RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 LIMCH1Q9UPQ0 1083 aa9.85□□□□□ -0.83
CTNND1-221ENST00000529873 FLIIQ13045 1269 aa9.85□□□□□ -0.83
CTNND1-221ENST00000529873 RBM28Q9NW13 759 aaKnown RBP9.85□□□□□ -0.83
CTNND1-221ENST00000529873 NLRP5P59047 1200 aa9.84□□□□□ -0.83
CTNND1-221ENST00000529873 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
CTNND1-221ENST00000529873 BAG4O95429 457 aaKnown RBP9.84□□□□□ -0.83
CTNND1-221ENST00000529873 CENPHQ9H3R5 247 aa9.84□□□□□ -0.83
CTNND1-221ENST00000529873 C20orf194Q5TEA3 1177 aa9.84□□□□□ -0.83
CTNND1-221ENST00000529873 CCDC150Q8NCX0 1101 aa9.84□□□□□ -0.83
CTNND1-221ENST00000529873 CCDC12Q8WUD4 166 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-221ENST00000529873 EXOC5O00471 708 aa9.84□□□□□ -0.83
CTNND1-221ENST00000529873 IFIT3O14879 490 aaKnown RBP9.84□□□□□ -0.83
CTNND1-221ENST00000529873 KIF20AO95235 890 aa9.84□□□□□ -0.83
CTNND1-221ENST00000529873 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-221ENST00000529873 DNAJC5BQ9UF47 199 aa9.84□□□□□ -0.83
CTNND1-221ENST00000529873 CETN2P41208 172 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 FILIP1Q7Z7B0 1213 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 GBP3Q9H0R5 595 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 UGGT2Q9NYU1 1516 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 TNRQ92752 1358 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 TRIM27P14373 513 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 MCM3P25205 808 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 GJB2P29033 226 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 PPP1R42Q7Z4L9 355 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 MPNDQ8N594 471 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 TAX1BP1Q86VP1 789 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 CDC5LQ99459 802 aaKnown RBP9.83□□□□□ -0.84
CTNND1-221ENST00000529873 PYM1Q9BRP8 204 aaKnown RBP9.83□□□□□ -0.84
CTNND1-221ENST00000529873 KIF5CO60282 957 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 GSTO1P78417 241 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 SPTY2D1Q68D10 685 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-221ENST00000529873 IPO4Q8TEX9 1081 aaKnown RBP9.83□□□□□ -0.84
CTNND1-221ENST00000529873 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 HMG20BQ9P0W2 317 aa9.83□□□□□ -0.84
CTNND1-221ENST00000529873 CCDC194A0A1B0GVG4 234 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 TOP1P11387 765 aaKnown RBP9.82□□□□□ -0.84
CTNND1-221ENST00000529873 TTC22Q5TAA0 569 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 CACNA2D4Q7Z3S7 1137 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 SCLT1Q96NL6 688 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 CLIP2Q9UDT6 1046 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 TEX14Q8IWB6 1497 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 NUP160Q12769 1436 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 VPS36Q86VN1 386 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 CCDC102AQ96A19 550 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 PPIP5K1Q6PFW1 1433 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 SFPQP23246 707 aaKnown RBP eCLIP9.82□□□□□ -0.841e-8■■■□□ 15.1
CTNND1-221ENST00000529873 KIF5BP33176 963 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 ST5P78524 1137 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 PDCL2Q8N4E4 241 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 C11orf95C9JLR9 678 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-221ENST00000529873 ADAMTS2O95450 1211 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 GUCY1B3Q02153 619 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 STX1AQ16623 288 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 ECHDC1Q9NTX5 307 aa9.82□□□□□ -0.84
CTNND1-221ENST00000529873 AMPD3Q01432 767 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 UBA5Q9GZZ9 404 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 KAT14Q9H8E8 782 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 DDX19AQ9NUU7 478 aaKnown RBP9.81□□□□□ -0.84
CTNND1-221ENST00000529873 ACEP12821 1306 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 GOLIM4O00461 696 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 PDE4BQ07343 736 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 CALML4Q96GE6 196 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 YEATS4O95619 227 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 UQCRFS1P1P0C7P4 283 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 PTPN14Q15678 1187 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 MAP9Q49MG5 647 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 TMEM67Q5HYA8 995 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 FAM114A1Q8IWE2 563 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 NUP88Q99567 741 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-221ENST00000529873 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 SNRPA1P09661 255 aaKnown RBP9.81□□□□□ -0.84
CTNND1-221ENST00000529873 NF2P35240 595 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 IDI1Q13907 227 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 KLHL10Q6JEL2 608 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 NCOA7Q8NI08 942 aa9.81□□□□□ -0.84
CTNND1-221ENST00000529873 BAG3O95817 575 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 LDHCP07864 332 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 SSFA2P28290 1259 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 CCT2P78371 535 aaKnown RBP9.8□□□□□ -0.84
CTNND1-221ENST00000529873 CCDC178Q5BJE1 867 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
CTNND1-221ENST00000529873 CCDC91Q7Z6B0 441 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 GPTP24298 496 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 ZSCAN30Q86W11 494 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 SPATA24Q86W54 205 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 GPATCH11Q8N954 259 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 GPATCH8Q9UKJ3 1502 aaKnown RBP9.8□□□□□ -0.84
CTNND1-221ENST00000529873 MFSD6Q6ZSS7 791 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 FSIP1Q8NA03 581 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 SYCP2Q9BX26 1530 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 NEMFO60524 1076 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 USO1O60763 962 aaKnown RBP9.8□□□□□ -0.84
CTNND1-221ENST00000529873 METAP2P50579 478 aaKnown RBP eCLIP9.8□□□□□ -0.84
CTNND1-221ENST00000529873 CCDC152Q4G0S7 254 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms