RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 COPS6Q7L5N1 327 aa10.21□□□□□ -0.77
CTNND1-232ENST00000532649 NEO1Q92859 1461 aa10.21□□□□□ -0.77
CTNND1-232ENST00000532649 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-232ENST00000532649 SCLT1Q96NL6 688 aa10.21□□□□□ -0.77
CTNND1-232ENST00000532649 BTG4Q9NY30 223 aa10.21□□□□□ -0.77
CTNND1-232ENST00000532649 STIM1Q13586 685 aa10.21□□□□□ -0.78
CTNND1-232ENST00000532649 NFATC2IPQ8NCF5 419 aa10.21□□□□□ -0.78
CTNND1-232ENST00000532649 DEF6Q9H4E7 631 aa10.21□□□□□ -0.78
CTNND1-232ENST00000532649 CFAP65Q6ZU64 1925 aaKnown RBP10.21□□□□□ -0.78
CTNND1-232ENST00000532649 LETM1O95202 739 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-232ENST00000532649 SMC2O95347 1197 aa10.21□□□□□ -0.78
CTNND1-232ENST00000532649 HOXC9P31274 260 aa10.21□□□□□ -0.78
CTNND1-232ENST00000532649 SLF2Q8IX21 1173 aa10.21□□□□□ -0.78
CTNND1-232ENST00000532649 SETDB2Q96T68 719 aa10.21□□□□□ -0.78
CTNND1-232ENST00000532649 ARHGEF12Q9NZN5 1544 aa10.21□□□□□ -0.78
CTNND1-232ENST00000532649 CCDC152Q4G0S7 254 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 AXDND1Q5T1B0 1012 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-232ENST00000532649 CCDC181Q5TID7 509 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 TRAK2O60296 914 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 KRT85P78386 507 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 DDX11Q96FC9 970 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 EYA1Q99502 592 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 ZNF76P36508 570 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 WASF1Q92558 559 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 ORAI2Q96SN7 254 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 GOLIM4O00461 696 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 SNRKQ9NRH2 765 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 RANBP6O60518 1105 aaKnown RBP10.2□□□□□ -0.78
CTNND1-232ENST00000532649 FAM13BQ9NYF5 915 aa10.2□□□□□ -0.78
CTNND1-232ENST00000532649 PPP4R3AQ6IN85 833 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 CARD14Q9BXL6 1004 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 ECHDC1Q9NTX5 307 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 ZFYVE9O95405 1425 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 MAP3K19Q56UN5 1328 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 IP6K1Q92551 441 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 CFAP74Q9C0B2 1584 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 ZNF444Q8N0Y2 327 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-232ENST00000532649 UPF3BQ9BZI7 483 aaKnown RBP10.19□□□□□ -0.78
CTNND1-232ENST00000532649 POLR3AO14802 1390 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-232ENST00000532649 MAP3K5Q99683 1374 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 ZNF213O14771 459 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 STAMBPO95630 424 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 C8orf58Q8NAV2 365 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 HOMER2Q9NSB8 354 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-232ENST00000532649 CCDC91Q7Z6B0 441 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
CTNND1-232ENST00000532649 SEC63Q9UGP8 760 aaKnown RBP10.19□□□□□ -0.78
CTNND1-232ENST00000532649 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
CTNND1-232ENST00000532649 ANAPC15P60006 121 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 TTLL12Q14166 644 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-232ENST00000532649 TTF1Q15361 905 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-232ENST00000532649 SKAP1Q86WV1 359 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 DRC1Q96MC2 740 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 DACH1Q9UI36 760 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 PCDH11XQ9BZA7 1347 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 PCDH11YQ9BZA8 1340 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 TAX1BP1Q86VP1 789 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 EVI5LQ96CN4 794 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 MYO5CQ9NQX4 1742 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 TRIM5Q9C035 493 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 INCENPQ9NQS7 918 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 PARD3Q8TEW0 1356 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 TNIP1Q15025 636 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 DCAF5Q96JK2 942 aa10.18□□□□□ -0.78
CTNND1-232ENST00000532649 SSBP05455 408 aaKnown RBP eCLIP10.17□□□□□ -0.781e-7■■■■■ 26.8
CTNND1-232ENST00000532649 SSR1P43307 286 aaKnown RBP10.17□□□□□ -0.78
CTNND1-232ENST00000532649 NASPP49321 788 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-232ENST00000532649 LEKR1Q6ZMV7 388 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 IQCA1Q86XH1 822 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 DZIP3Q86Y13 1208 aaKnown RBP10.17□□□□□ -0.78
CTNND1-232ENST00000532649 CCDC83Q8IWF9 413 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 MEIS3Q99687 375 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 TSPY26PQ9H489 355 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 CHMP4BP1P59074 171 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 JAKMIP3Q5VZ66 844 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 SPATA32Q96LK8 384 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 KSR2Q6VAB6 950 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.17□□□□□ -0.78
CTNND1-232ENST00000532649 CCDC96Q2M329 555 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 NLRP3Q96P20 1036 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 PABPN1LA6NDY0 278 aaKnown RBP10.17□□□□□ -0.78
CTNND1-232ENST00000532649 TSHZ3Q63HK5 1081 aa10.17□□□□□ -0.78
CTNND1-232ENST00000532649 RNF41Q9H4P4 317 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-232ENST00000532649 GRM8O00222 908 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 LDHCP07864 332 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 CTCFLQ8NI51 663 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-232ENST00000532649 ARHGAP45Q92619 1136 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 TNMDQ9H2S6 317 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 BMP2KQ9NSY1 1161 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-232ENST00000532649 CFAP45Q9UL16 551 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
CTNND1-232ENST00000532649 YEATS2Q9ULM3 1422 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 EPB41L2O43491 1005 aaKnown RBP10.16□□□□□ -0.78
CTNND1-232ENST00000532649 KIAA0754O94854 1291 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 TFCP2L1Q9NZI6 479 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 TMEM2Q9UHN6 1383 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms