RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 GATA4P43694 442 aa6.5□□□□□ -1.37
NUP98-218ENST00000530516 PCBP4P57723 403 aaKnown RBP6.5□□□□□ -1.37
NUP98-218ENST00000530516 C1orf53Q5VUE5 145 aa6.5□□□□□ -1.37
NUP98-218ENST00000530516 PROSER2Q86WR7 435 aaPredicted RBP6.5□□□□□ -1.37
NUP98-218ENST00000530516 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
NUP98-218ENST00000530516 PLVAPQ9BX97 442 aa6.5□□□□□ -1.37
NUP98-218ENST00000530516 ANKIB1Q9P2G1 1089 aa6.5□□□□□ -1.37
NUP98-218ENST00000530516 SERTM1A2A2V5 107 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 A6NJR5 290 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 NCOA4Q13772 614 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 HIF1AQ16665 826 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 SYT9Q86SS6 491 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 Q8N3U1 123 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 TNFRSF25Q93038 417 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 TRIM11Q96F44 468 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 UCN2Q96RP3 112 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 MDFIQ99750 246 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 EFCC1Q9HA90 598 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 ZNF232Q9UNY5 417 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 USP3Q9Y6I4 520 aa6.49□□□□□ -1.37
NUP98-218ENST00000530516 M0R2N6 131 aa6.48□□□□□ -1.37
NUP98-218ENST00000530516 APBA3O96018 575 aa6.48□□□□□ -1.37
NUP98-218ENST00000530516 TXLNAP40222 546 aa6.48□□□□□ -1.37
NUP98-218ENST00000530516 HIRAP54198 1017 aaPredicted RBP6.48□□□□□ -1.37
NUP98-218ENST00000530516 EPHA4P54764 986 aa6.48□□□□□ -1.37
NUP98-218ENST00000530516 PSMA6P60900 246 aaKnown RBP6.48□□□□□ -1.37
NUP98-218ENST00000530516 SLC9A9Q8IVB4 645 aa6.48□□□□□ -1.37
NUP98-218ENST00000530516 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
NUP98-218ENST00000530516 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
NUP98-218ENST00000530516 HCN2Q9UL51 889 aa6.48□□□□□ -1.37
NUP98-218ENST00000530516 USP17L5A8MUK1 530 aa6.47□□□□□ -1.37
NUP98-218ENST00000530516 HDGFL1Q5TGJ6 251 aa6.47□□□□□ -1.37
NUP98-218ENST00000530516 LRRC69Q6ZNQ3 347 aa6.47□□□□□ -1.37
NUP98-218ENST00000530516 RHPN1Q8TCX5 695 aa6.47□□□□□ -1.37
NUP98-218ENST00000530516 ZDHHC1Q8WTX9 485 aa6.47□□□□□ -1.37
NUP98-218ENST00000530516 STRN4Q9NRL3 753 aa6.47□□□□□ -1.37
NUP98-218ENST00000530516 PARP3Q9Y6F1 533 aa6.47□□□□□ -1.37
NUP98-218ENST00000530516 KCNQ4P56696 695 aa6.46□□□□□ -1.38
NUP98-218ENST00000530516 POTEAQ6S8J7 498 aa6.46□□□□□ -1.38
NUP98-218ENST00000530516 LARGE2Q8N3Y3 721 aa6.45□□□□□ -1.38
NUP98-218ENST00000530516 GLMNQ92990 594 aa6.45□□□□□ -1.38
NUP98-218ENST00000530516 RBM19Q9Y4C8 960 aaKnown RBP6.45□□□□□ -1.38
NUP98-218ENST00000530516 PALM3A6NDB9 673 aaPredicted RBP6.44□□□□□ -1.38
NUP98-218ENST00000530516 M0R082 166 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 SPEM2Q0P670 501 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 TRIM28Q13263 835 aaKnown RBP6.44□□□□□ -1.38
NUP98-218ENST00000530516 DOC2BQ14184 412 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 CCDC102BQ68D86 513 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 TPCN2Q8NHX9 752 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 GAS2L2Q8NHY3 880 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 ZNF417Q8TAU3 575 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 C7orf43Q8WVR3 580 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 ZNF587Q96SQ5 575 aaPredicted RBP6.44□□□□□ -1.38
NUP98-218ENST00000530516 SEMA6BQ9H3T3 888 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 BRD7Q9NPI1 651 aa6.44□□□□□ -1.38
NUP98-218ENST00000530516 ADH7P40394 386 aa6.43□□□□□ -1.38
NUP98-218ENST00000530516 TNS4Q8IZW8 715 aa6.43□□□□□ -1.38
NUP98-218ENST00000530516 STAG2Q8N3U4 1231 aa6.43□□□□□ -1.38
NUP98-218ENST00000530516 KCNH4Q9UQ05 1017 aa6.43□□□□□ -1.38
NUP98-218ENST00000530516 GTF3C3Q9Y5Q9 886 aa6.43□□□□□ -1.38
NUP98-218ENST00000530516 USP17L3A6NCW0 530 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 USP17L4A6NCW7 530 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 ATP9BO43861 1147 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 SFSWAPQ12872 951 aaKnown RBP6.42□□□□□ -1.38
NUP98-218ENST00000530516 USP17L2Q6R6M4 530 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 USP17L1Q7RTZ2 530 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 SIX5Q8N196 739 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 DEPDC4Q8N2C3 294 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 MICALL1Q8N3F8 863 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 CEP63Q96MT8 703 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
NUP98-218ENST00000530516 C9orf172C9J069 976 aa6.41□□□□□ -1.38
NUP98-218ENST00000530516 LILRB5O75023 590 aa6.41□□□□□ -1.38
NUP98-218ENST00000530516 ZMYM1Q5SVZ6 1142 aa6.41□□□□□ -1.38
NUP98-218ENST00000530516 SLC30A3Q99726 388 aa6.41□□□□□ -1.38
NUP98-218ENST00000530516 PHACTR1Q9C0D0 580 aa6.41□□□□□ -1.38
NUP98-218ENST00000530516 ZBTB7BO15156 539 aaPredicted RBP6.4□□□□□ -1.38
NUP98-218ENST00000530516 NID1P14543 1247 aa6.4□□□□□ -1.38
NUP98-218ENST00000530516 TYRO3Q06418 890 aa6.4□□□□□ -1.38
NUP98-218ENST00000530516 TSPAN10Q9H1Z9 355 aaPredicted RBP6.4□□□□□ -1.38
NUP98-218ENST00000530516 SFI1A8K8P3 1242 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 PPP1R12BO60237 982 aaPredicted RBP6.39□□□□□ -1.39
NUP98-218ENST00000530516 ALBP02768 609 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 NRG1Q02297 640 aaPredicted RBP6.39□□□□□ -1.39
NUP98-218ENST00000530516 COL9A3Q14050 684 aaPredicted RBP6.39□□□□□ -1.39
NUP98-218ENST00000530516 PCSK7Q16549 785 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 RSPO4Q2I0M5 234 aaPredicted RBP6.39□□□□□ -1.39
NUP98-218ENST00000530516 NKAPLQ5M9Q1 402 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 TBCELQ5QJ74 424 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 IER5Q5VY09 327 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 OGFOD1Q8N543 542 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 SUSD3Q96L08 255 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 ZNF777Q9ULD5 760 aaPredicted RBP6.39□□□□□ -1.39
NUP98-218ENST00000530516 STARD13Q9Y3M8 1113 aa6.39□□□□□ -1.39
NUP98-218ENST00000530516 ELNP15502 786 aa6.38□□□□□ -1.39
NUP98-218ENST00000530516 RAC1P63000 192 aa6.38□□□□□ -1.39
NUP98-218ENST00000530516 CLDN10P78369 228 aa6.38□□□□□ -1.39
NUP98-218ENST00000530516 C20orf204Q6ZNR8 217 aa6.38□□□□□ -1.39
NUP98-218ENST00000530516 CALR3Q96L12 384 aaKnown RBP6.38□□□□□ -1.39
NUP98-218ENST00000530516 TPSG1Q9NRR2 321 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms