RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 NUTM2DQ5VT03 806 aaPredicted RBP7.23□□□□□ -1.25
PCF11-205ENST00000530906 CDK19Q9BWU1 502 aa7.23□□□□□ -1.25
PCF11-205ENST00000530906 PTCH1Q13635 1447 aa7.23□□□□□ -1.25
PCF11-205ENST00000530906 ITSN1Q15811 1721 aa7.23□□□□□ -1.25
PCF11-205ENST00000530906 COL3A1P02461 1466 aaPredicted RBP7.23□□□□□ -1.25
PCF11-205ENST00000530906 AKAP12Q02952 1782 aa7.23□□□□□ -1.25
PCF11-205ENST00000530906 AATKQ6ZMQ8 1374 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 PIK3R4Q99570 1358 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 ADAMTS13Q76LX8 1427 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 WASLO00401 505 aaPredicted RBP7.22□□□□□ -1.25
PCF11-205ENST00000530906 MLECQ14165 292 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 DESI1Q6ICB0 168 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 B4GALNT3Q6L9W6 998 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 PRR7Q8TB68 274 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 UNC93B1Q9H1C4 597 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 RBM19Q9Y4C8 960 aaKnown RBP7.22□□□□□ -1.25
PCF11-205ENST00000530906 EID1Q9Y6B2 187 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 IL16Q14005 1332 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 TOPAZ1Q8N9V7 1692 aa7.22□□□□□ -1.25
PCF11-205ENST00000530906 METP08581 1390 aa7.21□□□□□ -1.25
PCF11-205ENST00000530906 FYB1O15117 783 aa7.21□□□□□ -1.26
PCF11-205ENST00000530906 KCNH2Q12809 1159 aa7.21□□□□□ -1.26
PCF11-205ENST00000530906 TTLL12Q14166 644 aaPredicted RBP7.21□□□□□ -1.26
PCF11-205ENST00000530906 PDE3AQ14432 1141 aa7.21□□□□□ -1.26
PCF11-205ENST00000530906 GIGYF2Q6Y7W6 1299 aaKnown RBP7.21□□□□□ -1.26
PCF11-205ENST00000530906 TRIM46Q7Z4K8 759 aa7.21□□□□□ -1.26
PCF11-205ENST00000530906 WWC1Q8IX03 1113 aa7.21□□□□□ -1.26
PCF11-205ENST00000530906 ZC3H15Q8WU90 426 aaKnown RBP7.21□□□□□ -1.26
PCF11-205ENST00000530906 MYH16Q9H6N6 1097 aa7.21□□□□□ -1.26
PCF11-205ENST00000530906 CDK12Q9NYV4 1490 aaPredicted RBP7.21□□□□□ -1.26
PCF11-205ENST00000530906 RIMS1Q86UR5 1692 aaKnown RBP7.21□□□□□ -1.26
PCF11-205ENST00000530906 PPIP5K1Q6PFW1 1433 aa7.2□□□□□ -1.26
PCF11-205ENST00000530906 TCERG1O14776 1098 aaKnown RBP7.2□□□□□ -1.26
PCF11-205ENST00000530906 BMP1P13497 986 aa7.2□□□□□ -1.26
PCF11-205ENST00000530906 SAFB2Q14151 953 aaKnown RBP eCLIP7.2□□□□□ -1.26
PCF11-205ENST00000530906 LINC01559Q495D7 138 aa7.2□□□□□ -1.26
PCF11-205ENST00000530906 THEMISQ8N1K5 641 aaPredicted RBP7.2□□□□□ -1.26
PCF11-205ENST00000530906 TCP11L2Q8N4U5 519 aa7.2□□□□□ -1.26
PCF11-205ENST00000530906 BAP1Q92560 729 aa7.2□□□□□ -1.26
PCF11-205ENST00000530906 TBX22Q9Y458 520 aa7.2□□□□□ -1.26
PCF11-205ENST00000530906 WASF2Q9Y6W5 498 aa7.2□□□□□ -1.26
PCF11-205ENST00000530906 LRRC7Q96NW7 1537 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 SPDYE5A6NIY4 337 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 CAPN5O15484 640 aaPredicted RBP7.19□□□□□ -1.26
PCF11-205ENST00000530906 NEFMP07197 916 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 GJA5P36382 358 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 MTMR2Q13614 643 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 EXOC6Q8TAG9 804 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 BEGAINQ9BUH8 593 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 CABP1Q9NZU7 370 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 MAPK8IP3Q9UPT6 1336 aa7.19□□□□□ -1.26
PCF11-205ENST00000530906 ZNF142P52746 1687 aaPredicted RBP7.19□□□□□ -1.26
PCF11-205ENST00000530906 XRN1Q8IZH2 1706 aaKnown RBP7.18□□□□□ -1.26
PCF11-205ENST00000530906 NRKQ7Z2Y5 1582 aa7.18□□□□□ -1.26
PCF11-205ENST00000530906 DIAPH1O60610 1272 aaKnown RBP7.18□□□□□ -1.26
PCF11-205ENST00000530906 U2AF1L5P0DN76 240 aaPredicted RBP7.18□□□□□ -1.26
PCF11-205ENST00000530906 U2AF1Q01081 240 aaKnown RBP eCLIP7.18□□□□□ -1.26
PCF11-205ENST00000530906 INSM1Q01101 510 aaPredicted RBP7.18□□□□□ -1.26
PCF11-205ENST00000530906 CALD1Q05682 793 aaKnown RBP7.18□□□□□ -1.26
PCF11-205ENST00000530906 CENPQQ7L2Z9 268 aaPredicted RBP7.18□□□□□ -1.26
PCF11-205ENST00000530906 CCDC146Q8IYE0 955 aa7.18□□□□□ -1.26
PCF11-205ENST00000530906 MPNDQ8N594 471 aa7.18□□□□□ -1.26
PCF11-205ENST00000530906 ZNF511Q8NB15 262 aa7.18□□□□□ -1.26
PCF11-205ENST00000530906 ZNF428Q96B54 188 aa7.18□□□□□ -1.26
PCF11-205ENST00000530906 TBC1D2Q9BYX2 928 aa7.18□□□□□ -1.26
PCF11-205ENST00000530906 TLL2Q9Y6L7 1015 aa7.18□□□□□ -1.26
PCF11-205ENST00000530906 ANKARQ7Z5J8 1434 aa7.18□□□□□ -1.26
PCF11-205ENST00000530906 CEP170BQ9Y4F5 1589 aaPredicted RBP7.17□□□□□ -1.26
PCF11-205ENST00000530906 PLEKHG3A1L390 1219 aa7.17□□□□□ -1.26
PCF11-205ENST00000530906 TNNT2P45379 298 aaPredicted RBP7.17□□□□□ -1.26
PCF11-205ENST00000530906 RSBN1LQ6PCB5 846 aaPredicted RBP7.17□□□□□ -1.26
PCF11-205ENST00000530906 LYPD8Q6UX82 237 aa7.17□□□□□ -1.26
PCF11-205ENST00000530906 TXNDC2Q86VQ3 553 aa7.17□□□□□ -1.26
PCF11-205ENST00000530906 PARP9Q8IXQ6 854 aa7.17□□□□□ -1.26
PCF11-205ENST00000530906 NUDT16Q96DE0 195 aaKnown RBP7.17□□□□□ -1.26
PCF11-205ENST00000530906 GGNBP2Q9H3C7 697 aa7.17□□□□□ -1.26
PCF11-205ENST00000530906 PCDHB15Q9Y5E8 787 aa7.17□□□□□ -1.26
PCF11-205ENST00000530906 NALCNQ8IZF0 1738 aa7.17□□□□□ -1.26
PCF11-205ENST00000530906 ROBO2Q9HCK4 1378 aa7.17□□□□□ -1.26
PCF11-205ENST00000530906 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.16□□□□□ -1.26
PCF11-205ENST00000530906 MAP2P11137 1827 aaKnown RBP7.16□□□□□ -1.26
PCF11-205ENST00000530906 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
PCF11-205ENST00000530906 LMOD3Q0VAK6 560 aa7.16□□□□□ -1.26
PCF11-205ENST00000530906 WAPLQ7Z5K2 1190 aa7.16□□□□□ -1.26
PCF11-205ENST00000530906 COG3Q96JB2 828 aa7.16□□□□□ -1.26
PCF11-205ENST00000530906 PLEKHF1Q96S99 279 aa7.16□□□□□ -1.26
PCF11-205ENST00000530906 CRBNQ96SW2 442 aa7.16□□□□□ -1.26
PCF11-205ENST00000530906 NXF1Q9UBU9 619 aaKnown RBP7.16□□□□□ -1.26
PCF11-205ENST00000530906 TTC21AQ8NDW8 1320 aa7.16□□□□□ -1.26
PCF11-205ENST00000530906 USP54Q70EL1 1684 aa7.16□□□□□ -1.26
PCF11-205ENST00000530906 CFAP99D6REC4 459 aa7.15□□□□□ -1.26
PCF11-205ENST00000530906 SPTLC1O15269 473 aa7.15□□□□□ -1.26
PCF11-205ENST00000530906 TMPOP42166 694 aaKnown RBP7.15□□□□□ -1.26
PCF11-205ENST00000530906 POLKQ9UBT6 870 aa7.15□□□□□ -1.26
PCF11-205ENST00000530906 KIF24Q5T7B8 1368 aa7.15□□□□□ -1.26
PCF11-205ENST00000530906 USP6P35125 1406 aa7.15□□□□□ -1.27
PCF11-205ENST00000530906 SETD1BQ9UPS6 1966 aaKnown RBP7.15□□□□□ -1.27
PCF11-205ENST00000530906 OVOS2A0A0J9YW53 1432 aa7.14□□□□□ -1.27
PCF11-205ENST00000530906 TRIM66O15016 1216 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms