RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 TNRQ92752 1358 aa13.47□□□□□ -0.25
NXF1-211ENST00000531709 IBTKQ9P2D0 1353 aaPredicted RBP13.47□□□□□ -0.25
NXF1-211ENST00000531709 KCNQ3O43525 872 aa13.47□□□□□ -0.25
NXF1-211ENST00000531709 MTERF4Q7Z6M4 381 aaKnown RBP13.47□□□□□ -0.25
NXF1-211ENST00000531709 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
NXF1-211ENST00000531709 ZC3H13Q5T200 1668 aaKnown RBP13.47□□□□□ -0.25
NXF1-211ENST00000531709 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
NXF1-211ENST00000531709 CBX1P83916 185 aa13.47□□□□□ -0.25
NXF1-211ENST00000531709 ADGRB2O60241 1585 aa13.46□□□□□ -0.25
NXF1-211ENST00000531709 SH2B1Q9NRF2 756 aaPredicted RBP13.46□□□□□ -0.25
NXF1-211ENST00000531709 ARHGAP31Q2M1Z3 1444 aa13.46□□□□□ -0.25
NXF1-211ENST00000531709 TTC21AQ8NDW8 1320 aa13.46□□□□□ -0.25
NXF1-211ENST00000531709 DYNC1I1O14576 645 aa13.46□□□□□ -0.25
NXF1-211ENST00000531709 KDM4AO75164 1064 aa13.46□□□□□ -0.25
NXF1-211ENST00000531709 GNL2Q13823 731 aaKnown RBP13.46□□□□□ -0.25
NXF1-211ENST00000531709 ROBO2Q9HCK4 1378 aa13.46□□□□□ -0.25
NXF1-211ENST00000531709 RAD50Q92878 1312 aa13.46□□□□□ -0.25
NXF1-211ENST00000531709 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.26
NXF1-211ENST00000531709 HIP1O00291 1037 aa13.46□□□□□ -0.26
NXF1-211ENST00000531709 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.26
NXF1-211ENST00000531709 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.26
NXF1-211ENST00000531709 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.26
NXF1-211ENST00000531709 EVI5LQ96CN4 794 aa13.46□□□□□ -0.26
NXF1-211ENST00000531709 FMNL2Q96PY5 1086 aa13.46□□□□□ -0.26
NXF1-211ENST00000531709 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.26
NXF1-211ENST00000531709 PPLO60437 1756 aa13.46□□□□□ -0.26
NXF1-211ENST00000531709 CUL4AQ13619 759 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 TPD52L1Q16890 204 aaPredicted RBP13.45□□□□□ -0.26
NXF1-211ENST00000531709 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
NXF1-211ENST00000531709 KLHDC4Q8TBB5 520 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 ZNF500O60304 480 aaPredicted RBP13.45□□□□□ -0.26
NXF1-211ENST00000531709 CFAP74Q9C0B2 1584 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 ATP10DQ9P241 1426 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
NXF1-211ENST00000531709 PTH1RQ03431 593 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 UVSSAQ2YD98 709 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 SSH3Q8TE77 659 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 FAM227BQ96M60 508 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 MYO3AQ8NEV4 1616 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 NPHP1O15259 732 aa13.45□□□□□ -0.26
NXF1-211ENST00000531709 NMIQ13287 307 aaPredicted RBP13.44□□□□□ -0.26
NXF1-211ENST00000531709 ANKRD1Q15327 319 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 CCDC73Q6ZRK6 1079 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 C16orf45Q96MC5 204 aaPredicted RBP13.44□□□□□ -0.26
NXF1-211ENST00000531709 SDF4Q9BRK5 362 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 IL25Q9H293 177 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 ADCK5Q3MIX3 580 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 GUCY1B3Q02153 619 aa13.44□□□□□ -0.26
NXF1-211ENST00000531709 NRDCO43847 1150 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 SLC39A6Q13433 755 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 MYD88Q99836 296 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 NEURL4Q96JN8 1562 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 STAP2Q9UGK3 403 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 CREB3L3Q68CJ9 461 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
NXF1-211ENST00000531709 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
NXF1-211ENST00000531709 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
NXF1-211ENST00000531709 PIK3C2BO00750 1634 aa13.42□□□□□ -0.26
NXF1-211ENST00000531709 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
NXF1-211ENST00000531709 ME1P48163 572 aa13.42□□□□□ -0.26
NXF1-211ENST00000531709 VIRMAQ69YN4 1812 aaKnown RBP13.42□□□□□ -0.26
NXF1-211ENST00000531709 LARGE1O95461 756 aa13.42□□□□□ -0.26
NXF1-211ENST00000531709 TPM3P06753 285 aa13.42□□□□□ -0.26
NXF1-211ENST00000531709 SCAND2PQ9GZW5 306 aaPredicted RBP13.42□□□□□ -0.26
NXF1-211ENST00000531709 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
NXF1-211ENST00000531709 CCDC186Q7Z3E2 898 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 PDLIM2Q96JY6 352 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
NXF1-211ENST00000531709 KCNA6P17658 529 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 CCT2P78371 535 aaKnown RBP13.41□□□□□ -0.26
NXF1-211ENST00000531709 ANO6Q4KMQ2 910 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 NBPF6Q5VWK0 638 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 NBPF4Q96M43 638 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 CPS1P31327 1500 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 ZNF165P49910 485 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 ME3Q16798 604 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 WASHC4Q2M389 1173 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 EDC3Q96F86 508 aaKnown RBP13.41□□□□□ -0.26
NXF1-211ENST00000531709 PDCL2Q8N4E4 241 aa13.41□□□□□ -0.26
NXF1-211ENST00000531709 LSG1Q9H089 658 aaKnown RBP13.41□□□□□ -0.26
NXF1-211ENST00000531709 GRM8O00222 908 aa13.4□□□□□ -0.26
NXF1-211ENST00000531709 CPLX1O14810 134 aa13.4□□□□□ -0.26
NXF1-211ENST00000531709 PTGS1P23219 599 aa13.4□□□□□ -0.26
NXF1-211ENST00000531709 RGS12O14924 1447 aa13.4□□□□□ -0.26
NXF1-211ENST00000531709 A2ML1A8K2U0 1454 aa13.4□□□□□ -0.26
NXF1-211ENST00000531709 ARHGEF10O15013 1369 aa13.4□□□□□ -0.26
NXF1-211ENST00000531709 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
NXF1-211ENST00000531709 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
NXF1-211ENST00000531709 CCDC171Q6TFL3 1326 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms