RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 PKP1Q13835 747 aa28.65■■■□□ 2.18
SORL1-210ENST00000532451 MRC1P22897 1456 aa28.65■■■□□ 2.18
SORL1-210ENST00000532451 SPATA31A3Q5VYP0 1347 aa28.64■■■□□ 2.18
SORL1-210ENST00000532451 SGSM2O43147 1006 aa28.64■■■□□ 2.18
SORL1-210ENST00000532451 RIC3Q7Z5B4 369 aa28.64■■■□□ 2.18
SORL1-210ENST00000532451 PA2G4Q9UQ80 394 aaKnown RBP28.64■■■□□ 2.18
SORL1-210ENST00000532451 HSPA4P34932 840 aa28.64■■■□□ 2.17
SORL1-210ENST00000532451 LARP1Q6PKG0 1096 aaKnown RBP28.64■■■□□ 2.17
SORL1-210ENST00000532451 KAZALD1Q96I82 304 aa28.64■■■□□ 2.17
SORL1-210ENST00000532451 DCAF5Q96JK2 942 aa28.64■■■□□ 2.17
SORL1-210ENST00000532451 IGKV5-2P06315 115 aa28.62■■■□□ 2.17
SORL1-210ENST00000532451 MRE11P49959 708 aa28.62■■■□□ 2.17
SORL1-210ENST00000532451 ZNF496Q96IT1 587 aaPredicted RBP28.62■■■□□ 2.17
SORL1-210ENST00000532451 MYL6BP14649 208 aa28.62■■■□□ 2.17
SORL1-210ENST00000532451 BICC1Q9H694 974 aaKnown RBP28.62■■■□□ 2.17
SORL1-210ENST00000532451 RAD50Q92878 1312 aa28.62■■■□□ 2.17
SORL1-210ENST00000532451 CPDO75976 1380 aa28.61■■■□□ 2.17
SORL1-210ENST00000532451 CYP27B1O15528 508 aa28.61■■■□□ 2.17
SORL1-210ENST00000532451 CUL4AQ13619 759 aa28.61■■■□□ 2.17
SORL1-210ENST00000532451 PKD1L3Q7Z443 1732 aa28.61■■■□□ 2.17
SORL1-210ENST00000532451 XAGE3Q8WTP9 111 aa28.61■■■□□ 2.17
SORL1-210ENST00000532451 GPATCH3Q96I76 525 aa28.61■■■□□ 2.17
SORL1-210ENST00000532451 ECHDC1Q9NTX5 307 aa28.61■■■□□ 2.17
SORL1-210ENST00000532451 NEXNQ0ZGT2 675 aa28.6■■■□□ 2.17
SORL1-210ENST00000532451 ZDHHC9Q9Y397 364 aa28.6■■■□□ 2.17
SORL1-210ENST00000532451 IFIT2P09913 472 aaKnown RBP28.59■■■□□ 2.17
SORL1-210ENST00000532451 KLHL40Q2TBA0 621 aa28.59■■■□□ 2.17
SORL1-210ENST00000532451 MCTP1Q6DN14 999 aa28.59■■■□□ 2.17
SORL1-210ENST00000532451 TTC5Q8N0Z6 440 aa28.59■■■□□ 2.17
SORL1-210ENST00000532451 NEURL1BA8MQ27 555 aa28.58■■■□□ 2.17
SORL1-210ENST00000532451 SNRPA1P09661 255 aaKnown RBP28.58■■■□□ 2.17
SORL1-210ENST00000532451 COPS6Q7L5N1 327 aa28.58■■■□□ 2.17
SORL1-210ENST00000532451 LSG1Q9H089 658 aaKnown RBP28.58■■■□□ 2.17
SORL1-210ENST00000532451 METTL22Q9BUU2 404 aaPredicted RBP28.57■■■□□ 2.16
SORL1-210ENST00000532451 UPF3BQ9BZI7 483 aaKnown RBP28.57■■■□□ 2.16
SORL1-210ENST00000532451 GRPEL1Q9HAV7 217 aa28.57■■■□□ 2.16
SORL1-210ENST00000532451 G3BP1Q13283 466 aaKnown RBP eCLIP28.57■■■□□ 2.16
SORL1-210ENST00000532451 INTS4Q96HW7 963 aaKnown RBP28.57■■■□□ 2.16
SORL1-210ENST00000532451 DDX49Q9Y6V7 483 aaKnown RBP28.57■■■□□ 2.16
SORL1-210ENST00000532451 LRP10Q7Z4F1 713 aa28.56■■■□□ 2.16
SORL1-210ENST00000532451 AACSQ86V21 672 aa28.56■■■□□ 2.16
SORL1-210ENST00000532451 FMNL2Q96PY5 1086 aa28.56■■■□□ 2.16
SORL1-210ENST00000532451 PANK2Q9BZ23 570 aa28.56■■■□□ 2.16
SORL1-210ENST00000532451 USP16Q9Y5T5 823 aa28.56■■■□□ 2.16
SORL1-210ENST00000532451 GCKRQ14397 625 aa28.55■■■□□ 2.16
SORL1-210ENST00000532451 CWC27Q6UX04 472 aaKnown RBP28.55■■■□□ 2.16
SORL1-210ENST00000532451 MYD88Q99836 296 aa28.55■■■□□ 2.16
SORL1-210ENST00000532451 SASH1O94885 1247 aa28.55■■■□□ 2.16
SORL1-210ENST00000532451 KIAA1211Q6ZU35 1233 aa28.54■■■□□ 2.16
SORL1-210ENST00000532451 DIAPH3Q9NSV4 1193 aa28.54■■■□□ 2.16
SORL1-210ENST00000532451 NOL8Q76FK4 1167 aaKnown RBP28.54■■■□□ 2.16
SORL1-210ENST00000532451 RUFY2Q8WXA3 655 aa28.54■■■□□ 2.16
SORL1-210ENST00000532451 LMBRD1Q9NUN5 540 aa28.54■■■□□ 2.16
SORL1-210ENST00000532451 CABP4P57796 275 aa28.53■■■□□ 2.16
SORL1-210ENST00000532451 ANKRD13DQ6ZTN6 518 aa28.53■■■□□ 2.16
SORL1-210ENST00000532451 SNX14Q9Y5W7 946 aa28.53■■■□□ 2.16
SORL1-210ENST00000532451 HSPA2P54652 639 aa28.52■■■□□ 2.16
SORL1-210ENST00000532451 GAS2L3Q86XJ1 694 aa28.52■■■□□ 2.16
SORL1-210ENST00000532451 EVI5LQ96CN4 794 aa28.51■■■□□ 2.16
SORL1-210ENST00000532451 BRINP3Q76B58 766 aa28.51■■■□□ 2.15
SORL1-210ENST00000532451 FAM43AQ8N2R8 423 aa28.51■■■□□ 2.15
SORL1-210ENST00000532451 EAF2Q96CJ1 260 aaPredicted RBP28.51■■■□□ 2.15
SORL1-210ENST00000532451 PARP4Q9UKK3 1724 aaKnown RBP28.5■■■□□ 2.15
SORL1-210ENST00000532451 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.5■■■□□ 2.15
SORL1-210ENST00000532451 XIRP1Q702N8 1843 aaKnown RBP28.49■■■□□ 2.15
SORL1-210ENST00000532451 BRD1O95696 1058 aa28.48■■■□□ 2.15
SORL1-210ENST00000532451 PIP4K2AP48426 406 aaPredicted RBP28.48■■■□□ 2.15
SORL1-210ENST00000532451 EPHA10Q5JZY3 1008 aa28.48■■■□□ 2.15
SORL1-210ENST00000532451 RASEFQ8IZ41 740 aa28.48■■■□□ 2.15
SORL1-210ENST00000532451 SIL1Q9H173 461 aa28.48■■■□□ 2.15
SORL1-210ENST00000532451 GLI3P10071 1580 aa28.47■■■□□ 2.15
SORL1-210ENST00000532451 CCDC8Q9H0W5 538 aaPredicted RBP28.47■■■□□ 2.15
SORL1-210ENST00000532451 TTC14Q96N46 770 aa28.47■■■□□ 2.15
SORL1-210ENST00000532451 KLHDC4Q8TBB5 520 aa28.45■■■□□ 2.15
SORL1-210ENST00000532451 WDR17Q8IZU2 1322 aa28.45■■■□□ 2.15
SORL1-210ENST00000532451 LAMB4A4D0S4 1761 aa28.45■■■□□ 2.15
SORL1-210ENST00000532451 PRPF40AO75400 957 aaKnown RBP28.45■■■□□ 2.14
SORL1-210ENST00000532451 PRDM11Q9NQV5 511 aa28.44■■■□□ 2.14
SORL1-210ENST00000532451 TLR7Q9NYK1 1049 aaKnown RBP28.44■■■□□ 2.14
SORL1-210ENST00000532451 COL15A1P39059 1388 aa28.44■■■□□ 2.14
SORL1-210ENST00000532451 HIP1O00291 1037 aa28.44■■■□□ 2.14
SORL1-210ENST00000532451 PTH1RQ03431 593 aa28.44■■■□□ 2.14
SORL1-210ENST00000532451 ARFGEF2Q9Y6D5 1785 aa28.43■■■□□ 2.14
SORL1-210ENST00000532451 FOXD4L5Q5VV16 416 aaPredicted RBP28.43■■■□□ 2.14
SORL1-210ENST00000532451 FOXD4L4Q8WXT5 416 aaPredicted RBP28.43■■■□□ 2.14
SORL1-210ENST00000532451 COPRSQ9NQ92 184 aa28.43■■■□□ 2.14
SORL1-210ENST00000532451 PCDH11XQ9BZA7 1347 aa28.43■■■□□ 2.14
SORL1-210ENST00000532451 PCDH11YQ9BZA8 1340 aa28.43■■■□□ 2.14
SORL1-210ENST00000532451 NCLP19338 710 aaKnown RBP28.42■■■□□ 2.14
SORL1-210ENST00000532451 ZCRB1Q8TBF4 217 aaKnown RBP28.42■■■□□ 2.14
SORL1-210ENST00000532451 AFDNP55196 1824 aaKnown RBP28.42■■■□□ 2.14
SORL1-210ENST00000532451 CAVIN1Q6NZI2 390 aaKnown RBP28.41■■■□□ 2.14
SORL1-210ENST00000532451 TOM1L2Q6ZVM7 507 aa28.41■■■□□ 2.14
SORL1-210ENST00000532451 PLBD2Q8NHP8 589 aa28.41■■■□□ 2.14
SORL1-210ENST00000532451 RFX5P48382 616 aaPredicted RBP28.41■■■□□ 2.14
SORL1-210ENST00000532451 AK2P54819 239 aa28.41■■■□□ 2.14
SORL1-210ENST00000532451 RABL6Q3YEC7 729 aaPredicted RBP28.41■■■□□ 2.14
SORL1-210ENST00000532451 KCNB2Q92953 911 aa28.41■■■□□ 2.14
SORL1-210ENST00000532451 ERBB4Q15303 1308 aa28.41■■■□□ 2.14
SORL1-210ENST00000532451 UBE3BQ7Z3V4 1068 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms