RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 PASKQ96RG2 1323 aa14.35□□□□□ -0.11
LDLRAD3-204ENST00000529759 LTBP3Q9NS15 1303 aa14.35□□□□□ -0.11
LDLRAD3-204ENST00000529759 BCORQ6W2J9 1755 aa14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 A0A087WZG4 1122 aa14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 GNAT3A8MTJ3 354 aa14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 U2SURPO15042 1029 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 ITGBL1O95965 494 aaPredicted RBP14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 CNBD1Q8NA66 436 aa14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 SETDB2Q96T68 719 aa14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 ZNF541Q9H0D2 1346 aa14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 ARFGEF2Q9Y6D5 1785 aa14.34□□□□□ -0.11
LDLRAD3-204ENST00000529759 NBPF26B4DH59 902 aa14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 VEGFBP49765 207 aa14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 TEFQ10587 303 aa14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 STYK1Q6J9G0 422 aa14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 NBPF10Q6P3W6 841 aaKnown RBP14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 NBPF15Q8N660 670 aa14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 TAF1DQ9H5J8 278 aaPredicted RBP14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 ZNF277Q9NRM2 450 aaPredicted RBP14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 CEMIPQ8WUJ3 1361 aa14.33□□□□□ -0.12
LDLRAD3-204ENST00000529759 GAS2L2Q8NHY3 880 aa14.32□□□□□ -0.12
LDLRAD3-204ENST00000529759 CNTNAP1P78357 1384 aa14.32□□□□□ -0.12
LDLRAD3-204ENST00000529759 COL4A5P29400 1685 aa14.31□□□□□ -0.12
LDLRAD3-204ENST00000529759 FAM177BA6PVY3 158 aa14.31□□□□□ -0.12
LDLRAD3-204ENST00000529759 CNKSR1Q969H4 720 aa14.31□□□□□ -0.12
LDLRAD3-204ENST00000529759 MASTLQ96GX5 879 aa14.31□□□□□ -0.12
LDLRAD3-204ENST00000529759 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
LDLRAD3-204ENST00000529759 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
LDLRAD3-204ENST00000529759 DCTN1Q14203 1278 aa14.3□□□□□ -0.12
LDLRAD3-204ENST00000529759 HLFQ16534 295 aa14.3□□□□□ -0.12
LDLRAD3-204ENST00000529759 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
LDLRAD3-204ENST00000529759 CFAP53Q96M91 514 aa14.3□□□□□ -0.12
LDLRAD3-204ENST00000529759 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
LDLRAD3-204ENST00000529759 LAMB4A4D0S4 1761 aa14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 ADAMTSL1Q8N6G6 1762 aa14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 SCN4AP35499 1836 aa14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 KLRG2A4D1S0 409 aaPredicted RBP14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 MCM10Q7L590 875 aa14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 RSPH6AQ9H0K4 717 aa14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 DLG5Q8TDM6 1919 aa14.29□□□□□ -0.12
LDLRAD3-204ENST00000529759 ST5P78524 1137 aa14.28□□□□□ -0.12
LDLRAD3-204ENST00000529759 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
LDLRAD3-204ENST00000529759 LDHDQ86WU2 507 aa14.28□□□□□ -0.12
LDLRAD3-204ENST00000529759 NBPF5PQ86XG9 351 aaPredicted RBP14.28□□□□□ -0.12
LDLRAD3-204ENST00000529759 MIS18AQ9NYP9 233 aa14.28□□□□□ -0.12
LDLRAD3-204ENST00000529759 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
LDLRAD3-204ENST00000529759 LTBP1Q14766 1721 aa14.27□□□□□ -0.12
LDLRAD3-204ENST00000529759 SNED1Q8TER0 1413 aa14.27□□□□□ -0.12
LDLRAD3-204ENST00000529759 RNF123Q5XPI4 1314 aa14.27□□□□□ -0.12
LDLRAD3-204ENST00000529759 NPHP1O15259 732 aa14.27□□□□□ -0.13
LDLRAD3-204ENST00000529759 LBX1P52954 281 aa14.27□□□□□ -0.13
LDLRAD3-204ENST00000529759 FKBP4Q02790 459 aaKnown RBP eCLIP14.27□□□□□ -0.13
LDLRAD3-204ENST00000529759 WBP1LQ9NX94 342 aa14.27□□□□□ -0.13
LDLRAD3-204ENST00000529759 TMEM88BA6NKF7 163 aa14.26□□□□□ -0.13
LDLRAD3-204ENST00000529759 NPR1P16066 1061 aa14.26□□□□□ -0.13
LDLRAD3-204ENST00000529759 CCDC93Q567U6 631 aa14.26□□□□□ -0.13
LDLRAD3-204ENST00000529759 SYNE4Q8N205 404 aa14.26□□□□□ -0.13
LDLRAD3-204ENST00000529759 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
LDLRAD3-204ENST00000529759 KDM3BQ7LBC6 1761 aa14.25□□□□□ -0.13
LDLRAD3-204ENST00000529759 EPHX2P34913 555 aa14.25□□□□□ -0.13
LDLRAD3-204ENST00000529759 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
LDLRAD3-204ENST00000529759 NUDCQ9Y266 331 aa14.25□□□□□ -0.13
LDLRAD3-204ENST00000529759 ABCC12Q96J65 1359 aa14.24□□□□□ -0.13
LDLRAD3-204ENST00000529759 FZD9O00144 591 aa14.24□□□□□ -0.13
LDLRAD3-204ENST00000529759 PPP2R1AP30153 589 aa14.24□□□□□ -0.13
LDLRAD3-204ENST00000529759 CLEC4GQ6UXB4 293 aa14.24□□□□□ -0.13
LDLRAD3-204ENST00000529759 NUTM1Q86Y26 1132 aa14.24□□□□□ -0.13
LDLRAD3-204ENST00000529759 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
LDLRAD3-204ENST00000529759 PRDM10Q9NQV6 1147 aa14.24□□□□□ -0.13
LDLRAD3-204ENST00000529759 HACL1Q9UJ83 578 aa14.24□□□□□ -0.13
LDLRAD3-204ENST00000529759 IQCA1LA6NCM1 817 aa14.23□□□□□ -0.13
LDLRAD3-204ENST00000529759 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
LDLRAD3-204ENST00000529759 HSPA8P11142 646 aaKnown RBP14.23□□□□□ -0.13
LDLRAD3-204ENST00000529759 IARSP41252 1262 aaKnown RBP14.23□□□□□ -0.13
LDLRAD3-204ENST00000529759 SOGA3Q5TF21 947 aa14.23□□□□□ -0.13
LDLRAD3-204ENST00000529759 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
LDLRAD3-204ENST00000529759 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
LDLRAD3-204ENST00000529759 NUP98P52948 1817 aa14.22□□□□□ -0.13
LDLRAD3-204ENST00000529759 U2AF1L5P0DN76 240 aaPredicted RBP14.22□□□□□ -0.13
LDLRAD3-204ENST00000529759 EPS15P42566 896 aa14.22□□□□□ -0.13
LDLRAD3-204ENST00000529759 CTCFP49711 727 aaPredicted RBP14.22□□□□□ -0.13
LDLRAD3-204ENST00000529759 U2AF1Q01081 240 aaKnown RBP eCLIP14.22□□□□□ -0.13
LDLRAD3-204ENST00000529759 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
LDLRAD3-204ENST00000529759 TTLL7Q6ZT98 887 aa14.22□□□□□ -0.13
LDLRAD3-204ENST00000529759 RASSF10A6NK89 507 aa14.21□□□□□ -0.13
LDLRAD3-204ENST00000529759 TRAF5O00463 557 aa14.21□□□□□ -0.13
LDLRAD3-204ENST00000529759 TCERG1O14776 1098 aaKnown RBP14.21□□□□□ -0.13
LDLRAD3-204ENST00000529759 DEFB115Q30KQ5 88 aa14.21□□□□□ -0.13
LDLRAD3-204ENST00000529759 CST9Q5W186 159 aa14.2□□□□□ -0.14
LDLRAD3-204ENST00000529759 NPM2Q86SE8 214 aaKnown RBP14.2□□□□□ -0.14
LDLRAD3-204ENST00000529759 RTF1Q92541 710 aaKnown RBP14.2□□□□□ -0.14
LDLRAD3-204ENST00000529759 GJA3Q9Y6H8 435 aa14.2□□□□□ -0.14
LDLRAD3-204ENST00000529759 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
LDLRAD3-204ENST00000529759 WDR33Q9C0J8 1336 aaKnown RBP14.19□□□□□ -0.14
LDLRAD3-204ENST00000529759 GPTP24298 496 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms