RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LZTS3O60299 673 aaPredicted RBP10.91□□□□□ -0.66
PTPRK-220ENST00000531466 SPATA31C1P0DKV0 1188 aa10.91□□□□□ -0.66
PTPRK-220ENST00000531466 ITGB7P26010 798 aa10.91□□□□□ -0.66
PTPRK-220ENST00000531466 SH3PXD2AQ5TCZ1 1133 aa10.91□□□□□ -0.66
PTPRK-220ENST00000531466 GATA4P43694 442 aa10.9□□□□□ -0.66
PTPRK-220ENST00000531466 SFSWAPQ12872 951 aaKnown RBP10.9□□□□□ -0.66
PTPRK-220ENST00000531466 POM121Q96HA1 1249 aa10.9□□□□□ -0.66
PTPRK-220ENST00000531466 SLC30A3Q99726 388 aa10.9□□□□□ -0.66
PTPRK-220ENST00000531466 MDFIQ99750 246 aa10.89□□□□□ -0.67
PTPRK-220ENST00000531466 SERTM1A2A2V5 107 aa10.88□□□□□ -0.67
PTPRK-220ENST00000531466 TPCN2Q8NHX9 752 aa10.88□□□□□ -0.67
PTPRK-220ENST00000531466 RHPN1Q8TCX5 695 aa10.88□□□□□ -0.67
PTPRK-220ENST00000531466 C7orf43Q8WVR3 580 aa10.88□□□□□ -0.67
PTPRK-220ENST00000531466 SIN3BO75182 1162 aa10.87□□□□□ -0.67
PTPRK-220ENST00000531466 RAB44Q7Z6P3 723 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-220ENST00000531466 SPDYE3A6NKU9 549 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 ADARB2-AS1A8MUL3 147 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 FAM229AH3BQW9 127 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 M0R082 166 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 PRRT3Q5FWE3 981 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 WWC1Q8IX03 1113 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 ZNF417Q8TAU3 575 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 ZNF587Q96SQ5 575 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-220ENST00000531466 KIAA1024Q9UPX6 916 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 STARD13Q9Y3M8 1113 aa10.86□□□□□ -0.67
PTPRK-220ENST00000531466 C8orf86Q6ZUL3 223 aa10.85□□□□□ -0.67
PTPRK-220ENST00000531466 TRIM50Q86XT4 487 aa10.85□□□□□ -0.67
PTPRK-220ENST00000531466 HSH2DQ96JZ2 352 aa10.85□□□□□ -0.67
PTPRK-220ENST00000531466 GPC6Q9Y625 555 aaPredicted RBP10.85□□□□□ -0.67
PTPRK-220ENST00000531466 SPEM2Q0P670 501 aa10.84□□□□□ -0.67
PTPRK-220ENST00000531466 TSPAN10Q9H1Z9 355 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-220ENST00000531466 HCN4Q9Y3Q4 1203 aa10.84□□□□□ -0.67
PTPRK-220ENST00000531466 POM121CA8CG34 1229 aa10.83□□□□□ -0.68
PTPRK-220ENST00000531466 APBA3O96018 575 aa10.83□□□□□ -0.68
PTPRK-220ENST00000531466 ALBP02768 609 aa10.83□□□□□ -0.68
PTPRK-220ENST00000531466 COL9A3Q14050 684 aaPredicted RBP10.83□□□□□ -0.68
PTPRK-220ENST00000531466 CCDC102BQ68D86 513 aa10.83□□□□□ -0.68
PTPRK-220ENST00000531466 TNFRSF25Q93038 417 aa10.83□□□□□ -0.68
PTPRK-220ENST00000531466 CEP63Q96MT8 703 aa10.83□□□□□ -0.68
PTPRK-220ENST00000531466 USP17L3A6NCW0 530 aa10.82□□□□□ -0.68
PTPRK-220ENST00000531466 USP17L4A6NCW7 530 aa10.82□□□□□ -0.68
PTPRK-220ENST00000531466 ZBTB7BO15156 539 aaPredicted RBP10.82□□□□□ -0.68
PTPRK-220ENST00000531466 ADH7P40394 386 aa10.82□□□□□ -0.68
PTPRK-220ENST00000531466 PSMA6P60900 246 aaKnown RBP10.82□□□□□ -0.68
PTPRK-220ENST00000531466 CLDN10P78369 228 aa10.82□□□□□ -0.68
PTPRK-220ENST00000531466 USP17L2Q6R6M4 530 aa10.82□□□□□ -0.68
PTPRK-220ENST00000531466 USP17L1Q7RTZ2 530 aa10.82□□□□□ -0.68
PTPRK-220ENST00000531466 ADAMTS19Q8TE59 1207 aa10.82□□□□□ -0.68
PTPRK-220ENST00000531466 BRD7Q9NPI1 651 aa10.82□□□□□ -0.68
PTPRK-220ENST00000531466 ZMYM1Q5SVZ6 1142 aa10.81□□□□□ -0.68
PTPRK-220ENST00000531466 MICALL1Q8N3F8 863 aa10.81□□□□□ -0.68
PTPRK-220ENST00000531466 PHACTR1Q9C0D0 580 aa10.81□□□□□ -0.68
PTPRK-220ENST00000531466 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
PTPRK-220ENST00000531466 NEUROD1Q13562 356 aa10.8□□□□□ -0.68
PTPRK-220ENST00000531466 RSPO4Q2I0M5 234 aaPredicted RBP10.8□□□□□ -0.68
PTPRK-220ENST00000531466 ZNF280CQ8ND82 737 aa10.8□□□□□ -0.68
PTPRK-220ENST00000531466 TPSG1Q9NRR2 321 aa10.8□□□□□ -0.68
PTPRK-220ENST00000531466 RAD21O60216 631 aa10.79□□□□□ -0.68
PTPRK-220ENST00000531466 ATP1A2P50993 1020 aa10.79□□□□□ -0.68
PTPRK-220ENST00000531466 C1orf53Q5VUE5 145 aa10.79□□□□□ -0.68
PTPRK-220ENST00000531466 PLEKHM2Q8IWE5 1019 aa10.79□□□□□ -0.68
PTPRK-220ENST00000531466 PRDM6Q9NQX0 595 aa10.79□□□□□ -0.68
PTPRK-220ENST00000531466 CHMP3Q9Y3E7 222 aa10.79□□□□□ -0.68
PTPRK-220ENST00000531466 TRIM28Q13263 835 aaKnown RBP10.78□□□□□ -0.68
PTPRK-220ENST00000531466 UCN2Q96RP3 112 aa10.78□□□□□ -0.68
PTPRK-220ENST00000531466 ANKIB1Q9P2G1 1089 aa10.78□□□□□ -0.68
PTPRK-220ENST00000531466 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
PTPRK-220ENST00000531466 NID1P14543 1247 aa10.77□□□□□ -0.69
PTPRK-220ENST00000531466 HIRAP54198 1017 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-220ENST00000531466 TYRO3Q06418 890 aa10.77□□□□□ -0.69
PTPRK-220ENST00000531466 NKAPLQ5M9Q1 402 aa10.77□□□□□ -0.69
PTPRK-220ENST00000531466 OGFOD1Q8N543 542 aa10.77□□□□□ -0.69
PTPRK-220ENST00000531466 TSEN2Q8NCE0 465 aaKnown RBP10.77□□□□□ -0.69
PTPRK-220ENST00000531466 SUSD3Q96L08 255 aa10.77□□□□□ -0.69
PTPRK-220ENST00000531466 TBC1D8BQ0IIM8 1120 aa10.76□□□□□ -0.69
PTPRK-220ENST00000531466 GRIK4Q16099 956 aa10.76□□□□□ -0.69
PTPRK-220ENST00000531466 HDGFL1Q5TGJ6 251 aa10.76□□□□□ -0.69
PTPRK-220ENST00000531466 BHMTQ93088 406 aa10.76□□□□□ -0.69
PTPRK-220ENST00000531466 ZNF594Q96JF6 807 aaPredicted RBP10.76□□□□□ -0.69
PTPRK-220ENST00000531466 PPP1R12BO60237 982 aaPredicted RBP10.75□□□□□ -0.69
PTPRK-220ENST00000531466 KCNQ4P56696 695 aa10.75□□□□□ -0.69
PTPRK-220ENST00000531466 KRTAP4-8Q9BYQ9 185 aa10.75□□□□□ -0.69
PTPRK-220ENST00000531466 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
PTPRK-220ENST00000531466 ATP9BO43861 1147 aa10.74□□□□□ -0.69
PTPRK-220ENST00000531466 POTEAQ6S8J7 498 aa10.74□□□□□ -0.69
PTPRK-220ENST00000531466 C20orf204Q6ZNR8 217 aa10.74□□□□□ -0.69
PTPRK-220ENST00000531466 LARGE2Q8N3Y3 721 aa10.74□□□□□ -0.69
PTPRK-220ENST00000531466 NACC1Q96RE7 527 aa10.74□□□□□ -0.69
PTPRK-220ENST00000531466 PALM3A6NDB9 673 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-220ENST00000531466 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
PTPRK-220ENST00000531466 FOXD4L6Q3SYB3 417 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-220ENST00000531466 TRAPPC3LQ5T215 181 aa10.73□□□□□ -0.69
PTPRK-220ENST00000531466 FOXD4L3Q6VB84 417 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-220ENST00000531466 IGFLR1Q9H665 355 aa10.73□□□□□ -0.69
PTPRK-220ENST00000531466 SCO2A0A1W2PP80 73 aa10.72□□□□□ -0.69
PTPRK-220ENST00000531466 M0R2N6 131 aa10.72□□□□□ -0.69
PTPRK-220ENST00000531466 DYRK3O43781 588 aa10.72□□□□□ -0.69
PTPRK-220ENST00000531466 C21orf2O43822 256 aa10.72□□□□□ -0.69
PTPRK-220ENST00000531466 UBE2OQ9C0C9 1292 aaKnown RBP10.72□□□□□ -0.69
PTPRK-220ENST00000531466 LILRB5O75023 590 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms