RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 NAA15Q9BXJ9 866 aaKnown RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 LUC7L2Q9Y383 392 aaKnown RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 PLA2R1Q13018 1463 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 MPHOSPH10O00566 681 aaKnown RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 CABP4P57796 275 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 PLCD3Q8N3E9 789 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 BTG4Q9NY30 223 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 TRPM2O94759 1503 aa8.4□□□□□ -1.06
CTNND1-229ENST00000531014 NAA25Q14CX7 972 aa8.4□□□□□ -1.06
CTNND1-229ENST00000531014 PPP4R3BQ5MIZ7 849 aa8.4□□□□□ -1.06
CTNND1-229ENST00000531014 CLEC11AQ9Y240 323 aa8.4□□□□□ -1.06
CTNND1-229ENST00000531014 SFPQP23246 707 aaKnown RBP eCLIP8.4□□□□□ -1.061e-8■■■□□ 15.1
CTNND1-229ENST00000531014 TPD52P55327 224 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-229ENST00000531014 MXRA7P84157 204 aa8.4□□□□□ -1.06
CTNND1-229ENST00000531014 SMC6Q96SB8 1091 aa8.4□□□□□ -1.06
CTNND1-229ENST00000531014 UPF3BQ9BZI7 483 aaKnown RBP8.4□□□□□ -1.06
CTNND1-229ENST00000531014 CCDC87Q9NVE4 849 aa8.4□□□□□ -1.06
CTNND1-229ENST00000531014 GOLIM4O00461 696 aa8.4□□□□□ -1.06
CTNND1-229ENST00000531014 SAMD1Q6SPF0 538 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-229ENST00000531014 API5Q9BZZ5 524 aaKnown RBP8.4□□□□□ -1.06
CTNND1-229ENST00000531014 MKRN1Q9UHC7 482 aaKnown RBP8.4□□□□□ -1.06
CTNND1-229ENST00000531014 IQSEC2Q5JU85 1478 aa8.4□□□□□ -1.07
CTNND1-229ENST00000531014 ATP2C2O75185 946 aa8.4□□□□□ -1.07
CTNND1-229ENST00000531014 KIF4AO95239 1232 aa8.4□□□□□ -1.07
CTNND1-229ENST00000531014 MICALL1Q8N3F8 863 aa8.4□□□□□ -1.07
CTNND1-229ENST00000531014 HYPKQ9NX55 129 aa8.4□□□□□ -1.07
CTNND1-229ENST00000531014 STIM2Q9P246 746 aa8.4□□□□□ -1.07
CTNND1-229ENST00000531014 COMMD10Q9Y6G5 202 aa8.4□□□□□ -1.07
CTNND1-229ENST00000531014 EFCAB6Q5THR3 1501 aa8.4□□□□□ -1.07
CTNND1-229ENST00000531014 STMN1P16949 149 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
CTNND1-229ENST00000531014 KIF6Q6ZMV9 814 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 PZPP20742 1482 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 ABCA9Q8IUA7 1624 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 DNAJC21Q5F1R6 531 aaKnown RBP8.39□□□□□ -1.07
CTNND1-229ENST00000531014 DPY19L2Q6NUT2 758 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
CTNND1-229ENST00000531014 PPFIBP2Q8ND30 876 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 SEPT8Q92599 483 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 TSNARE1Q96NA8 513 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 RSPH14Q9UHP6 348 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTNND1-229ENST00000531014 HMGB1P1B2RPK0 211 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-229ENST00000531014 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-229ENST00000531014 KRT85P78386 507 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 ZBTB17Q13105 803 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 PPP1R14CQ8TAE6 165 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 BMP2KQ9NSY1 1161 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-229ENST00000531014 TTC37Q6PGP7 1564 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 RFC4P35249 363 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 ARHGEF6Q15052 776 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 TMEM132EQ6IEE7 984 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 SEPT12Q8IYM1 358 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 KRT222Q8N1A0 295 aa8.39□□□□□ -1.07
CTNND1-229ENST00000531014 SREK1Q8WXA9 508 aaKnown RBP8.39□□□□□ -1.07
CTNND1-229ENST00000531014 CASQ2O14958 399 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 STARD3NLO95772 234 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 LIG1P18858 919 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 ME1P48163 572 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 HLTFQ14527 1009 aaKnown RBP eCLIP8.38□□□□□ -1.075e-6■□□□□ 9.8
CTNND1-229ENST00000531014 SETDB1Q15047 1291 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 MAATS1Q7Z4T9 603 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 ZHX3Q9H4I2 956 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 CWC25Q9NXE8 425 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 WDR33Q9C0J8 1336 aaKnown RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 ZNF853P0CG23 659 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 TRIM21P19474 475 aaKnown RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 IKQ13123 557 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 WASHC4Q2M389 1173 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 BCL2L13Q9BXK5 485 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 RABGAP1Q9Y3P9 1069 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 CAMSAP1Q5T5Y3 1602 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 AAMPQ13685 434 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 APBB1IPQ7Z5R6 666 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 FAM114A2Q9NRY5 505 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 NCOA3Q9Y6Q9 1424 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 PLIN1O60240 522 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 USO1O60763 962 aaKnown RBP8.38□□□□□ -1.07
CTNND1-229ENST00000531014 VPS36Q86VN1 386 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 CCDC110Q8TBZ0 833 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 DDX12PQ92771 950 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 PPP1R9BQ96SB3 815 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 RAI14Q9P0K7 980 aa8.38□□□□□ -1.07
CTNND1-229ENST00000531014 CFAP100Q494V2 611 aa8.37□□□□□ -1.07
CTNND1-229ENST00000531014 CCDC121Q6ZUS5 278 aa8.37□□□□□ -1.07
CTNND1-229ENST00000531014 TEX13AQ9BXU3 409 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-229ENST00000531014 THRAP3Q9Y2W1 955 aaKnown RBP8.37□□□□□ -1.07
CTNND1-229ENST00000531014 NSD3Q9BZ95 1437 aa8.37□□□□□ -1.07
CTNND1-229ENST00000531014 KDM5CP41229 1560 aa8.37□□□□□ -1.07
CTNND1-229ENST00000531014 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
CTNND1-229ENST00000531014 TTC36A6NLP5 189 aa8.37□□□□□ -1.07
CTNND1-229ENST00000531014 CEBPZQ03701 1054 aaKnown RBP8.37□□□□□ -1.07
CTNND1-229ENST00000531014 NCOA1Q15788 1441 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms