RNA–Protein interactions for RNA: ENST00000529573.1

PDZD3-211, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-211ENST00000529573 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
PDZD3-211ENST00000529573 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
PDZD3-211ENST00000529573 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
PDZD3-211ENST00000529573 SOGA3Q5TF21 947 aa13.33□□□□□ -0.28
PDZD3-211ENST00000529573 C7orf43Q8WVR3 580 aa13.33□□□□□ -0.28
PDZD3-211ENST00000529573 MASTLQ96GX5 879 aa13.33□□□□□ -0.28
PDZD3-211ENST00000529573 U2SURPO15042 1029 aaKnown RBP13.32□□□□□ -0.28
PDZD3-211ENST00000529573 KCNQ3O43525 872 aa13.32□□□□□ -0.28
PDZD3-211ENST00000529573 ST5P78524 1137 aa13.32□□□□□ -0.28
PDZD3-211ENST00000529573 DZIP3Q86Y13 1208 aaKnown RBP13.32□□□□□ -0.28
PDZD3-211ENST00000529573 CACNA1SQ13698 1873 aa13.31□□□□□ -0.28
PDZD3-211ENST00000529573 CLEC4GQ6UXB4 293 aa13.31□□□□□ -0.28
PDZD3-211ENST00000529573 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
PDZD3-211ENST00000529573 L3MBTL3Q96JM7 780 aaPredicted RBP13.31□□□□□ -0.28
PDZD3-211ENST00000529573 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
PDZD3-211ENST00000529573 KLRG2A4D1S0 409 aaPredicted RBP13.3□□□□□ -0.28
PDZD3-211ENST00000529573 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
PDZD3-211ENST00000529573 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
PDZD3-211ENST00000529573 NPHP1O15259 732 aa13.3□□□□□ -0.28
PDZD3-211ENST00000529573 LDHDQ86WU2 507 aa13.3□□□□□ -0.28
PDZD3-211ENST00000529573 PHACTR3Q96KR7 559 aa13.3□□□□□ -0.28
PDZD3-211ENST00000529573 TAF1DQ9H5J8 278 aaPredicted RBP13.3□□□□□ -0.28
PDZD3-211ENST00000529573 USP16Q9Y5T5 823 aa13.3□□□□□ -0.28
PDZD3-211ENST00000529573 PASKQ96RG2 1323 aa13.3□□□□□ -0.28
PDZD3-211ENST00000529573 CNTNAP1P78357 1384 aa13.3□□□□□ -0.28
PDZD3-211ENST00000529573 SCN4AP35499 1836 aa13.29□□□□□ -0.28
PDZD3-211ENST00000529573 CCDC93Q567U6 631 aa13.29□□□□□ -0.28
PDZD3-211ENST00000529573 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
PDZD3-211ENST00000529573 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
PDZD3-211ENST00000529573 RGL2O15211 777 aa13.28□□□□□ -0.28
PDZD3-211ENST00000529573 NPR1P16066 1061 aa13.28□□□□□ -0.28
PDZD3-211ENST00000529573 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
PDZD3-211ENST00000529573 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
PDZD3-211ENST00000529573 CCER1Q8TC90 406 aaPredicted RBP13.28□□□□□ -0.28
PDZD3-211ENST00000529573 FOXN1O15353 648 aa13.27□□□□□ -0.29
PDZD3-211ENST00000529573 ITGBL1O95965 494 aaPredicted RBP13.27□□□□□ -0.29
PDZD3-211ENST00000529573 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
PDZD3-211ENST00000529573 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.29
PDZD3-211ENST00000529573 ZNF652Q9Y2D9 606 aa13.27□□□□□ -0.29
PDZD3-211ENST00000529573 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
PDZD3-211ENST00000529573 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
PDZD3-211ENST00000529573 NBPF10Q6P3W6 841 aaKnown RBP13.26□□□□□ -0.29
PDZD3-211ENST00000529573 TPTE2Q6XPS3 522 aa13.26□□□□□ -0.29
PDZD3-211ENST00000529573 NBPF15Q8N660 670 aa13.26□□□□□ -0.29
PDZD3-211ENST00000529573 ADAMTSL1Q8N6G6 1762 aa13.26□□□□□ -0.29
PDZD3-211ENST00000529573 ZNF541Q9H0D2 1346 aa13.26□□□□□ -0.29
PDZD3-211ENST00000529573 PRDM10Q9NQV6 1147 aa13.26□□□□□ -0.29
PDZD3-211ENST00000529573 ZNF277Q9NRM2 450 aaPredicted RBP13.26□□□□□ -0.29
PDZD3-211ENST00000529573 TMEM88BA6NKF7 163 aa13.25□□□□□ -0.29
PDZD3-211ENST00000529573 OLFM4Q6UX06 510 aa13.25□□□□□ -0.29
PDZD3-211ENST00000529573 RTKN2Q8IZC4 609 aa13.25□□□□□ -0.29
PDZD3-211ENST00000529573 NIP7Q9Y221 180 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDZD3-211ENST00000529573 SNED1Q8TER0 1413 aa13.24□□□□□ -0.29
PDZD3-211ENST00000529573 FZD9O00144 591 aa13.24□□□□□ -0.29
PDZD3-211ENST00000529573 VEGFBP49765 207 aa13.24□□□□□ -0.29
PDZD3-211ENST00000529573 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
PDZD3-211ENST00000529573 MCM10Q7L590 875 aa13.24□□□□□ -0.29
PDZD3-211ENST00000529573 HACL1Q9UJ83 578 aa13.24□□□□□ -0.29
PDZD3-211ENST00000529573 EPHX2P34913 555 aa13.23□□□□□ -0.29
PDZD3-211ENST00000529573 EAPPQ56P03 285 aaPredicted RBP13.23□□□□□ -0.29
PDZD3-211ENST00000529573 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
PDZD3-211ENST00000529573 CFAP53Q96M91 514 aa13.23□□□□□ -0.29
PDZD3-211ENST00000529573 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
PDZD3-211ENST00000529573 IARSP41252 1262 aaKnown RBP13.22□□□□□ -0.29
PDZD3-211ENST00000529573 CTCFP49711 727 aaPredicted RBP13.22□□□□□ -0.29
PDZD3-211ENST00000529573 HLFQ16534 295 aa13.22□□□□□ -0.29
PDZD3-211ENST00000529573 CRY2Q49AN0 593 aa13.22□□□□□ -0.29
PDZD3-211ENST00000529573 SYNE4Q8N205 404 aa13.22□□□□□ -0.29
PDZD3-211ENST00000529573 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
PDZD3-211ENST00000529573 NUDCQ9Y266 331 aa13.22□□□□□ -0.29
PDZD3-211ENST00000529573 RNF123Q5XPI4 1314 aa13.21□□□□□ -0.29
PDZD3-211ENST00000529573 RASSF10A6NK89 507 aa13.21□□□□□ -0.29
PDZD3-211ENST00000529573 HTATSF1O43719 755 aaKnown RBP13.21□□□□□ -0.29
PDZD3-211ENST00000529573 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
PDZD3-211ENST00000529573 PNMA8AQ86V59 439 aaPredicted RBP13.21□□□□□ -0.29
PDZD3-211ENST00000529573 GPC2Q8N158 579 aa13.21□□□□□ -0.29
PDZD3-211ENST00000529573 AIDAQ96BJ3 306 aa13.21□□□□□ -0.29
PDZD3-211ENST00000529573 PSMD1Q99460 953 aa13.21□□□□□ -0.29
PDZD3-211ENST00000529573 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
PDZD3-211ENST00000529573 U2AF1L5P0DN76 240 aaPredicted RBP13.2□□□□□ -0.3
PDZD3-211ENST00000529573 U2AF1Q01081 240 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDZD3-211ENST00000529573 CNTROBQ8N137 903 aa13.2□□□□□ -0.3
PDZD3-211ENST00000529573 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
PDZD3-211ENST00000529573 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
PDZD3-211ENST00000529573 COL4A5P29400 1685 aa13.19□□□□□ -0.3
PDZD3-211ENST00000529573 TAF7Q15545 349 aaPredicted RBP13.19□□□□□ -0.3
PDZD3-211ENST00000529573 MAP1SQ66K74 1059 aaPredicted RBP13.19□□□□□ -0.3
PDZD3-211ENST00000529573 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
PDZD3-211ENST00000529573 LAMB4A4D0S4 1761 aa13.19□□□□□ -0.3
PDZD3-211ENST00000529573 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
PDZD3-211ENST00000529573 GTF2E1P29083 439 aaPredicted RBP13.18□□□□□ -0.3
PDZD3-211ENST00000529573 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
PDZD3-211ENST00000529573 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
PDZD3-211ENST00000529573 LBX1P52954 281 aa13.18□□□□□ -0.3
PDZD3-211ENST00000529573 DEFB115Q30KQ5 88 aa13.18□□□□□ -0.3
PDZD3-211ENST00000529573 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
PDZD3-211ENST00000529573 NYXQ9GZU5 481 aa13.18□□□□□ -0.3
PDZD3-211ENST00000529573 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
PDZD3-211ENST00000529573 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
PDZD3-211ENST00000529573 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms