RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 TEFQ10587 303 aa11.68□□□□□ -0.54
USP35-205ENST00000530521 EAPPQ56P03 285 aaPredicted RBP11.68□□□□□ -0.54
USP35-205ENST00000530521 CLEC11AQ9Y240 323 aa11.68□□□□□ -0.54
USP35-205ENST00000530521 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
USP35-205ENST00000530521 SIPA1L3O60292 1781 aaPredicted RBP11.67□□□□□ -0.54
USP35-205ENST00000530521 ITGBL1O95965 494 aaPredicted RBP11.67□□□□□ -0.54
USP35-205ENST00000530521 KCNA4P22459 653 aa11.67□□□□□ -0.54
USP35-205ENST00000530521 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
USP35-205ENST00000530521 STYK1Q6J9G0 422 aa11.67□□□□□ -0.54
USP35-205ENST00000530521 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
USP35-205ENST00000530521 CNKSR1Q969H4 720 aa11.67□□□□□ -0.54
USP35-205ENST00000530521 MASTLQ96GX5 879 aa11.67□□□□□ -0.54
USP35-205ENST00000530521 TAF1DQ9H5J8 278 aaPredicted RBP11.67□□□□□ -0.54
USP35-205ENST00000530521 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
USP35-205ENST00000530521 PASKQ96RG2 1323 aa11.66□□□□□ -0.54
USP35-205ENST00000530521 ZNF541Q9H0D2 1346 aa11.66□□□□□ -0.54
USP35-205ENST00000530521 SCN4AP35499 1836 aa11.66□□□□□ -0.54
USP35-205ENST00000530521 GNAT3A8MTJ3 354 aa11.66□□□□□ -0.54
USP35-205ENST00000530521 LBX1P52954 281 aa11.66□□□□□ -0.54
USP35-205ENST00000530521 DZIP3Q86Y13 1208 aaKnown RBP11.66□□□□□ -0.54
USP35-205ENST00000530521 C7orf43Q8WVR3 580 aa11.66□□□□□ -0.54
USP35-205ENST00000530521 PHACTR3Q96KR7 559 aa11.66□□□□□ -0.54
USP35-205ENST00000530521 CNTNAP1P78357 1384 aa11.66□□□□□ -0.54
USP35-205ENST00000530521 SCN7AQ01118 1682 aa11.65□□□□□ -0.54
USP35-205ENST00000530521 LTBP3Q9NS15 1303 aa11.65□□□□□ -0.54
USP35-205ENST00000530521 ARFGEF2Q9Y6D5 1785 aa11.65□□□□□ -0.54
USP35-205ENST00000530521 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
USP35-205ENST00000530521 ST5P78524 1137 aa11.65□□□□□ -0.54
USP35-205ENST00000530521 FMR1Q06787 632 aaKnown RBP eCLIP11.65□□□□□ -0.54
USP35-205ENST00000530521 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
USP35-205ENST00000530521 MAP1SQ66K74 1059 aaPredicted RBP11.65□□□□□ -0.54
USP35-205ENST00000530521 NPM2Q86SE8 214 aaKnown RBP11.65□□□□□ -0.54
USP35-205ENST00000530521 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
USP35-205ENST00000530521 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.54
USP35-205ENST00000530521 PDZRN3Q9UPQ7 1066 aa11.65□□□□□ -0.54
USP35-205ENST00000530521 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
USP35-205ENST00000530521 PER1O15534 1290 aaPredicted RBP11.64□□□□□ -0.55
USP35-205ENST00000530521 NBPF5PQ86XG9 351 aaPredicted RBP11.64□□□□□ -0.55
USP35-205ENST00000530521 FMNL2Q96PY5 1086 aa11.64□□□□□ -0.55
USP35-205ENST00000530521 IQCA1LA6NCM1 817 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
USP35-205ENST00000530521 EPHX2P34913 555 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 CTCFP49711 727 aaPredicted RBP11.63□□□□□ -0.55
USP35-205ENST00000530521 DEFB115Q30KQ5 88 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 SLC51AQ86UW1 340 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 CNTROBQ8N137 903 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 PRDM10Q9NQV6 1147 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 BCORQ6W2J9 1755 aa11.63□□□□□ -0.55
USP35-205ENST00000530521 RNF123Q5XPI4 1314 aa11.62□□□□□ -0.55
USP35-205ENST00000530521 HLFQ16534 295 aa11.62□□□□□ -0.55
USP35-205ENST00000530521 CCDC93Q567U6 631 aa11.62□□□□□ -0.55
USP35-205ENST00000530521 SYNE4Q8N205 404 aa11.62□□□□□ -0.55
USP35-205ENST00000530521 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
USP35-205ENST00000530521 HACL1Q9UJ83 578 aa11.62□□□□□ -0.55
USP35-205ENST00000530521 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
USP35-205ENST00000530521 NPR1P16066 1061 aa11.61□□□□□ -0.55
USP35-205ENST00000530521 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
USP35-205ENST00000530521 GRM1Q13255 1194 aa11.61□□□□□ -0.55
USP35-205ENST00000530521 DCTN1Q14203 1278 aa11.61□□□□□ -0.55
USP35-205ENST00000530521 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
USP35-205ENST00000530521 MCM10Q7L590 875 aa11.61□□□□□ -0.55
USP35-205ENST00000530521 NGEFQ8N5V2 710 aa11.61□□□□□ -0.55
USP35-205ENST00000530521 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
USP35-205ENST00000530521 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
USP35-205ENST00000530521 NIP7Q9Y221 180 aaKnown RBP eCLIP11.61□□□□□ -0.55
USP35-205ENST00000530521 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
USP35-205ENST00000530521 TCERG1O14776 1098 aaKnown RBP11.6□□□□□ -0.55
USP35-205ENST00000530521 HSPA8P11142 646 aaKnown RBP11.6□□□□□ -0.55
USP35-205ENST00000530521 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
USP35-205ENST00000530521 TPTE2Q6XPS3 522 aa11.6□□□□□ -0.55
USP35-205ENST00000530521 MIER1Q8N108 512 aa11.6□□□□□ -0.55
USP35-205ENST00000530521 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
USP35-205ENST00000530521 ABT1Q9ULW3 272 aaKnown RBP11.6□□□□□ -0.55
USP35-205ENST00000530521 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
USP35-205ENST00000530521 ADAMTSL1Q8N6G6 1762 aa11.59□□□□□ -0.55
USP35-205ENST00000530521 KLRG2A4D1S0 409 aaPredicted RBP11.59□□□□□ -0.55
USP35-205ENST00000530521 FZD9O00144 591 aa11.59□□□□□ -0.55
USP35-205ENST00000530521 PRKAR2BP31323 418 aa11.59□□□□□ -0.55
USP35-205ENST00000530521 IARSP41252 1262 aaKnown RBP11.59□□□□□ -0.55
USP35-205ENST00000530521 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
USP35-205ENST00000530521 ABHD8Q96I13 439 aa11.59□□□□□ -0.55
USP35-205ENST00000530521 NUP98P52948 1817 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 COL3A1P02461 1466 aaPredicted RBP11.58□□□□□ -0.56
USP35-205ENST00000530521 LTBP1Q14766 1721 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 CEMIPQ8WUJ3 1361 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 ANP32CO43423 234 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 SNRPA1P09661 255 aaKnown RBP11.58□□□□□ -0.56
USP35-205ENST00000530521 GTF2E1P29083 439 aaPredicted RBP11.58□□□□□ -0.56
USP35-205ENST00000530521 EPS15P42566 896 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 CLEC4GQ6UXB4 293 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
USP35-205ENST00000530521 RTKN2Q8IZC4 609 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 CASP8AP2Q9UKL3 1982 aa11.58□□□□□ -0.56
USP35-205ENST00000530521 COL4A5P29400 1685 aa11.57□□□□□ -0.56
USP35-205ENST00000530521 RASSF10A6NK89 507 aa11.57□□□□□ -0.56
USP35-205ENST00000530521 CCDC85CA6NKD9 419 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms