RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 A1BGP04217 495 aa12.45□□□□□ -0.42
CHMP4A-205ENST00000531158 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
CHMP4A-205ENST00000531158 BRIP1Q9BX63 1249 aa12.45□□□□□ -0.42
CHMP4A-205ENST00000531158 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-205ENST00000531158 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
CHMP4A-205ENST00000531158 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
CHMP4A-205ENST00000531158 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
CHMP4A-205ENST00000531158 STARD3NLO95772 234 aa12.44□□□□□ -0.42
CHMP4A-205ENST00000531158 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-205ENST00000531158 PIP4K2AP48426 406 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-205ENST00000531158 TTC5Q8N0Z6 440 aa12.44□□□□□ -0.42
CHMP4A-205ENST00000531158 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-205ENST00000531158 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
CHMP4A-205ENST00000531158 LTBP3Q9NS15 1303 aa12.43□□□□□ -0.42
CHMP4A-205ENST00000531158 A0A087WZG4 1122 aa12.43□□□□□ -0.42
CHMP4A-205ENST00000531158 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
CHMP4A-205ENST00000531158 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.422e-11■■■■□ 22.3
CHMP4A-205ENST00000531158 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
CHMP4A-205ENST00000531158 SRGNP10124 158 aa12.42□□□□□ -0.42
CHMP4A-205ENST00000531158 PDE6BP35913 854 aa12.42□□□□□ -0.42
CHMP4A-205ENST00000531158 TEFQ10587 303 aa12.42□□□□□ -0.42
CHMP4A-205ENST00000531158 ERFEQ4G0M1 354 aa12.42□□□□□ -0.42
CHMP4A-205ENST00000531158 SNED1Q8TER0 1413 aa12.42□□□□□ -0.42
CHMP4A-205ENST00000531158 LTBP1Q14766 1721 aa12.42□□□□□ -0.42
CHMP4A-205ENST00000531158 COL4A5P29400 1685 aa12.42□□□□□ -0.42
CHMP4A-205ENST00000531158 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
CHMP4A-205ENST00000531158 DDNO94850 711 aaPredicted RBP12.41□□□□□ -0.42
CHMP4A-205ENST00000531158 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
CHMP4A-205ENST00000531158 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
CHMP4A-205ENST00000531158 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
CHMP4A-205ENST00000531158 USP16Q9Y5T5 823 aa12.41□□□□□ -0.42
CHMP4A-205ENST00000531158 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 STYK1Q6J9G0 422 aa12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 DPY19L2Q6NUT2 758 aa12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 CNBD1Q8NA66 436 aa12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 GAS2L2Q8NHY3 880 aa12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 FMNL2Q96PY5 1086 aa12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
CHMP4A-205ENST00000531158 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
CHMP4A-205ENST00000531158 PRKAR2BP31323 418 aa12.39□□□□□ -0.43
CHMP4A-205ENST00000531158 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
CHMP4A-205ENST00000531158 NBPF10Q6P3W6 841 aaKnown RBP12.39□□□□□ -0.43
CHMP4A-205ENST00000531158 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
CHMP4A-205ENST00000531158 NBPF15Q8N660 670 aa12.39□□□□□ -0.43
CHMP4A-205ENST00000531158 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
CHMP4A-205ENST00000531158 PASKQ96RG2 1323 aa12.38□□□□□ -0.43
CHMP4A-205ENST00000531158 ZNF541Q9H0D2 1346 aa12.38□□□□□ -0.43
CHMP4A-205ENST00000531158 TNRC18O15417 2968 aaPredicted RBP12.38□□□□□ -0.43
CHMP4A-205ENST00000531158 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
CHMP4A-205ENST00000531158 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
CHMP4A-205ENST00000531158 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
CHMP4A-205ENST00000531158 LAMB2P55268 1798 aa12.38□□□□□ -0.43
CHMP4A-205ENST00000531158 THSD7BQ9C0I4 1608 aa12.37□□□□□ -0.43
CHMP4A-205ENST00000531158 KLRG2A4D1S0 409 aaPredicted RBP12.37□□□□□ -0.43
CHMP4A-205ENST00000531158 MCM10Q7L590 875 aa12.37□□□□□ -0.43
CHMP4A-205ENST00000531158 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
CHMP4A-205ENST00000531158 MASTLQ96GX5 879 aa12.37□□□□□ -0.43
CHMP4A-205ENST00000531158 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
CHMP4A-205ENST00000531158 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
CHMP4A-205ENST00000531158 ST5P78524 1137 aa12.36□□□□□ -0.43
CHMP4A-205ENST00000531158 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
CHMP4A-205ENST00000531158 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
CHMP4A-205ENST00000531158 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
CHMP4A-205ENST00000531158 ITGBL1O95965 494 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-205ENST00000531158 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
CHMP4A-205ENST00000531158 DEFB115Q30KQ5 88 aa12.35□□□□□ -0.43
CHMP4A-205ENST00000531158 TAF1DQ9H5J8 278 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-205ENST00000531158 TAF1P21675 1872 aa12.34□□□□□ -0.43
CHMP4A-205ENST00000531158 HLFQ16534 295 aa12.34□□□□□ -0.43
CHMP4A-205ENST00000531158 CLEC4GQ6UXB4 293 aa12.34□□□□□ -0.43
CHMP4A-205ENST00000531158 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
CHMP4A-205ENST00000531158 BEGAINQ9BUH8 593 aa12.34□□□□□ -0.43
CHMP4A-205ENST00000531158 ZNF277Q9NRM2 450 aaPredicted RBP12.34□□□□□ -0.43
CHMP4A-205ENST00000531158 WDR33Q9C0J8 1336 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-205ENST00000531158 SNRPA1P09661 255 aaKnown RBP12.33□□□□□ -0.44
CHMP4A-205ENST00000531158 FKBP4Q02790 459 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHMP4A-205ENST00000531158 CCDC93Q567U6 631 aa12.33□□□□□ -0.44
CHMP4A-205ENST00000531158 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
CHMP4A-205ENST00000531158 MCOLN1Q9GZU1 580 aa12.33□□□□□ -0.44
CHMP4A-205ENST00000531158 RASSF10A6NK89 507 aa12.32□□□□□ -0.44
CHMP4A-205ENST00000531158 NPHP1O15259 732 aa12.32□□□□□ -0.44
CHMP4A-205ENST00000531158 NPR1P16066 1061 aa12.32□□□□□ -0.44
CHMP4A-205ENST00000531158 PRPF38BQ5VTL8 546 aaKnown RBP12.32□□□□□ -0.44
CHMP4A-205ENST00000531158 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
CHMP4A-205ENST00000531158 NIP7Q9Y221 180 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHMP4A-205ENST00000531158 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
CHMP4A-205ENST00000531158 IQCA1LA6NCM1 817 aa12.31□□□□□ -0.44
CHMP4A-205ENST00000531158 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
CHMP4A-205ENST00000531158 PPP2R1AP30153 589 aa12.31□□□□□ -0.44
CHMP4A-205ENST00000531158 CRY2Q49AN0 593 aa12.31□□□□□ -0.44
CHMP4A-205ENST00000531158 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
CHMP4A-205ENST00000531158 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
CHMP4A-205ENST00000531158 RIC1Q4ADV7 1423 aa12.3□□□□□ -0.44
CHMP4A-205ENST00000531158 FZD9O00144 591 aa12.3□□□□□ -0.44
CHMP4A-205ENST00000531158 RGL2O15211 777 aa12.3□□□□□ -0.44
CHMP4A-205ENST00000531158 U2AF1L5P0DN76 240 aaPredicted RBP12.3□□□□□ -0.44
CHMP4A-205ENST00000531158 U2AF1Q01081 240 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHMP4A-205ENST00000531158 ABT1Q9ULW3 272 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms