RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	SLIT1	O75093	1534 aa		9.17	□□□□□ -0.94
PUM1-222	ENST00000531867	NCOA2	Q15596	1464 aa		9.17	□□□□□ -0.94
PUM1-222	ENST00000531867	SCAF11	Q99590	1463 aa	Known RBP	9.17	□□□□□ -0.94
PUM1-222	ENST00000531867	FYCO1	Q9BQS8	1478 aa		9.17	□□□□□ -0.94
PUM1-222	ENST00000531867	SOBP	A7XYQ1	873 aa		9.17	□□□□□ -0.94
PUM1-222	ENST00000531867	NFX1	Q12986	1120 aa	Known RBP	9.17	□□□□□ -0.94
PUM1-222	ENST00000531867	INSM2	Q96T92	566 aa	Predicted RBP	9.17	□□□□□ -0.94
PUM1-222	ENST00000531867	DOLK	Q9UPQ8	538 aa		9.17	□□□□□ -0.94
PUM1-222	ENST00000531867	CCNB3	Q8WWL7	1395 aa		9.16	□□□□□ -0.94
PUM1-222	ENST00000531867	LTK	P29376	864 aa		9.16	□□□□□ -0.94
PUM1-222	ENST00000531867	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.16	□□□□□ -0.94
PUM1-222	ENST00000531867	ZNF395	Q9H8N7	513 aa	Predicted RBP	9.16	□□□□□ -0.94
PUM1-222	ENST00000531867	MAP3K1	Q13233	1512 aa		9.15	□□□□□ -0.94
PUM1-222	ENST00000531867	ERVK-7	P63135	1459 aa		9.15	□□□□□ -0.94
PUM1-222	ENST00000531867	LRRC9	Q6ZRR7	1453 aa		9.15	□□□□□ -0.94
PUM1-222	ENST00000531867	JCAD	Q9P266	1359 aa		9.15	□□□□□ -0.94
PUM1-222	ENST00000531867	ZNF644	Q9H582	1327 aa	Predicted RBP	9.15	□□□□□ -0.94
PUM1-222	ENST00000531867	PHTF2	Q8N3S3	785 aa		9.15	□□□□□ -0.94
PUM1-222	ENST00000531867	KDF1	Q8NAX2	398 aa	Predicted RBP	9.15	□□□□□ -0.94
PUM1-222	ENST00000531867	SIRT1	Q96EB6	747 aa		9.15	□□□□□ -0.94
PUM1-222	ENST00000531867	TRAK2	O60296	914 aa		9.14	□□□□□ -0.95
PUM1-222	ENST00000531867	CTSO	P43234	321 aa	Predicted RBP	9.14	□□□□□ -0.95
PUM1-222	ENST00000531867	SCTR	P47872	440 aa		9.14	□□□□□ -0.95
PUM1-222	ENST00000531867	MAP7D1	Q3KQU3	841 aa		9.14	□□□□□ -0.95
PUM1-222	ENST00000531867	CHIC2	Q9UKJ5	165 aa		9.14	□□□□□ -0.95
PUM1-222	ENST00000531867	ABCC3	O15438	1527 aa		9.14	□□□□□ -0.95
PUM1-222	ENST00000531867	CDK12	Q9NYV4	1490 aa	Predicted RBP	9.14	□□□□□ -0.95
PUM1-222	ENST00000531867	PHLPP1	O60346	1717 aa		9.14	□□□□□ -0.95
PUM1-222	ENST00000531867	TMEM94	Q12767	1356 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	TIAM1	Q13009	1591 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867		H3BM21	787 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	GPC1	P35052	558 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	USP4	Q13107	963 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	ZNF772	Q68DY9	489 aa	Predicted RBP	9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	RNF217	Q8TC41	542 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	OSBPL3	Q9H4L5	887 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	CAMSAP2	Q08AD1	1489 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	LRP6	O75581	1613 aa		9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	COL16A1	Q07092	1604 aa	Predicted RBP	9.13	□□□□□ -0.95
PUM1-222	ENST00000531867	FIGNL2	A6NMB9	653 aa		9.12	□□□□□ -0.95
PUM1-222	ENST00000531867	GNRH1	P01148	92 aa		9.12	□□□□□ -0.95
PUM1-222	ENST00000531867	KCNA6	P17658	529 aa		9.12	□□□□□ -0.95
PUM1-222	ENST00000531867	LCE2A	Q5TA79	106 aa	Predicted RBP	9.12	□□□□□ -0.95
PUM1-222	ENST00000531867	TXNDC2	Q86VQ3	553 aa		9.12	□□□□□ -0.95
PUM1-222	ENST00000531867	IRF7	Q92985	503 aa		9.12	□□□□□ -0.95
PUM1-222	ENST00000531867	PRDM15	P57071	1507 aa	Predicted RBP	9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	SPATA31A6	Q5VVP1	1343 aa		9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	TET3	O43151	1660 aa		9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	CCDC141	Q6ZP82	1450 aa		9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	RNF144A	P50876	292 aa	Predicted RBP	9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	CLN3	Q13286	438 aa		9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	FOXD4L5	Q5VV16	416 aa	Predicted RBP	9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	PLPP7	Q8NBV4	271 aa		9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	NLRP3	Q96P20	1036 aa		9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	CDCA7	Q9BWT1	371 aa	Predicted RBP	9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	ALG2	Q9H553	416 aa		9.11	□□□□□ -0.95
PUM1-222	ENST00000531867	FGD6	Q6ZV73	1430 aa		9.11	□□□□□ -0.95
PUM1-222	ENST00000531867		A0A1W2PRU2	124 aa		9.1	□□□□□ -0.95
PUM1-222	ENST00000531867	MEN1	O00255	615 aa		9.1	□□□□□ -0.95
PUM1-222	ENST00000531867	OXLD1	Q5BKU9	147 aa		9.1	□□□□□ -0.95
PUM1-222	ENST00000531867	PROSER2	Q86WR7	435 aa	Predicted RBP	9.1	□□□□□ -0.95
PUM1-222	ENST00000531867	NFATC2IP	Q8NCF5	419 aa		9.1	□□□□□ -0.95
PUM1-222	ENST00000531867	NWD1	Q149M9	1564 aa		9.1	□□□□□ -0.95
PUM1-222	ENST00000531867	CFAP65	Q6ZU64	1925 aa	Known RBP	9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	MROH1	Q8NDA8	1641 aa		9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	RXRB	P28702	533 aa		9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	PTS	Q03393	145 aa		9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	LYSMD3	Q7Z3D4	306 aa		9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	ARHGEF10L	Q9HCE6	1279 aa		9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	SLAIN2	Q9P270	581 aa		9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	KDM5A	P29375	1690 aa	Known RBP	9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	TMEM2	Q9UHN6	1383 aa		9.09	□□□□□ -0.95
PUM1-222	ENST00000531867	NKTR	P30414	1462 aa	Known RBP	9.08	□□□□□ -0.96
PUM1-222	ENST00000531867	ARHGAP31	Q2M1Z3	1444 aa		9.08	□□□□□ -0.96
PUM1-222	ENST00000531867	SHPRH	Q149N8	1683 aa		9.08	□□□□□ -0.96
PUM1-222	ENST00000531867		A6NJR5	290 aa		9.08	□□□□□ -0.96
PUM1-222	ENST00000531867	LZTS3	O60299	673 aa	Predicted RBP	9.08	□□□□□ -0.96
PUM1-222	ENST00000531867	ESCO1	Q5FWF5	840 aa		9.08	□□□□□ -0.96
PUM1-222	ENST00000531867	CLUAP1	Q96AJ1	413 aa		9.08	□□□□□ -0.96
PUM1-222	ENST00000531867	EID1	Q9Y6B2	187 aa		9.08	□□□□□ -0.96
PUM1-222	ENST00000531867	EIF2AK4	Q9P2K8	1649 aa	Known RBP	9.08	□□□□□ -0.96
PUM1-222	ENST00000531867	ARHGEF5	Q12774	1597 aa		9.07	□□□□□ -0.96
PUM1-222	ENST00000531867	CEP162	Q5TB80	1403 aa		9.07	□□□□□ -0.96
PUM1-222	ENST00000531867	PPFIA3	O75145	1194 aa		9.07	□□□□□ -0.96
PUM1-222	ENST00000531867	VSIG8	P0DPA2	414 aa		9.07	□□□□□ -0.96
PUM1-222	ENST00000531867	VEGFB	P49765	207 aa		9.07	□□□□□ -0.96
PUM1-222	ENST00000531867	SLC27A3	Q5K4L6	730 aa		9.07	□□□□□ -0.96
PUM1-222	ENST00000531867	MTUS2	Q5JR59	1369 aa		9.07	□□□□□ -0.96
PUM1-222	ENST00000531867	AHDC1	Q5TGY3	1603 aa	Predicted RBP	9.06	□□□□□ -0.96
PUM1-222	ENST00000531867	CEP152	O94986	1710 aa		9.06	□□□□□ -0.96
PUM1-222	ENST00000531867	SLC35F4	A4IF30	521 aa		9.06	□□□□□ -0.96
PUM1-222	ENST00000531867	WIPF1	O43516	503 aa		9.06	□□□□□ -0.96
PUM1-222	ENST00000531867	TSGA10IP	Q3SY00	556 aa		9.06	□□□□□ -0.96
PUM1-222	ENST00000531867	ESYT1	Q9BSJ8	1104 aa		9.06	□□□□□ -0.96
PUM1-222	ENST00000531867	MSH6	P52701	1360 aa		9.06	□□□□□ -0.96
PUM1-222	ENST00000531867	EHBP1L1	Q8N3D4	1523 aa		9.05	□□□□□ -0.96
PUM1-222	ENST00000531867	PIK3C2B	O00750	1634 aa		9.05	□□□□□ -0.96
PUM1-222	ENST00000531867	MAST1	Q9Y2H9	1570 aa		9.05	□□□□□ -0.96
PUM1-222	ENST00000531867	POM121C	A8CG34	1229 aa		9.05	□□□□□ -0.96
PUM1-222	ENST00000531867	SKI	P12755	728 aa		9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms