RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 BCL2L12Q9HB09 334 aa20.6■□□□□ 0.89
BRK1-201ENST00000530758 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
BRK1-201ENST00000530758 BRPF1P55201 1214 aaPredicted RBP20.59■□□□□ 0.89
BRK1-201ENST00000530758 TTLL7Q6ZT98 887 aa20.59■□□□□ 0.89
BRK1-201ENST00000530758 NLGN1Q8N2Q7 840 aa20.59■□□□□ 0.89
BRK1-201ENST00000530758 ARXQ96QS3 562 aa20.59■□□□□ 0.89
BRK1-201ENST00000530758 MAP3K15Q6ZN16 1313 aa20.58■□□□□ 0.89
BRK1-201ENST00000530758 MSH5O43196 834 aa20.58■□□□□ 0.89
BRK1-201ENST00000530758 USPL1Q5W0Q7 1092 aa20.58■□□□□ 0.89
BRK1-201ENST00000530758 XAGE3Q8WTP9 111 aa20.58■□□□□ 0.89
BRK1-201ENST00000530758 YTHDC1Q96MU7 727 aaKnown RBP20.58■□□□□ 0.89
BRK1-201ENST00000530758 SYT17Q9BSW7 474 aa20.58■□□□□ 0.89
BRK1-201ENST00000530758 PHAXQ9H814 394 aaKnown RBP20.58■□□□□ 0.89
BRK1-201ENST00000530758 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
BRK1-201ENST00000530758 ZNF330Q9Y3S2 320 aaPredicted RBP20.58■□□□□ 0.89
BRK1-201ENST00000530758 TM4SF1P30408 202 aa20.56■□□□□ 0.88
BRK1-201ENST00000530758 KIF6Q6ZMV9 814 aa20.56■□□□□ 0.88
BRK1-201ENST00000530758 MRPL50Q8N5N7 158 aaKnown RBP20.56■□□□□ 0.88
BRK1-201ENST00000530758 SSH1Q8WYL5 1049 aa20.56■□□□□ 0.88
BRK1-201ENST00000530758 TCERG1O14776 1098 aaKnown RBP20.55■□□□□ 0.88
BRK1-201ENST00000530758 RARSP54136 660 aaKnown RBP20.55■□□□□ 0.88
BRK1-201ENST00000530758 FKBP8Q14318 412 aa20.55■□□□□ 0.88
BRK1-201ENST00000530758 GIGYF2Q6Y7W6 1299 aaKnown RBP20.55■□□□□ 0.88
BRK1-201ENST00000530758 ANKRD13DQ6ZTN6 518 aa20.55■□□□□ 0.88
BRK1-201ENST00000530758 G2E3Q7L622 706 aa20.55■□□□□ 0.88
BRK1-201ENST00000530758 PLBD2Q8NHP8 589 aa20.55■□□□□ 0.88
BRK1-201ENST00000530758 AIMP1Q12904 312 aaKnown RBP20.54■□□□□ 0.88
BRK1-201ENST00000530758 HLFQ16534 295 aa20.54■□□□□ 0.88
BRK1-201ENST00000530758 MSL1Q68DK7 614 aa20.54■□□□□ 0.88
BRK1-201ENST00000530758 FLIIQ13045 1269 aa20.53■□□□□ 0.88
BRK1-201ENST00000530758 ZNF652Q9Y2D9 606 aa20.53■□□□□ 0.88
BRK1-201ENST00000530758 ARFGEF2Q9Y6D5 1785 aa20.52■□□□□ 0.88
BRK1-201ENST00000530758 DDX58O95786 925 aaKnown RBP20.52■□□□□ 0.88
BRK1-201ENST00000530758 KSR2Q6VAB6 950 aa20.52■□□□□ 0.88
BRK1-201ENST00000530758 ANKRD36CQ5JPF3 1778 aa20.51■□□□□ 0.87
BRK1-201ENST00000530758 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
BRK1-201ENST00000530758 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
BRK1-201ENST00000530758 POLD1P28340 1107 aa20.5■□□□□ 0.87
BRK1-201ENST00000530758 TCIRG1Q13488 830 aa20.5■□□□□ 0.87
BRK1-201ENST00000530758 NFIXQ14938 502 aa20.5■□□□□ 0.87
BRK1-201ENST00000530758 HSP90AB3PQ58FF7 597 aa20.5■□□□□ 0.87
BRK1-201ENST00000530758 TBC1D9BQ66K14 1250 aa20.5■□□□□ 0.87
BRK1-201ENST00000530758 ZNF34Q8IZ26 560 aa20.5■□□□□ 0.87
BRK1-201ENST00000530758 PTPRCP08575 1304 aa20.5■□□□□ 0.87
BRK1-201ENST00000530758 NRXN2Q9P2S2 1712 aa20.5■□□□□ 0.87
BRK1-201ENST00000530758 TRIM28Q13263 835 aaKnown RBP20.49■□□□□ 0.87
BRK1-201ENST00000530758 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
BRK1-201ENST00000530758 ADCY9O60503 1353 aa20.48■□□□□ 0.87
BRK1-201ENST00000530758 PI4KAP2A4QPH2 592 aa20.48■□□□□ 0.87
BRK1-201ENST00000530758 RIC3Q7Z5B4 369 aa20.48■□□□□ 0.87
BRK1-201ENST00000530758 PI4KAP1Q8N8J0 262 aa20.48■□□□□ 0.87
BRK1-201ENST00000530758 AFDNP55196 1824 aaKnown RBP20.48■□□□□ 0.87
BRK1-201ENST00000530758 UTRNP46939 3433 aa20.47■□□□□ 0.87
BRK1-201ENST00000530758 POLRMTO00411 1230 aaKnown RBP20.47■□□□□ 0.87
BRK1-201ENST00000530758 MMP10P09238 476 aa20.47■□□□□ 0.87
BRK1-201ENST00000530758 DDR1Q08345 913 aa20.47■□□□□ 0.87
BRK1-201ENST00000530758 FKBP5Q13451 457 aaPredicted RBP20.47■□□□□ 0.87
BRK1-201ENST00000530758 NLGN2Q8NFZ4 835 aa20.47■□□□□ 0.87
BRK1-201ENST00000530758 ARHGAP45Q92619 1136 aa20.47■□□□□ 0.87
BRK1-201ENST00000530758 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
BRK1-201ENST00000530758 ISCA1Q9BUE6 129 aa20.47■□□□□ 0.87
BRK1-201ENST00000530758 METTL22Q9BUU2 404 aaPredicted RBP20.47■□□□□ 0.87
BRK1-201ENST00000530758 BCL2L13Q9BXK5 485 aa20.46■□□□□ 0.87
BRK1-201ENST00000530758 MAP3K2Q9Y2U5 619 aa20.46■□□□□ 0.87
BRK1-201ENST00000530758 BCAR3O75815 825 aa20.45■□□□□ 0.86
BRK1-201ENST00000530758 PARP10Q53GL7 1025 aa20.45■□□□□ 0.86
BRK1-201ENST00000530758 NIP7Q9Y221 180 aaKnown RBP eCLIP20.45■□□□□ 0.86
BRK1-201ENST00000530758 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.86
BRK1-201ENST00000530758 SERPINB2P05120 415 aa20.44■□□□□ 0.86
BRK1-201ENST00000530758 DNAAF4Q8WXU2 420 aa20.44■□□□□ 0.86
BRK1-201ENST00000530758 NOB1Q9ULX3 412 aaKnown RBP20.44■□□□□ 0.86
BRK1-201ENST00000530758 PARP3Q9Y6F1 533 aa20.44■□□□□ 0.86
BRK1-201ENST00000530758 KIF16BQ96L93 1317 aa20.44■□□□□ 0.86
BRK1-201ENST00000530758 IBTKQ9P2D0 1353 aaPredicted RBP20.44■□□□□ 0.86
BRK1-201ENST00000530758 KIF13BQ9NQT8 1826 aa20.43■□□□□ 0.86
BRK1-201ENST00000530758 KLHL34Q8N239 644 aa20.43■□□□□ 0.86
BRK1-201ENST00000530758 RCAN3Q9UKA8 241 aa20.43■□□□□ 0.86
BRK1-201ENST00000530758 UBN2Q6ZU65 1347 aa20.43■□□□□ 0.86
BRK1-201ENST00000530758 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
BRK1-201ENST00000530758 NLRP10Q86W26 655 aa20.42■□□□□ 0.86
BRK1-201ENST00000530758 IPO8O15397 1037 aaKnown RBP20.41■□□□□ 0.86
BRK1-201ENST00000530758 IGKV5-2P06315 115 aa20.41■□□□□ 0.86
BRK1-201ENST00000530758 TPTE2Q6XPS3 522 aa20.41■□□□□ 0.86
BRK1-201ENST00000530758 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
BRK1-201ENST00000530758 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
BRK1-201ENST00000530758 F6X3S4 739 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 GPTP24298 496 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 BEND3Q5T5X7 828 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 SUSD4Q5VX71 490 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 LINS1Q8NG48 757 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 MYD88Q99836 296 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 API5Q9BZZ5 524 aaKnown RBP20.4■□□□□ 0.86
BRK1-201ENST00000530758 NYXQ9GZU5 481 aa20.4■□□□□ 0.86
BRK1-201ENST00000530758 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.86
BRK1-201ENST00000530758 PXDNLA1KZ92 1463 aa20.39■□□□□ 0.85
BRK1-201ENST00000530758 KIAA1551Q9HCM1 1747 aa20.39■□□□□ 0.85
BRK1-201ENST00000530758 NEURL1BA8MQ27 555 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms