RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 CDCA8Q53HL2 280 aa4.86□□□□□ -1.63
PTPRC-213ENST00000529828 C1orf141Q5JVX7 400 aa4.86□□□□□ -1.63
PTPRC-213ENST00000529828 TRPC6Q9Y210 931 aa4.86□□□□□ -1.63
PTPRC-213ENST00000529828 SOS1Q07889 1333 aaPredicted RBP4.85□□□□□ -1.63
PTPRC-213ENST00000529828 ZNF831Q5JPB2 1677 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 FOXN1O15353 648 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 SERPINB2P05120 415 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 TTLL6Q8N841 843 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 BCL2L12Q9HB09 334 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 ZBTB1Q9Y2K1 713 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 COL15A1P39059 1388 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 ADAMTS7Q9UKP4 1686 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 C21orf2O43822 256 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 SULT6B1Q6IMI4 303 aa4.85□□□□□ -1.63
PTPRC-213ENST00000529828 ZNF622Q969S3 477 aaKnown RBP eCLIP4.85□□□□□ -1.637e-6■■□□□ 12.8
PTPRC-213ENST00000529828 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.85□□□□□ -1.63
PTPRC-213ENST00000529828 ZC3H4Q9UPT8 1303 aaKnown RBP4.84□□□□□ -1.63
PTPRC-213ENST00000529828 CYP19A1P11511 503 aaPredicted RBP4.84□□□□□ -1.63
PTPRC-213ENST00000529828 CANXP27824 592 aaKnown RBP4.84□□□□□ -1.63
PTPRC-213ENST00000529828 ERFEQ4G0M1 354 aa4.84□□□□□ -1.63
PTPRC-213ENST00000529828 AMOTQ4VCS5 1084 aa4.84□□□□□ -1.63
PTPRC-213ENST00000529828 LGR6Q9HBX8 967 aa4.84□□□□□ -1.63
PTPRC-213ENST00000529828 ZNF330Q9Y3S2 320 aaPredicted RBP4.84□□□□□ -1.63
PTPRC-213ENST00000529828 AFDNP55196 1824 aaKnown RBP4.84□□□□□ -1.63
PTPRC-213ENST00000529828 H0YIN7 160 aa4.84□□□□□ -1.64
PTPRC-213ENST00000529828 DDNO94850 711 aaPredicted RBP4.84□□□□□ -1.64
PTPRC-213ENST00000529828 NARFQ9UHQ1 456 aa4.84□□□□□ -1.64
PTPRC-213ENST00000529828 DPY19L2Q6NUT2 758 aa4.83□□□□□ -1.64
PTPRC-213ENST00000529828 SLC52A2Q9HAB3 445 aa4.83□□□□□ -1.64
PTPRC-213ENST00000529828 COL11A2P13942 1736 aaPredicted RBP4.83□□□□□ -1.64
PTPRC-213ENST00000529828 HMOX1P09601 288 aa4.83□□□□□ -1.64
PTPRC-213ENST00000529828 VEGFBP49765 207 aa4.83□□□□□ -1.64
PTPRC-213ENST00000529828 EAPPQ56P03 285 aaPredicted RBP4.83□□□□□ -1.64
PTPRC-213ENST00000529828 TBC1D9BQ66K14 1250 aa4.83□□□□□ -1.64
PTPRC-213ENST00000529828 AIDAQ96BJ3 306 aa4.83□□□□□ -1.64
PTPRC-213ENST00000529828 CNTNAP1P78357 1384 aa4.83□□□□□ -1.64
PTPRC-213ENST00000529828 DLEC1Q9Y238 1755 aa4.83□□□□□ -1.64
PTPRC-213ENST00000529828 NRXN2Q9P2S2 1712 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 CCDC88AQ3V6T2 1871 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 LBX1P52954 281 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 FAM161AQ3B820 660 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 AKAP4Q5JQC9 854 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 PRR5LQ6MZQ0 368 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 MORC1Q86VD1 984 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 TAOK3Q9H2K8 898 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 PANK3Q9H999 370 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 TBC1D2BQ9UPU7 963 aa4.82□□□□□ -1.64
PTPRC-213ENST00000529828 NPHP1O15259 732 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 RNMTO43148 476 aaKnown RBP4.81□□□□□ -1.64
PTPRC-213ENST00000529828 IL13P35225 146 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 CTCFP49711 727 aaPredicted RBP4.81□□□□□ -1.64
PTPRC-213ENST00000529828 OLFM4Q6UX06 510 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 PCDHB13Q9Y5F0 798 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 ZNF541Q9H0D2 1346 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 MRC1P22897 1456 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 ANKRD31Q8N7Z5 1873 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 SCN11AQ9UI33 1791 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 PIP4K2AP48426 406 aaPredicted RBP4.81□□□□□ -1.64
PTPRC-213ENST00000529828 GRM1Q13255 1194 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 MTHFSDQ2M296 383 aaKnown RBP4.81□□□□□ -1.64
PTPRC-213ENST00000529828 PRPF40BQ6NWY9 871 aaKnown RBP4.81□□□□□ -1.64
PTPRC-213ENST00000529828 TAF1DQ9H5J8 278 aaPredicted RBP4.81□□□□□ -1.64
PTPRC-213ENST00000529828 DAXXQ9UER7 740 aaPredicted RBP4.81□□□□□ -1.64
PTPRC-213ENST00000529828 PASKQ96RG2 1323 aa4.81□□□□□ -1.64
PTPRC-213ENST00000529828 TMEM88BA6NKF7 163 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 SLC34A2O95436 690 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 PDE6BP35913 854 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 EMP3P54852 163 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 EIF5P55010 431 aaKnown RBP4.8□□□□□ -1.64
PTPRC-213ENST00000529828 CNGB1Q14028 1251 aaPredicted RBP4.8□□□□□ -1.64
PTPRC-213ENST00000529828 LDHDQ86WU2 507 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 CNBD1Q8NA66 436 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 ABHD8Q96I13 439 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 BRIP1Q9BX63 1249 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 PRDM10Q9NQV6 1147 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 ZNF277Q9NRM2 450 aaPredicted RBP4.8□□□□□ -1.64
PTPRC-213ENST00000529828 RNF123Q5XPI4 1314 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 CACNA1SQ13698 1873 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 FAM177BA6PVY3 158 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 STARD3NLO95772 234 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 A1BGP04217 495 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 HSPA8P11142 646 aaKnown RBP4.8□□□□□ -1.64
PTPRC-213ENST00000529828 FMR1Q06787 632 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPRC-213ENST00000529828 MAP1SQ66K74 1059 aaPredicted RBP4.8□□□□□ -1.64
PTPRC-213ENST00000529828 PAXIP1Q6ZW49 1069 aaPredicted RBP4.8□□□□□ -1.64
PTPRC-213ENST00000529828 TTC5Q8N0Z6 440 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 OCEL1Q9H607 264 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 WBP1LQ9NX94 342 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 SCN7AQ01118 1682 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 FER1L6Q2WGJ9 1857 aa4.8□□□□□ -1.64
PTPRC-213ENST00000529828 IQCA1LA6NCM1 817 aa4.79□□□□□ -1.64
PTPRC-213ENST00000529828 CCDC85CA6NKD9 419 aa4.79□□□□□ -1.64
PTPRC-213ENST00000529828 IRX5P78411 483 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-213ENST00000529828 ST5P78524 1137 aa4.79□□□□□ -1.64
PTPRC-213ENST00000529828 ZNF496Q96IT1 587 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-213ENST00000529828 CFAP44Q96MT7 982 aa4.79□□□□□ -1.64
PTPRC-213ENST00000529828 SETDB2Q96T68 719 aa4.79□□□□□ -1.64
PTPRC-213ENST00000529828 TMEM106CQ9BVX2 250 aa4.79□□□□□ -1.64
PTPRC-213ENST00000529828 TSKSQ9UJT2 592 aa4.79□□□□□ -1.64
PTPRC-213ENST00000529828 ABT1Q9ULW3 272 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms