RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 DICER1Q9UPY3 1922 aaKnown RBP19.51■□□□□ 0.71
CDC27-209ENST00000532893 GNAT3A8MTJ3 354 aa19.51■□□□□ 0.71
CDC27-209ENST00000532893 VEGFBP49765 207 aa19.51■□□□□ 0.71
CDC27-209ENST00000532893 PRDM10Q9NQV6 1147 aa19.51■□□□□ 0.71
CDC27-209ENST00000532893 SLX4Q8IY92 1834 aa19.51■□□□□ 0.71
CDC27-209ENST00000532893 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
CDC27-209ENST00000532893 L3MBTL3Q96JM7 780 aaPredicted RBP19.5■□□□□ 0.71
CDC27-209ENST00000532893 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
CDC27-209ENST00000532893 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
CDC27-209ENST00000532893 VIRMAQ69YN4 1812 aaKnown RBP19.49■□□□□ 0.71
CDC27-209ENST00000532893 TMEM88BA6NKF7 163 aa19.49■□□□□ 0.71
CDC27-209ENST00000532893 ITGBL1O95965 494 aaPredicted RBP19.49■□□□□ 0.71
CDC27-209ENST00000532893 CTCFP49711 727 aaPredicted RBP19.49■□□□□ 0.71
CDC27-209ENST00000532893 EAPPQ56P03 285 aaPredicted RBP19.49■□□□□ 0.71
CDC27-209ENST00000532893 DZIP3Q86Y13 1208 aaKnown RBP19.49■□□□□ 0.71
CDC27-209ENST00000532893 C7orf43Q8WVR3 580 aa19.49■□□□□ 0.71
CDC27-209ENST00000532893 AIDAQ96BJ3 306 aa19.49■□□□□ 0.71
CDC27-209ENST00000532893 UBR2Q8IWV8 1755 aa19.49■□□□□ 0.71
CDC27-209ENST00000532893 COL11A2P13942 1736 aaPredicted RBP19.48■□□□□ 0.71
CDC27-209ENST00000532893 U2SURPO15042 1029 aaKnown RBP19.48■□□□□ 0.71
CDC27-209ENST00000532893 KCNQ3O43525 872 aa19.48■□□□□ 0.71
CDC27-209ENST00000532893 CC2D1BQ5T0F9 858 aaKnown RBP19.48■□□□□ 0.71
CDC27-209ENST00000532893 CLEC11AQ9Y240 323 aa19.48■□□□□ 0.71
CDC27-209ENST00000532893 PIP4K2AP48426 406 aaPredicted RBP19.47■□□□□ 0.71
CDC27-209ENST00000532893 CCDC93Q567U6 631 aa19.47■□□□□ 0.71
CDC27-209ENST00000532893 NBPF5PQ86XG9 351 aaPredicted RBP19.47■□□□□ 0.71
CDC27-209ENST00000532893 GAS2L2Q8NHY3 880 aa19.47■□□□□ 0.71
CDC27-209ENST00000532893 ZNF277Q9NRM2 450 aaPredicted RBP19.47■□□□□ 0.71
CDC27-209ENST00000532893 WBP1LQ9NX94 342 aa19.46■□□□□ 0.71
CDC27-209ENST00000532893 USP16Q9Y5T5 823 aa19.46■□□□□ 0.71
CDC27-209ENST00000532893 ZNF541Q9H0D2 1346 aa19.46■□□□□ 0.71
CDC27-209ENST00000532893 NPR1P16066 1061 aa19.45■□□□□ 0.7
CDC27-209ENST00000532893 LBX1P52954 281 aa19.45■□□□□ 0.7
CDC27-209ENST00000532893 FKBP4Q02790 459 aaKnown RBP eCLIP19.45■□□□□ 0.7
CDC27-209ENST00000532893 OLFM4Q6UX06 510 aa19.45■□□□□ 0.7
CDC27-209ENST00000532893 HACL1Q9UJ83 578 aa19.45■□□□□ 0.7
CDC27-209ENST00000532893 SCN7AQ01118 1682 aa19.44■□□□□ 0.7
CDC27-209ENST00000532893 BTBD11A6QL63 1104 aa19.44■□□□□ 0.7
CDC27-209ENST00000532893 PER1O15534 1290 aaPredicted RBP19.44■□□□□ 0.7
CDC27-209ENST00000532893 CNGB1Q14028 1251 aaPredicted RBP19.44■□□□□ 0.7
CDC27-209ENST00000532893 CLEC4GQ6UXB4 293 aa19.44■□□□□ 0.7
CDC27-209ENST00000532893 EPHX2P34913 555 aa19.43■□□□□ 0.7
CDC27-209ENST00000532893 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
CDC27-209ENST00000532893 KLRG2A4D1S0 409 aaPredicted RBP19.42■□□□□ 0.7
CDC27-209ENST00000532893 DEFB115Q30KQ5 88 aa19.42■□□□□ 0.7
CDC27-209ENST00000532893 MAP1SQ66K74 1059 aaPredicted RBP19.42■□□□□ 0.7
CDC27-209ENST00000532893 TPTE2Q6XPS3 522 aa19.42■□□□□ 0.7
CDC27-209ENST00000532893 RTKN2Q8IZC4 609 aa19.42■□□□□ 0.7
CDC27-209ENST00000532893 CNTROBQ8N137 903 aa19.42■□□□□ 0.7
CDC27-209ENST00000532893 KIF7Q2M1P5 1343 aa19.42■□□□□ 0.7
CDC27-209ENST00000532893 FAM177BA6PVY3 158 aa19.41■□□□□ 0.7
CDC27-209ENST00000532893 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
CDC27-209ENST00000532893 ZNF652Q9Y2D9 606 aa19.41■□□□□ 0.7
CDC27-209ENST00000532893 SCN4AP35499 1836 aa19.4■□□□□ 0.7
CDC27-209ENST00000532893 CACNA1SQ13698 1873 aa19.4■□□□□ 0.7
CDC27-209ENST00000532893 PNMA8AQ86V59 439 aaPredicted RBP19.4■□□□□ 0.7
CDC27-209ENST00000532893 SYNE4Q8N205 404 aa19.4■□□□□ 0.7
CDC27-209ENST00000532893 NIP7Q9Y221 180 aaKnown RBP eCLIP19.4■□□□□ 0.7
CDC27-209ENST00000532893 RNF123Q5XPI4 1314 aa19.4■□□□□ 0.7
CDC27-209ENST00000532893 CEMIPQ8WUJ3 1361 aa19.4■□□□□ 0.7
CDC27-209ENST00000532893 RASSF10A6NK89 507 aa19.39■□□□□ 0.69
CDC27-209ENST00000532893 FZD9O00144 591 aa19.39■□□□□ 0.69
CDC27-209ENST00000532893 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
CDC27-209ENST00000532893 SNRPA1P09661 255 aaKnown RBP19.38■□□□□ 0.69
CDC27-209ENST00000532893 HSPA8P11142 646 aaKnown RBP19.38■□□□□ 0.69
CDC27-209ENST00000532893 WDR33Q9C0J8 1336 aaKnown RBP19.38■□□□□ 0.69
CDC27-209ENST00000532893 ALDH1B1P30837 517 aa19.37■□□□□ 0.69
CDC27-209ENST00000532893 ABHD8Q96I13 439 aa19.37■□□□□ 0.69
CDC27-209ENST00000532893 ABT1Q9ULW3 272 aaKnown RBP19.37■□□□□ 0.69
CDC27-209ENST00000532893 NBPF26B4DH59 902 aa19.36■□□□□ 0.69
CDC27-209ENST00000532893 GTF2E1P29083 439 aaPredicted RBP19.36■□□□□ 0.69
CDC27-209ENST00000532893 PRKAR2BP31323 418 aa19.36■□□□□ 0.69
CDC27-209ENST00000532893 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
CDC27-209ENST00000532893 NBPF10Q6P3W6 841 aaKnown RBP19.36■□□□□ 0.69
CDC27-209ENST00000532893 GPC2Q8N158 579 aa19.36■□□□□ 0.69
CDC27-209ENST00000532893 NBPF15Q8N660 670 aa19.36■□□□□ 0.69
CDC27-209ENST00000532893 COL3A1P02461 1466 aaPredicted RBP19.35■□□□□ 0.69
CDC27-209ENST00000532893 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
CDC27-209ENST00000532893 ARFGEF2Q9Y6D5 1785 aa19.35■□□□□ 0.69
CDC27-209ENST00000532893 HLFQ16534 295 aa19.35■□□□□ 0.69
CDC27-209ENST00000532893 JDP2Q8WYK2 163 aa19.35■□□□□ 0.69
CDC27-209ENST00000532893 MCM10Q7L590 875 aa19.34■□□□□ 0.69
CDC27-209ENST00000532893 DDX21Q9NR30 783 aaKnown RBP eCLIP19.34■□□□□ 0.69
CDC27-209ENST00000532893 GJA3Q9Y6H8 435 aa19.34■□□□□ 0.69
CDC27-209ENST00000532893 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
CDC27-209ENST00000532893 FMR1Q06787 632 aaKnown RBP eCLIP19.33■□□□□ 0.68
CDC27-209ENST00000532893 FAM161AQ3B820 660 aa19.33■□□□□ 0.68
CDC27-209ENST00000532893 PSMD1Q99460 953 aa19.33■□□□□ 0.68
CDC27-209ENST00000532893 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.68
CDC27-209ENST00000532893 BCORQ6W2J9 1755 aa19.33■□□□□ 0.68
CDC27-209ENST00000532893 EIF6P56537 245 aaKnown RBP19.32■□□□□ 0.68
CDC27-209ENST00000532893 RTF1Q92541 710 aaKnown RBP19.32■□□□□ 0.68
CDC27-209ENST00000532893 RGL2O15211 777 aa19.31■□□□□ 0.68
CDC27-209ENST00000532893 EPS15P42566 896 aa19.31■□□□□ 0.68
CDC27-209ENST00000532893 DCTN1Q14203 1278 aa19.31■□□□□ 0.68
CDC27-209ENST00000532893 PAXIP1Q6ZW49 1069 aaPredicted RBP19.31■□□□□ 0.68
CDC27-209ENST00000532893 ADAMTSL1Q8N6G6 1762 aa19.31■□□□□ 0.68
CDC27-209ENST00000532893 LMOD1P29536 600 aaPredicted RBP19.3■□□□□ 0.68
CDC27-209ENST00000532893 GRM1Q13255 1194 aa19.3■□□□□ 0.68
CDC27-209ENST00000532893 NUTM1Q86Y26 1132 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms