RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPRK-219ENST00000531050 MRVI1Q9Y6F6 885 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 MROH1Q8NDA8 1641 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 H3BQF6 201 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 INTS3Q68E01 1043 aaKnown RBP9.16□□□□□ -0.94
PTPRK-219ENST00000531050 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 TRIM5Q9C035 493 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 KCND1Q9NSA2 647 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 TRMT1Q9NXH9 659 aaKnown RBP9.16□□□□□ -0.94
PTPRK-219ENST00000531050 CLIP2Q9UDT6 1046 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 POLR3AO14802 1390 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-219ENST00000531050 FANCAO15360 1455 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 NEK4P51957 841 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 TTC22Q5TAA0 569 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 CWC27Q6UX04 472 aaKnown RBP9.16□□□□□ -0.94
PTPRK-219ENST00000531050 EFCAB13Q8IY85 973 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 CCDC34Q96HJ3 373 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 FAXDC2Q96IV6 333 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 BSDC1Q9NW68 430 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-219ENST00000531050 NEURL4Q96JN8 1562 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 KIAA1210Q9ULL0 1709 aa9.16□□□□□ -0.94
PTPRK-219ENST00000531050 C21orf2O43822 256 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 CCZ1BP86790 482 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 CCZ1P86791 482 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-219ENST00000531050 PLEKHO1Q53GL0 409 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-219ENST00000531050 CC2D1AQ6P1N0 951 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-219ENST00000531050 TADA2BQ86TJ2 420 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 SIRT2Q8IXJ6 389 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 AFAP1Q8N556 730 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 KAT2BQ92831 832 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 MYOM1P52179 1685 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 SKILP12757 684 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 CDC25BP30305 580 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 MCM2P49736 904 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 TYRO3Q06418 890 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 ZKSCAN8Q15776 578 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-219ENST00000531050 DNAAF4Q8WXU2 420 aa9.15□□□□□ -0.94
PTPRK-219ENST00000531050 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
PTPRK-219ENST00000531050 SRRTQ9BXP5 876 aaKnown RBP9.15□□□□□ -0.94
PTPRK-219ENST00000531050 NEMFO60524 1076 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 SMC2O95347 1197 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 EXOSC9Q06265 439 aaKnown RBP9.14□□□□□ -0.95
PTPRK-219ENST00000531050 TTLL5Q6EMB2 1281 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 TDRD7Q8NHU6 1098 aaKnown RBP9.14□□□□□ -0.95
PTPRK-219ENST00000531050 ATAD2Q6PL18 1390 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 SHPRHQ149N8 1683 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 RTL1A6NKG5 1358 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 TTC36A6NLP5 189 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 TPM1P09493 284 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 CALRP27797 417 aaKnown RBP9.14□□□□□ -0.95
PTPRK-219ENST00000531050 KCNV1Q6PIU1 500 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 UBXN4Q92575 508 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 MED14O60244 1454 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 ADGRL1O94910 1474 aa9.14□□□□□ -0.95
PTPRK-219ENST00000531050 A0A087WUV0 522 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-219ENST00000531050 FIBPO43427 364 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 TADA3O75528 432 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 MNAT1P51948 309 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 ZRSR1Q15695 479 aaKnown RBP9.13□□□□□ -0.95
PTPRK-219ENST00000531050 TTC19Q6DKK2 380 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-219ENST00000531050 MIEF2Q96C03 454 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 FUT8Q9BYC5 575 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 C1orf115Q9H7X2 142 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 MKRN1Q9UHC7 482 aaKnown RBP9.13□□□□□ -0.95
PTPRK-219ENST00000531050 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 TCHHQ07283 1943 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 ANKRD33BA6NCL7 494 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 CLSTN1O94985 981 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 HNRNPH1P31943 449 aaKnown RBP9.13□□□□□ -0.95
PTPRK-219ENST00000531050 SSR1P43307 286 aaKnown RBP9.13□□□□□ -0.95
PTPRK-219ENST00000531050 NBPF6Q5VWK0 638 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 NAIF1Q69YI7 327 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-219ENST00000531050 NBPF5PQ86XG9 351 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-219ENST00000531050 ITFG2Q969R8 447 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 NBPF4Q96M43 638 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 IFT172Q9UG01 1749 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 ABCA6Q8N139 1617 aa9.13□□□□□ -0.95
PTPRK-219ENST00000531050 CCDC69A6NI79 296 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 SNW1Q13573 536 aaKnown RBP9.12□□□□□ -0.95
PTPRK-219ENST00000531050 ANO6Q4KMQ2 910 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 CCDC158Q5M9N0 1113 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 LRRC31Q6UY01 552 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 NOL8Q76FK4 1167 aaKnown RBP9.12□□□□□ -0.95
PTPRK-219ENST00000531050 MROH2AA6NES4 1674 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 MAP3K4Q9Y6R4 1608 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 UGGT1Q9NYU2 1555 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 H0YHG0 523 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 ZBTB7BO15156 539 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-219ENST00000531050 SGSM2O43147 1006 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 ZSCAN22P10073 491 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-219ENST00000531050 SDSP20132 328 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 SARNPP82979 210 aaKnown RBP9.12□□□□□ -0.95
PTPRK-219ENST00000531050 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
PTPRK-219ENST00000531050 MICALL1Q8N3F8 863 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 STAG1Q8WVM7 1258 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 EPC1Q9H2F5 836 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 ZBTB12Q9Y330 459 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-219ENST00000531050 EFCAB6Q5THR3 1501 aa9.12□□□□□ -0.95
PTPRK-219ENST00000531050 KIDINS220Q9ULH0 1771 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 562 ms