ86V21 672 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 IFNL2Q8IZJ0 200 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 TMEM87AQ8NBN3 555 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 NFATC2IPQ8NCF5 419 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 XAGE3Q8WTP9 111 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 RUFY2Q8WXA3 655 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 FOXD4L4Q8WXT5 416 aaPredicted RBP10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 DDX17Q92841 729 aaKnown RBP10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 TM6SF1Q9BZW5 370 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 NLRP2Q9NX02 1062 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 CPDO75976 1380 aa10.01□□□□□ -0.81
TRIM53BP-201ENST00000532912 ST3GAL1Q11201 340 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 ADCK5Q3MIX3 580 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 LRSAM1Q6UWE0 723 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 KIAA1211Q6ZU35 1233 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 GPATCH3Q96I76 525 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 PDLIM2Q96JY6 352 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 DIAPH3Q9NSV4 1193 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 TLR7Q9NYK1 1049 aaKnown RBP10□□□□□ -0.81
TRIM53BP-201ENST00000532912 LIMCH1Q9UPQ0 1083 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 CCDC171Q6TFL3 1326 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 WDR33Q9C0J8 1336 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms