RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 LRRC69Q6ZNQ3 347 aa13.46□□□□□ -0.25
CSDE1-213ENST00000530784 ALDH16A1Q8IZ83 802 aa13.46□□□□□ -0.25
CSDE1-213ENST00000530784 NGLY1Q96IV0 654 aa13.46□□□□□ -0.25
CSDE1-213ENST00000530784 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.25
CSDE1-213ENST00000530784 ATXN7O15265 892 aaPredicted RBP13.45□□□□□ -0.26
CSDE1-213ENST00000530784 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
CSDE1-213ENST00000530784 SLURP2P0DP57 97 aa13.45□□□□□ -0.26
CSDE1-213ENST00000530784 MX2P20592 715 aa13.45□□□□□ -0.26
CSDE1-213ENST00000530784 SRSF11Q05519 484 aaKnown RBP13.45□□□□□ -0.26
CSDE1-213ENST00000530784 ATXN7L1Q9ULK2 861 aaPredicted RBP13.45□□□□□ -0.26
CSDE1-213ENST00000530784 PRMT3O60678 531 aa13.44□□□□□ -0.26
CSDE1-213ENST00000530784 ARID3AQ99856 593 aa13.43□□□□□ -0.26
CSDE1-213ENST00000530784 NEUROD4Q9HD90 331 aa13.43□□□□□ -0.26
CSDE1-213ENST00000530784 GPC6Q9Y625 555 aaPredicted RBP13.43□□□□□ -0.26
CSDE1-213ENST00000530784 IGF1RP08069 1367 aa13.43□□□□□ -0.26
CSDE1-213ENST00000530784 DCDC2BA2VCK2 349 aa13.42□□□□□ -0.26
CSDE1-213ENST00000530784 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
CSDE1-213ENST00000530784 HCN2Q9UL51 889 aa13.42□□□□□ -0.26
CSDE1-213ENST00000530784 FOXO3O43524 673 aa13.41□□□□□ -0.26
CSDE1-213ENST00000530784 FGFR3P22607 806 aa13.41□□□□□ -0.26
CSDE1-213ENST00000530784 TNP2Q05952 138 aa13.41□□□□□ -0.26
CSDE1-213ENST00000530784 SAMD5Q5TGI4 173 aa13.41□□□□□ -0.26
CSDE1-213ENST00000530784 WHAMMQ8TF30 809 aa13.41□□□□□ -0.26
CSDE1-213ENST00000530784 KHNYNO15037 678 aaKnown RBP13.4□□□□□ -0.26
CSDE1-213ENST00000530784 MAPTP10636 758 aaKnown RBP13.4□□□□□ -0.26
CSDE1-213ENST00000530784 CTBSQ01459 385 aa13.4□□□□□ -0.26
CSDE1-213ENST00000530784 OCLNQ16625 522 aa13.4□□□□□ -0.26
CSDE1-213ENST00000530784 ZNF280CQ8ND82 737 aa13.4□□□□□ -0.26
CSDE1-213ENST00000530784 HSH2DQ96JZ2 352 aa13.4□□□□□ -0.26
CSDE1-213ENST00000530784 SUSD3Q96L08 255 aa13.39□□□□□ -0.27
CSDE1-213ENST00000530784 C2CD2LO14523 706 aa13.38□□□□□ -0.27
CSDE1-213ENST00000530784 FAM157BP0CG42 384 aa13.38□□□□□ -0.27
CSDE1-213ENST00000530784 FKBP5Q13451 457 aaPredicted RBP13.38□□□□□ -0.27
CSDE1-213ENST00000530784 ZNF385CQ66K41 422 aaPredicted RBP13.38□□□□□ -0.27
CSDE1-213ENST00000530784 VTI1AQ96AJ9 217 aa13.38□□□□□ -0.27
CSDE1-213ENST00000530784 STK17AQ9UEE5 414 aa13.38□□□□□ -0.27
CSDE1-213ENST00000530784 NSFL1CQ9UNZ2 370 aaKnown RBP13.38□□□□□ -0.27
CSDE1-213ENST00000530784 RTN1Q16799 776 aa13.37□□□□□ -0.27
CSDE1-213ENST00000530784 SLAIN2Q9P270 581 aa13.37□□□□□ -0.27
CSDE1-213ENST00000530784 ANKIB1Q9P2G1 1089 aa13.37□□□□□ -0.27
CSDE1-213ENST00000530784 CD33P20138 364 aa13.36□□□□□ -0.27
CSDE1-213ENST00000530784 LYPD4Q6UWN0 246 aa13.36□□□□□ -0.27
CSDE1-213ENST00000530784 CLP1Q92989 425 aaKnown RBP13.36□□□□□ -0.27
CSDE1-213ENST00000530784 EFSO43281 561 aa13.35□□□□□ -0.27
CSDE1-213ENST00000530784 BMP4P12644 408 aa13.35□□□□□ -0.27
CSDE1-213ENST00000530784 MAP2K3P46734 347 aa13.35□□□□□ -0.27
CSDE1-213ENST00000530784 ACDQ96AP0 544 aa13.35□□□□□ -0.27
CSDE1-213ENST00000530784 QTRT2Q9H974 415 aaKnown RBP13.35□□□□□ -0.27
CSDE1-213ENST00000530784 STRN4Q9NRL3 753 aa13.35□□□□□ -0.27
CSDE1-213ENST00000530784 SVOPQ8N4V2 548 aa13.34□□□□□ -0.27
CSDE1-213ENST00000530784 CXXC1Q9P0U4 656 aaPredicted RBP13.34□□□□□ -0.27
CSDE1-213ENST00000530784 CELA2BP08218 269 aaPredicted RBP13.33□□□□□ -0.28
CSDE1-213ENST00000530784 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
CSDE1-213ENST00000530784 KLK14Q9P0G3 267 aa13.32□□□□□ -0.28
CSDE1-213ENST00000530784 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
CSDE1-213ENST00000530784 BCS1LQ9Y276 419 aa13.32□□□□□ -0.28
CSDE1-213ENST00000530784 MYO15BQ96JP2 1530 aa13.31□□□□□ -0.28
CSDE1-213ENST00000530784 TMEM88BA6NKF7 163 aa13.31□□□□□ -0.28
CSDE1-213ENST00000530784 SFSWAPQ12872 951 aaKnown RBP13.31□□□□□ -0.28
CSDE1-213ENST00000530784 LAMC2Q13753 1193 aa13.31□□□□□ -0.28
CSDE1-213ENST00000530784 CAPN12Q6ZSI9 719 aa13.31□□□□□ -0.28
CSDE1-213ENST00000530784 OXCT2Q9BYC2 517 aaPredicted RBP13.31□□□□□ -0.28
CSDE1-213ENST00000530784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSDE1-213ENST00000530784 FAM181BA6NEQ2 426 aa13.3□□□□□ -0.28
CSDE1-213ENST00000530784 TYRO3Q06418 890 aa13.3□□□□□ -0.28
CSDE1-213ENST00000530784 DGKZQ13574 1117 aa13.3□□□□□ -0.28
CSDE1-213ENST00000530784 HIF1AQ16665 826 aa13.3□□□□□ -0.28
CSDE1-213ENST00000530784 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
CSDE1-213ENST00000530784 MKNK1Q9BUB5 465 aa13.3□□□□□ -0.28
CSDE1-213ENST00000530784 ATP2B4P23634 1241 aa13.29□□□□□ -0.28
CSDE1-213ENST00000530784 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
CSDE1-213ENST00000530784 BTLAQ7Z6A9 289 aa13.29□□□□□ -0.28
CSDE1-213ENST00000530784 MYO19Q96H55 970 aa13.29□□□□□ -0.28
CSDE1-213ENST00000530784 BRD7Q9NPI1 651 aa13.29□□□□□ -0.28
CSDE1-213ENST00000530784 CARNS1A5YM72 827 aa13.28□□□□□ -0.28
CSDE1-213ENST00000530784 ARHGEF15O94989 841 aa13.28□□□□□ -0.28
CSDE1-213ENST00000530784 BCRP11274 1271 aa13.28□□□□□ -0.28
CSDE1-213ENST00000530784 LRFN2Q9ULH4 789 aa13.28□□□□□ -0.28
CSDE1-213ENST00000530784 TGFBR3LH3BV60 316 aa13.27□□□□□ -0.29
CSDE1-213ENST00000530784 COX20Q5RI15 118 aa13.27□□□□□ -0.29
CSDE1-213ENST00000530784 MAP3K10Q02779 954 aa13.26□□□□□ -0.29
CSDE1-213ENST00000530784 C11orf91Q3C1V1 193 aa13.26□□□□□ -0.29
CSDE1-213ENST00000530784 IER5Q5VY09 327 aa13.26□□□□□ -0.29
CSDE1-213ENST00000530784 SAP130Q9H0E3 1048 aa13.26□□□□□ -0.29
CSDE1-213ENST00000530784 DMGDHQ9UI17 866 aaKnown RBP13.26□□□□□ -0.29
CSDE1-213ENST00000530784 NAA30Q147X3 362 aaPredicted RBP13.25□□□□□ -0.29
CSDE1-213ENST00000530784 C1orf229Q6ZS94 237 aaPredicted RBP13.25□□□□□ -0.29
CSDE1-213ENST00000530784 COL26A1Q96A83 441 aa13.25□□□□□ -0.29
CSDE1-213ENST00000530784 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
CSDE1-213ENST00000530784 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
CSDE1-213ENST00000530784 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
CSDE1-213ENST00000530784 ARAFP10398 606 aa13.24□□□□□ -0.29
CSDE1-213ENST00000530784 GDF2Q9UK05 429 aaPredicted RBP13.24□□□□□ -0.29
CSDE1-213ENST00000530784 PRR12Q9ULL5 1215 aa13.24□□□□□ -0.29
CSDE1-213ENST00000530784 OIP5O43482 229 aa13.23□□□□□ -0.29
CSDE1-213ENST00000530784 KCNQ4P56696 695 aa13.23□□□□□ -0.29
CSDE1-213ENST00000530784 GOLGA6L1Q8N7Z2 621 aa13.23□□□□□ -0.29
CSDE1-213ENST00000530784 SLC30A3Q99726 388 aa13.23□□□□□ -0.29
CSDE1-213ENST00000530784 KLF15Q9UIH9 416 aa13.23□□□□□ -0.29
CSDE1-213ENST00000530784 KCNH4Q9UQ05 1017 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms