RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 CNBD1Q8NA66 436 aa14.27□□□□□ -0.13
CHEK1-212ENST00000531607 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.13
CHEK1-212ENST00000531607 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
CHEK1-212ENST00000531607 MKRN1Q9UHC7 482 aaKnown RBP14.27□□□□□ -0.13
CHEK1-212ENST00000531607 ST5P78524 1137 aa14.26□□□□□ -0.13
CHEK1-212ENST00000531607 PRPF40BQ6NWY9 871 aaKnown RBP14.26□□□□□ -0.13
CHEK1-212ENST00000531607 ZNF790Q6PG37 636 aa14.26□□□□□ -0.13
CHEK1-212ENST00000531607 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
CHEK1-212ENST00000531607 DDNO94850 711 aaPredicted RBP14.25□□□□□ -0.13
CHEK1-212ENST00000531607 POTEIP0CG38 1075 aa14.25□□□□□ -0.13
CHEK1-212ENST00000531607 POTEJP0CG39 1038 aa14.25□□□□□ -0.13
CHEK1-212ENST00000531607 IL6STP40189 918 aaPredicted RBP14.25□□□□□ -0.13
CHEK1-212ENST00000531607 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
CHEK1-212ENST00000531607 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
CHEK1-212ENST00000531607 TEX13AQ9BXU3 409 aaPredicted RBP14.25□□□□□ -0.13
CHEK1-212ENST00000531607 GNAT3A8MTJ3 354 aa14.24□□□□□ -0.13
CHEK1-212ENST00000531607 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
CHEK1-212ENST00000531607 SOGA3Q5TF21 947 aa14.24□□□□□ -0.13
CHEK1-212ENST00000531607 STYK1Q6J9G0 422 aa14.24□□□□□ -0.13
CHEK1-212ENST00000531607 U3KPZ7 1027 aaPredicted RBP14.24□□□□□ -0.13
CHEK1-212ENST00000531607 CNTNAP1P78357 1384 aa14.23□□□□□ -0.13
CHEK1-212ENST00000531607 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
CHEK1-212ENST00000531607 IQCA1LA6NCM1 817 aa14.23□□□□□ -0.13
CHEK1-212ENST00000531607 U2SURPO15042 1029 aaKnown RBP14.23□□□□□ -0.13
CHEK1-212ENST00000531607 SRGNP10124 158 aa14.23□□□□□ -0.13
CHEK1-212ENST00000531607 GAS2L2Q8NHY3 880 aa14.23□□□□□ -0.13
CHEK1-212ENST00000531607 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
CHEK1-212ENST00000531607 KDM3BQ7LBC6 1761 aa14.22□□□□□ -0.13
CHEK1-212ENST00000531607 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
CHEK1-212ENST00000531607 A1BGP04217 495 aa14.22□□□□□ -0.13
CHEK1-212ENST00000531607 DZIP3Q86Y13 1208 aaKnown RBP14.22□□□□□ -0.13
CHEK1-212ENST00000531607 IL17REQ8NFR9 667 aa14.22□□□□□ -0.13
CHEK1-212ENST00000531607 MASTLQ96GX5 879 aa14.22□□□□□ -0.13
CHEK1-212ENST00000531607 LDHDQ86WU2 507 aa14.21□□□□□ -0.13
CHEK1-212ENST00000531607 THSD7BQ9C0I4 1608 aa14.21□□□□□ -0.13
CHEK1-212ENST00000531607 CEMIPQ8WUJ3 1361 aa14.21□□□□□ -0.14
CHEK1-212ENST00000531607 FOXN1O15353 648 aa14.2□□□□□ -0.14
CHEK1-212ENST00000531607 CNGB1Q14028 1251 aaPredicted RBP14.2□□□□□ -0.14
CHEK1-212ENST00000531607 CCDC93Q567U6 631 aa14.2□□□□□ -0.14
CHEK1-212ENST00000531607 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
CHEK1-212ENST00000531607 AIDAQ96BJ3 306 aa14.2□□□□□ -0.14
CHEK1-212ENST00000531607 PASKQ96RG2 1323 aa14.19□□□□□ -0.14
CHEK1-212ENST00000531607 PIP4K2AP48426 406 aaPredicted RBP14.19□□□□□ -0.14
CHEK1-212ENST00000531607 EAPPQ56P03 285 aaPredicted RBP14.19□□□□□ -0.14
CHEK1-212ENST00000531607 L3MBTL3Q96JM7 780 aaPredicted RBP14.19□□□□□ -0.14
CHEK1-212ENST00000531607 TAF1DQ9H5J8 278 aaPredicted RBP14.19□□□□□ -0.14
CHEK1-212ENST00000531607 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
CHEK1-212ENST00000531607 LTBP1Q14766 1721 aa14.18□□□□□ -0.14
CHEK1-212ENST00000531607 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
CHEK1-212ENST00000531607 BTBD11A6QL63 1104 aa14.18□□□□□ -0.14
CHEK1-212ENST00000531607 LAMB2P55268 1798 aa14.18□□□□□ -0.14
CHEK1-212ENST00000531607 ANKRD36CQ5JPF3 1778 aa14.18□□□□□ -0.14
CHEK1-212ENST00000531607 TMEM88BA6NKF7 163 aa14.17□□□□□ -0.14
CHEK1-212ENST00000531607 KCNQ3O43525 872 aa14.17□□□□□ -0.14
CHEK1-212ENST00000531607 NPR1P16066 1061 aa14.17□□□□□ -0.14
CHEK1-212ENST00000531607 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHEK1-212ENST00000531607 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
CHEK1-212ENST00000531607 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
CHEK1-212ENST00000531607 PER1O15534 1290 aaPredicted RBP14.16□□□□□ -0.14
CHEK1-212ENST00000531607 CTCFP49711 727 aaPredicted RBP14.16□□□□□ -0.14
CHEK1-212ENST00000531607 VEGFBP49765 207 aa14.16□□□□□ -0.14
CHEK1-212ENST00000531607 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
CHEK1-212ENST00000531607 HACL1Q9UJ83 578 aa14.16□□□□□ -0.14
CHEK1-212ENST00000531607 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 NPC1L1Q9UHC9 1359 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 PRAMEF22A3QJZ6 481 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 PRKAR2BP31323 418 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 EPHX2P34913 555 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 OLFM4Q6UX06 510 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 CCER1Q8TC90 406 aaPredicted RBP14.15□□□□□ -0.14
CHEK1-212ENST00000531607 C7orf43Q8WVR3 580 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 USP16Q9Y5T5 823 aa14.15□□□□□ -0.14
CHEK1-212ENST00000531607 COL4A5P29400 1685 aa14.14□□□□□ -0.15
CHEK1-212ENST00000531607 FAM177BA6PVY3 158 aa14.14□□□□□ -0.15
CHEK1-212ENST00000531607 ITGBL1O95965 494 aaPredicted RBP14.14□□□□□ -0.15
CHEK1-212ENST00000531607 NIP7Q9Y221 180 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHEK1-212ENST00000531607 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
CHEK1-212ENST00000531607 SNRPA1P09661 255 aaKnown RBP14.13□□□□□ -0.15
CHEK1-212ENST00000531607 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
CHEK1-212ENST00000531607 TPTE2Q6XPS3 522 aa14.13□□□□□ -0.15
CHEK1-212ENST00000531607 RTKN2Q8IZC4 609 aa14.13□□□□□ -0.15
CHEK1-212ENST00000531607 PHACTR3Q96KR7 559 aa14.13□□□□□ -0.15
CHEK1-212ENST00000531607 RSPH6AQ9H0K4 717 aa14.13□□□□□ -0.15
CHEK1-212ENST00000531607 LBX1P52954 281 aa14.12□□□□□ -0.15
CHEK1-212ENST00000531607 MAP1SQ66K74 1059 aaPredicted RBP14.12□□□□□ -0.15
CHEK1-212ENST00000531607 PNMA8AQ86V59 439 aaPredicted RBP14.12□□□□□ -0.15
CHEK1-212ENST00000531607 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
CHEK1-212ENST00000531607 CFAP53Q96M91 514 aa14.12□□□□□ -0.15
CHEK1-212ENST00000531607 SNED1Q8TER0 1413 aa14.12□□□□□ -0.15
CHEK1-212ENST00000531607 ABCC12Q96J65 1359 aa14.11□□□□□ -0.15
CHEK1-212ENST00000531607 TNRC18O15417 2968 aaPredicted RBP14.11□□□□□ -0.15
CHEK1-212ENST00000531607 KLRG2A4D1S0 409 aaPredicted RBP14.11□□□□□ -0.15
CHEK1-212ENST00000531607 TAF1P21675 1872 aa14.11□□□□□ -0.15
CHEK1-212ENST00000531607 GTF2E1P29083 439 aaPredicted RBP14.11□□□□□ -0.15
CHEK1-212ENST00000531607 MCM10Q7L590 875 aa14.11□□□□□ -0.15
CHEK1-212ENST00000531607 GPC2Q8N158 579 aa14.11□□□□□ -0.15
CHEK1-212ENST00000531607 WBP1LQ9NX94 342 aa14.11□□□□□ -0.15
CHEK1-212ENST00000531607 ABT1Q9ULW3 272 aaKnown RBP14.11□□□□□ -0.15
CHEK1-212ENST00000531607 CASP8AP2Q9UKL3 1982 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms