RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 CABP1Q9NZU7 370 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 GJA3Q9Y6H8 435 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 SPDYE3A6NKU9 549 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 SOCS7O14512 581 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 SIN3BO75182 1162 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 H2AFB1P0C5Y9 115 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 H2AFB2P0C5Z0 115 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 TATP17735 454 aaPredicted RBP4.16□□□□□ -1.74
RC3H1-206ENST00000531594 ALAS2P22557 587 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 SLFNL1Q499Z3 407 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 TBCELQ5QJ74 424 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 IL27Q8NEV9 243 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 C7orf43Q8WVR3 580 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 TNFRSF25Q93038 417 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 GOPCQ9HD26 462 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 PRDM6Q9NQX0 595 aa4.16□□□□□ -1.74
RC3H1-206ENST00000531594 A0A0A0MRY4 1105 aa4.15□□□□□ -1.75
RC3H1-206ENST00000531594 VAC14Q08AM6 782 aa4.15□□□□□ -1.75
RC3H1-206ENST00000531594 TRAPPC3LQ5T215 181 aa4.15□□□□□ -1.75
RC3H1-206ENST00000531594 ZNF592Q92610 1267 aa4.15□□□□□ -1.75
RC3H1-206ENST00000531594 TP53INP1Q96A56 240 aa4.15□□□□□ -1.75
RC3H1-206ENST00000531594 SLC4A9Q96Q91 983 aa4.15□□□□□ -1.75
RC3H1-206ENST00000531594 SSBP4Q9BWG4 385 aaPredicted RBP4.15□□□□□ -1.75
RC3H1-206ENST00000531594 PIK3CDO00329 1044 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 CDK2AP1O14519 115 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 SPEM2Q0P670 501 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 LAMC2Q13753 1193 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 MCTP1Q6DN14 999 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 TXNRD3Q86VQ6 643 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 PLPP7Q8NBV4 271 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 HSH2DQ96JZ2 352 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 NACC1Q96RE7 527 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 PCDHGA11Q9Y5H2 935 aa4.14□□□□□ -1.75
RC3H1-206ENST00000531594 EML1O00423 815 aa4.13□□□□□ -1.75
RC3H1-206ENST00000531594 BANK1Q8NDB2 785 aa4.13□□□□□ -1.75
RC3H1-206ENST00000531594 NUDT8Q8WV74 236 aa4.13□□□□□ -1.75
RC3H1-206ENST00000531594 L3MBTL2Q969R5 705 aa4.13□□□□□ -1.75
RC3H1-206ENST00000531594 KRTAP4-7Q9BYR0 210 aa4.13□□□□□ -1.75
RC3H1-206ENST00000531594 NAGPAQ9UK23 515 aa4.13□□□□□ -1.75
RC3H1-206ENST00000531594 C9orf172C9J069 976 aa4.12□□□□□ -1.75
RC3H1-206ENST00000531594 ELNP15502 786 aa4.12□□□□□ -1.75
RC3H1-206ENST00000531594 EPHA4P54764 986 aa4.12□□□□□ -1.75
RC3H1-206ENST00000531594 TBC1D8BQ0IIM8 1120 aa4.12□□□□□ -1.75
RC3H1-206ENST00000531594 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.12□□□□□ -1.75
RC3H1-206ENST00000531594 LENG1Q96BZ8 264 aaPredicted RBP4.12□□□□□ -1.75
RC3H1-206ENST00000531594 ARID1BQ8NFD5 2236 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-206ENST00000531594 NOS2P35228 1153 aa4.11□□□□□ -1.75
RC3H1-206ENST00000531594 EIF4G2P78344 907 aaKnown RBP eCLIP4.11□□□□□ -1.75
RC3H1-206ENST00000531594 PLAURQ03405 335 aa4.11□□□□□ -1.75
RC3H1-206ENST00000531594 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
RC3H1-206ENST00000531594 ILDR2Q71H61 639 aa4.11□□□□□ -1.75
RC3H1-206ENST00000531594 ZNF280CQ8ND82 737 aa4.11□□□□□ -1.75
RC3H1-206ENST00000531594 ZNF358Q9NW07 568 aa4.11□□□□□ -1.75
RC3H1-206ENST00000531594 SCHIP1Q9P0W5 487 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-206ENST00000531594 LILRB5O75023 590 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 AFF1P51825 1210 aaKnown RBP4.1□□□□□ -1.75
RC3H1-206ENST00000531594 TEAD4Q15561 434 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 SLC9A9Q8IVB4 645 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 DMRTC2Q8IXT2 367 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-206ENST00000531594 TNS4Q8IZW8 715 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 FMR1NBQ8N0W7 255 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-206ENST00000531594 BHMTQ93088 406 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 SIRT1Q96EB6 747 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 MEGF10Q96KG7 1140 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 IGFLR1Q9H665 355 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 JPH1Q9HDC5 661 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-206ENST00000531594 BRD7Q9NPI1 651 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 USP21Q9UK80 565 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 SLC6A14Q9UN76 642 aa4.1□□□□□ -1.75
RC3H1-206ENST00000531594 NOS3P29474 1203 aa4.09□□□□□ -1.75
RC3H1-206ENST00000531594 IREB2P48200 963 aaKnown RBP4.09□□□□□ -1.75
RC3H1-206ENST00000531594 TYRO3Q06418 890 aa4.09□□□□□ -1.75
RC3H1-206ENST00000531594 CEP63Q96MT8 703 aa4.09□□□□□ -1.75
RC3H1-206ENST00000531594 UBE2OQ9C0C9 1292 aaKnown RBP4.09□□□□□ -1.75
RC3H1-206ENST00000531594 RNF112Q9ULX5 631 aa4.09□□□□□ -1.75
RC3H1-206ENST00000531594 ZNF232Q9UNY5 417 aa4.09□□□□□ -1.75
RC3H1-206ENST00000531594 SFI1A8K8P3 1242 aa4.08□□□□□ -1.76
RC3H1-206ENST00000531594 SSTR4P31391 388 aa4.08□□□□□ -1.76
RC3H1-206ENST00000531594 GTF2IP78347 998 aa4.08□□□□□ -1.76
RC3H1-206ENST00000531594 MAP7D1Q3KQU3 841 aa4.08□□□□□ -1.76
RC3H1-206ENST00000531594 PSAPL1Q6NUJ1 521 aa4.08□□□□□ -1.76
RC3H1-206ENST00000531594 RHPN1Q8TCX5 695 aa4.08□□□□□ -1.76
RC3H1-206ENST00000531594 WFDC12Q8WWY7 111 aa4.08□□□□□ -1.76
RC3H1-206ENST00000531594 HCN4Q9Y3Q4 1203 aa4.08□□□□□ -1.76
RC3H1-206ENST00000531594 COL17A1Q9UMD9 1497 aaPredicted RBP4.07□□□□□ -1.76
RC3H1-206ENST00000531594 MED26O95402 600 aa4.07□□□□□ -1.76
RC3H1-206ENST00000531594 RAC1P63000 192 aa4.07□□□□□ -1.76
RC3H1-206ENST00000531594 NEUROD2Q15784 382 aa4.07□□□□□ -1.76
RC3H1-206ENST00000531594 GDPD2Q9HCC8 539 aa4.07□□□□□ -1.76
RC3H1-206ENST00000531594 DNAJB12Q9NXW2 375 aaKnown RBP4.07□□□□□ -1.76
RC3H1-206ENST00000531594 KIAA1024Q9UPX6 916 aa4.07□□□□□ -1.76
RC3H1-206ENST00000531594 KCNH4Q9UQ05 1017 aa4.07□□□□□ -1.76
RC3H1-206ENST00000531594 SERTM1A2A2V5 107 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 ADAMTS4O75173 837 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 GRNP28799 593 aaKnown RBP4.06□□□□□ -1.76
RC3H1-206ENST00000531594 KCNQ4P56696 695 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 GRIK5Q16478 980 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 PRR23CQ6ZRP0 262 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 DEPDC4Q8N2C3 294 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 SUSD3Q96L08 255 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms