RNA–Protein interactions for RNA: ENST00000532723.5

ARHGAP28-206, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-206ENST00000532723 LDHDQ86WU2 507 aa14.39□□□□□ -0.11
ARHGAP28-206ENST00000532723 L3MBTL3Q96JM7 780 aaPredicted RBP14.39□□□□□ -0.11
ARHGAP28-206ENST00000532723 FER1L6Q2WGJ9 1857 aa14.39□□□□□ -0.11
ARHGAP28-206ENST00000532723 FOXN1O15353 648 aa14.38□□□□□ -0.11
ARHGAP28-206ENST00000532723 PER1O15534 1290 aaPredicted RBP14.38□□□□□ -0.11
ARHGAP28-206ENST00000532723 DZIP3Q86Y13 1208 aaKnown RBP14.38□□□□□ -0.11
ARHGAP28-206ENST00000532723 C7orf43Q8WVR3 580 aa14.38□□□□□ -0.11
ARHGAP28-206ENST00000532723 TAF1DQ9H5J8 278 aaPredicted RBP14.38□□□□□ -0.11
ARHGAP28-206ENST00000532723 KIF7Q2M1P5 1343 aa14.38□□□□□ -0.11
ARHGAP28-206ENST00000532723 CCDC88AQ3V6T2 1871 aa14.38□□□□□ -0.11
ARHGAP28-206ENST00000532723 CEMIPQ8WUJ3 1361 aa14.37□□□□□ -0.11
ARHGAP28-206ENST00000532723 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
ARHGAP28-206ENST00000532723 CCDC93Q567U6 631 aa14.37□□□□□ -0.11
ARHGAP28-206ENST00000532723 CC2D1BQ5T0F9 858 aaKnown RBP14.37□□□□□ -0.11
ARHGAP28-206ENST00000532723 CLEC4GQ6UXB4 293 aa14.37□□□□□ -0.11
ARHGAP28-206ENST00000532723 PRDM10Q9NQV6 1147 aa14.37□□□□□ -0.11
ARHGAP28-206ENST00000532723 NBPF5PQ86XG9 351 aaPredicted RBP14.36□□□□□ -0.11
ARHGAP28-206ENST00000532723 DICER1Q9UPY3 1922 aaKnown RBP14.36□□□□□ -0.11
ARHGAP28-206ENST00000532723 COL3A1P02461 1466 aaPredicted RBP14.36□□□□□ -0.11
ARHGAP28-206ENST00000532723 TMEM88BA6NKF7 163 aa14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 BTBD11A6QL63 1104 aa14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 KCNQ3O43525 872 aa14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 ITGBL1O95965 494 aaPredicted RBP14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 NPR1P16066 1061 aa14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 AIDAQ96BJ3 306 aa14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 USP16Q9Y5T5 823 aa14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 VIRMAQ69YN4 1812 aaKnown RBP14.35□□□□□ -0.11
ARHGAP28-206ENST00000532723 SLX4Q8IY92 1834 aa14.34□□□□□ -0.11
ARHGAP28-206ENST00000532723 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
ARHGAP28-206ENST00000532723 CTCFP49711 727 aaPredicted RBP14.34□□□□□ -0.11
ARHGAP28-206ENST00000532723 VEGFBP49765 207 aa14.34□□□□□ -0.11
ARHGAP28-206ENST00000532723 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
ARHGAP28-206ENST00000532723 ZNF541Q9H0D2 1346 aa14.34□□□□□ -0.11
ARHGAP28-206ENST00000532723 RGL2O15211 777 aa14.33□□□□□ -0.12
ARHGAP28-206ENST00000532723 PIP4K2AP48426 406 aaPredicted RBP14.33□□□□□ -0.12
ARHGAP28-206ENST00000532723 EAPPQ56P03 285 aaPredicted RBP14.33□□□□□ -0.12
ARHGAP28-206ENST00000532723 ZNF277Q9NRM2 450 aaPredicted RBP14.33□□□□□ -0.12
ARHGAP28-206ENST00000532723 HACL1Q9UJ83 578 aa14.33□□□□□ -0.12
ARHGAP28-206ENST00000532723 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.12
ARHGAP28-206ENST00000532723 EPHX2P34913 555 aa14.32□□□□□ -0.12
ARHGAP28-206ENST00000532723 TPTE2Q6XPS3 522 aa14.32□□□□□ -0.12
ARHGAP28-206ENST00000532723 RTKN2Q8IZC4 609 aa14.32□□□□□ -0.12
ARHGAP28-206ENST00000532723 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
ARHGAP28-206ENST00000532723 SIPA1L3O60292 1781 aaPredicted RBP14.32□□□□□ -0.12
ARHGAP28-206ENST00000532723 PRAMEF22A3QJZ6 481 aa14.31□□□□□ -0.12
ARHGAP28-206ENST00000532723 SNRPA1P09661 255 aaKnown RBP14.31□□□□□ -0.12
ARHGAP28-206ENST00000532723 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
ARHGAP28-206ENST00000532723 PHACTR3Q96KR7 559 aa14.31□□□□□ -0.12
ARHGAP28-206ENST00000532723 NIP7Q9Y221 180 aaKnown RBP eCLIP14.31□□□□□ -0.12
ARHGAP28-206ENST00000532723 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
ARHGAP28-206ENST00000532723 BCORQ6W2J9 1755 aa14.31□□□□□ -0.12
ARHGAP28-206ENST00000532723 ARFGEF2Q9Y6D5 1785 aa14.31□□□□□ -0.12
ARHGAP28-206ENST00000532723 SCN4AP35499 1836 aa14.3□□□□□ -0.12
ARHGAP28-206ENST00000532723 RASSF10A6NK89 507 aa14.3□□□□□ -0.12
ARHGAP28-206ENST00000532723 FZD9O00144 591 aa14.3□□□□□ -0.12
ARHGAP28-206ENST00000532723 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
ARHGAP28-206ENST00000532723 IARSP41252 1262 aaKnown RBP14.3□□□□□ -0.12
ARHGAP28-206ENST00000532723 OLFM4Q6UX06 510 aa14.3□□□□□ -0.12
ARHGAP28-206ENST00000532723 RSPH6AQ9H0K4 717 aa14.3□□□□□ -0.12
ARHGAP28-206ENST00000532723 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
ARHGAP28-206ENST00000532723 ALDH1B1P30837 517 aa14.29□□□□□ -0.12
ARHGAP28-206ENST00000532723 LBX1P52954 281 aa14.29□□□□□ -0.12
ARHGAP28-206ENST00000532723 DEFB115Q30KQ5 88 aa14.29□□□□□ -0.12
ARHGAP28-206ENST00000532723 CNTROBQ8N137 903 aa14.29□□□□□ -0.12
ARHGAP28-206ENST00000532723 NBPF26B4DH59 902 aa14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 CNGB1Q14028 1251 aaPredicted RBP14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 NBPF10Q6P3W6 841 aaKnown RBP14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 GPC2Q8N158 579 aa14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 SYNE4Q8N205 404 aa14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 NBPF15Q8N660 670 aa14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 PSMD1Q99460 953 aa14.28□□□□□ -0.12
ARHGAP28-206ENST00000532723 ADAMTSL1Q8N6G6 1762 aa14.27□□□□□ -0.12
ARHGAP28-206ENST00000532723 FAM177BA6PVY3 158 aa14.27□□□□□ -0.13
ARHGAP28-206ENST00000532723 HSPA8P11142 646 aaKnown RBP14.27□□□□□ -0.13
ARHGAP28-206ENST00000532723 MAP2K1Q02750 393 aaPredicted RBP14.27□□□□□ -0.13
ARHGAP28-206ENST00000532723 JDP2Q8WYK2 163 aa14.27□□□□□ -0.13
ARHGAP28-206ENST00000532723 SNED1Q8TER0 1413 aa14.26□□□□□ -0.13
ARHGAP28-206ENST00000532723 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
ARHGAP28-206ENST00000532723 GTF2E1P29083 439 aaPredicted RBP14.26□□□□□ -0.13
ARHGAP28-206ENST00000532723 HLFQ16534 295 aa14.26□□□□□ -0.13
ARHGAP28-206ENST00000532723 CRY2Q49AN0 593 aa14.26□□□□□ -0.13
ARHGAP28-206ENST00000532723 MCM10Q7L590 875 aa14.26□□□□□ -0.13
ARHGAP28-206ENST00000532723 CFAP53Q96M91 514 aa14.26□□□□□ -0.13
ARHGAP28-206ENST00000532723 CACNA1SQ13698 1873 aa14.26□□□□□ -0.13
ARHGAP28-206ENST00000532723 CC2D2BQ6DHV5 1058 aa14.25□□□□□ -0.13
ARHGAP28-206ENST00000532723 DDX21Q9NR30 783 aaKnown RBP eCLIP14.25□□□□□ -0.13
ARHGAP28-206ENST00000532723 ABT1Q9ULW3 272 aaKnown RBP14.25□□□□□ -0.13
ARHGAP28-206ENST00000532723 NUDCQ9Y266 331 aa14.25□□□□□ -0.13
ARHGAP28-206ENST00000532723 HTATSF1O43719 755 aaKnown RBP14.24□□□□□ -0.13
ARHGAP28-206ENST00000532723 EIF6P56537 245 aaKnown RBP14.24□□□□□ -0.13
ARHGAP28-206ENST00000532723 ABHD8Q96I13 439 aa14.24□□□□□ -0.13
ARHGAP28-206ENST00000532723 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
ARHGAP28-206ENST00000532723 ABCC12Q96J65 1359 aa14.23□□□□□ -0.13
ARHGAP28-206ENST00000532723 U2AF1L5P0DN76 240 aaPredicted RBP14.23□□□□□ -0.13
ARHGAP28-206ENST00000532723 LMOD1P29536 600 aaPredicted RBP14.23□□□□□ -0.13
ARHGAP28-206ENST00000532723 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.13
ARHGAP28-206ENST00000532723 DCTN1Q14203 1278 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms