RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 ZNF330Q9Y3S2 320 aaPredicted RBP24.22■■□□□ 1.47
LTBP3-211ENST00000528966 TTC5Q8N0Z6 440 aa24.21■■□□□ 1.47
LTBP3-211ENST00000528966 MASTLQ96GX5 879 aa24.21■■□□□ 1.47
LTBP3-211ENST00000528966 ZNF496Q96IT1 587 aaPredicted RBP24.21■■□□□ 1.47
LTBP3-211ENST00000528966 HEG1Q9ULI3 1381 aa24.2■■□□□ 1.46
LTBP3-211ENST00000528966 SETDB2Q96T68 719 aa24.2■■□□□ 1.46
LTBP3-211ENST00000528966 SIPA1L3O60292 1781 aaPredicted RBP24.19■■□□□ 1.46
LTBP3-211ENST00000528966 CAMTA2O94983 1202 aa24.19■■□□□ 1.46
LTBP3-211ENST00000528966 IL6STP40189 918 aaPredicted RBP24.19■■□□□ 1.46
LTBP3-211ENST00000528966 DEFB115Q30KQ5 88 aa24.19■■□□□ 1.46
LTBP3-211ENST00000528966 HACL1Q9UJ83 578 aa24.19■■□□□ 1.46
LTBP3-211ENST00000528966 NPHP1O15259 732 aa24.18■■□□□ 1.46
LTBP3-211ENST00000528966 EPHX2P34913 555 aa24.18■■□□□ 1.46
LTBP3-211ENST00000528966 ST5P78524 1137 aa24.18■■□□□ 1.46
LTBP3-211ENST00000528966 CCDC93Q567U6 631 aa24.18■■□□□ 1.46
LTBP3-211ENST00000528966 CLEC11AQ9Y240 323 aa24.18■■□□□ 1.46
LTBP3-211ENST00000528966 MAP1SQ66K74 1059 aaPredicted RBP24.17■■□□□ 1.46
LTBP3-211ENST00000528966 CNTROBQ8N137 903 aa24.17■■□□□ 1.46
LTBP3-211ENST00000528966 ZNF277Q9NRM2 450 aaPredicted RBP24.17■■□□□ 1.46
LTBP3-211ENST00000528966 WDR33Q9C0J8 1336 aaKnown RBP24.16■■□□□ 1.46
LTBP3-211ENST00000528966 A1BGP04217 495 aa24.16■■□□□ 1.46
LTBP3-211ENST00000528966 MAP2K1Q02750 393 aaPredicted RBP24.16■■□□□ 1.46
LTBP3-211ENST00000528966 FKBP4Q02790 459 aaKnown RBP eCLIP24.16■■□□□ 1.46
LTBP3-211ENST00000528966 ZNF790Q6PG37 636 aa24.16■■□□□ 1.46
LTBP3-211ENST00000528966 TEX13AQ9BXU3 409 aaPredicted RBP24.16■■□□□ 1.46
LTBP3-211ENST00000528966 THSD7BQ9C0I4 1608 aa24.16■■□□□ 1.46
LTBP3-211ENST00000528966 RNF123Q5XPI4 1314 aa24.15■■□□□ 1.46
LTBP3-211ENST00000528966 OLFM4Q6UX06 510 aa24.14■■□□□ 1.45
LTBP3-211ENST00000528966 PNMA8AQ86V59 439 aaPredicted RBP24.13■■□□□ 1.45
LTBP3-211ENST00000528966 IL17REQ8NFR9 667 aa24.12■■□□□ 1.45
LTBP3-211ENST00000528966 ABT1Q9ULW3 272 aaKnown RBP24.12■■□□□ 1.45
LTBP3-211ENST00000528966 KNSTRNQ9Y448 316 aa24.12■■□□□ 1.45
LTBP3-211ENST00000528966 FZD9O00144 591 aa24.11■■□□□ 1.45
LTBP3-211ENST00000528966 NPR1P16066 1061 aa24.11■■□□□ 1.45
LTBP3-211ENST00000528966 RGS19P49795 217 aa24.11■■□□□ 1.45
LTBP3-211ENST00000528966 MLLT1Q03111 559 aaPredicted RBP24.11■■□□□ 1.45
LTBP3-211ENST00000528966 DZIP3Q86Y13 1208 aaKnown RBP24.11■■□□□ 1.45
LTBP3-211ENST00000528966 KLRG2A4D1S0 409 aaPredicted RBP24.1■■□□□ 1.45
LTBP3-211ENST00000528966 TEFQ10587 303 aa24.1■■□□□ 1.45
LTBP3-211ENST00000528966 AMER1Q5JTC6 1135 aaPredicted RBP24.1■■□□□ 1.45
LTBP3-211ENST00000528966 NBPF5PQ86XG9 351 aaPredicted RBP24.1■■□□□ 1.45
LTBP3-211ENST00000528966 TIMELESSQ9UNS1 1208 aa24.1■■□□□ 1.45
LTBP3-211ENST00000528966 LTBP1Q14766 1721 aa24.1■■□□□ 1.45
LTBP3-211ENST00000528966 CCDC85CA6NKD9 419 aa24.09■■□□□ 1.45
LTBP3-211ENST00000528966 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
LTBP3-211ENST00000528966 NPM2Q86SE8 214 aaKnown RBP24.09■■□□□ 1.45
LTBP3-211ENST00000528966 FMNL2Q96PY5 1086 aa24.09■■□□□ 1.45
LTBP3-211ENST00000528966 DDX21Q9NR30 783 aaKnown RBP eCLIP24.09■■□□□ 1.45
LTBP3-211ENST00000528966 IARSP41252 1262 aaKnown RBP24.08■■□□□ 1.45
LTBP3-211ENST00000528966 GPC2Q8N158 579 aa24.08■■□□□ 1.45
LTBP3-211ENST00000528966 PIP4K2AP48426 406 aaPredicted RBP24.07■■□□□ 1.44
LTBP3-211ENST00000528966 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
LTBP3-211ENST00000528966 FMR1Q06787 632 aaKnown RBP eCLIP24.07■■□□□ 1.44
LTBP3-211ENST00000528966 RTKN2Q8IZC4 609 aa24.07■■□□□ 1.44
LTBP3-211ENST00000528966 TNRC18O15417 2968 aaPredicted RBP24.07■■□□□ 1.44
LTBP3-211ENST00000528966 SNED1Q8TER0 1413 aa24.07■■□□□ 1.44
LTBP3-211ENST00000528966 TRPM7Q96QT4 1865 aa24.07■■□□□ 1.44
LTBP3-211ENST00000528966 COL4A5P29400 1685 aa24.06■■□□□ 1.44
LTBP3-211ENST00000528966 KCNQ3O43525 872 aa24.06■■□□□ 1.44
LTBP3-211ENST00000528966 DIAPH1O60610 1272 aaKnown RBP24.06■■□□□ 1.44
LTBP3-211ENST00000528966 CLEC4GQ6UXB4 293 aa24.06■■□□□ 1.44
LTBP3-211ENST00000528966 CAPNS2Q96L46 248 aa24.06■■□□□ 1.44
LTBP3-211ENST00000528966 GNAT3A8MTJ3 354 aa24.05■■□□□ 1.44
LTBP3-211ENST00000528966 SYNE4Q8N205 404 aa24.05■■□□□ 1.44
LTBP3-211ENST00000528966 PCDH10Q9P2E7 1040 aa24.05■■□□□ 1.44
LTBP3-211ENST00000528966 USP16Q9Y5T5 823 aa24.04■■□□□ 1.44
LTBP3-211ENST00000528966 CYP4F22Q6NT55 531 aa24.03■■□□□ 1.44
LTBP3-211ENST00000528966 CEMIPQ8WUJ3 1361 aa24.03■■□□□ 1.44
LTBP3-211ENST00000528966 GPR101Q96P66 508 aaPredicted RBP24.02■■□□□ 1.44
LTBP3-211ENST00000528966 TSKSQ9UJT2 592 aa24.02■■□□□ 1.44
LTBP3-211ENST00000528966 PDE4DIPQ5VU43 2346 aa24.02■■□□□ 1.44
LTBP3-211ENST00000528966 PRAMEF22A3QJZ6 481 aa24.01■■□□□ 1.43
LTBP3-211ENST00000528966 ECE1P42892 770 aa24.01■■□□□ 1.43
LTBP3-211ENST00000528966 GRM1Q13255 1194 aa24.01■■□□□ 1.43
LTBP3-211ENST00000528966 CST9Q5W186 159 aa24.01■■□□□ 1.43
LTBP3-211ENST00000528966 TPTE2Q6XPS3 522 aa24.01■■□□□ 1.43
LTBP3-211ENST00000528966 PAXIP1Q6ZW49 1069 aaPredicted RBP24.01■■□□□ 1.43
LTBP3-211ENST00000528966 GAS2L2Q8NHY3 880 aa24.01■■□□□ 1.43
LTBP3-211ENST00000528966 BEGAINQ9BUH8 593 aa24.01■■□□□ 1.43
LTBP3-211ENST00000528966 ZNF652Q9Y2D9 606 aa24.01■■□□□ 1.43
LTBP3-211ENST00000528966 COL3A1P02461 1466 aaPredicted RBP24■■□□□ 1.43
LTBP3-211ENST00000528966 PSMD1Q99460 953 aa24■■□□□ 1.43
LTBP3-211ENST00000528966 NIP7Q9Y221 180 aaKnown RBP eCLIP24■■□□□ 1.43
LTBP3-211ENST00000528966 GJA3Q9Y6H8 435 aa24■■□□□ 1.43
LTBP3-211ENST00000528966 CASP8AP2Q9UKL3 1982 aa24■■□□□ 1.43
LTBP3-211ENST00000528966 TRAF5O00463 557 aa23.99■■□□□ 1.43
LTBP3-211ENST00000528966 SCNN1DP51172 638 aa23.99■■□□□ 1.43
LTBP3-211ENST00000528966 JDP2Q8WYK2 163 aa23.99■■□□□ 1.43
LTBP3-211ENST00000528966 FAM177BA6PVY3 158 aa23.98■■□□□ 1.43
LTBP3-211ENST00000528966 BTBD11A6QL63 1104 aa23.98■■□□□ 1.43
LTBP3-211ENST00000528966 ALDH1B1P30837 517 aa23.98■■□□□ 1.43
LTBP3-211ENST00000528966 EPS15P42566 896 aa23.98■■□□□ 1.43
LTBP3-211ENST00000528966 LMOD1P29536 600 aaPredicted RBP23.97■■□□□ 1.43
LTBP3-211ENST00000528966 EIF6P56537 245 aaKnown RBP23.97■■□□□ 1.43
LTBP3-211ENST00000528966 TLL2Q9Y6L7 1015 aa23.97■■□□□ 1.43
LTBP3-211ENST00000528966 AOC2O75106 756 aa23.96■■□□□ 1.43
LTBP3-211ENST00000528966 NBPF26B4DH59 902 aa23.95■■□□□ 1.42
LTBP3-211ENST00000528966 RGL2O15211 777 aa23.95■■□□□ 1.42
LTBP3-211ENST00000528966 NBPF10Q6P3W6 841 aaKnown RBP23.95■■□□□ 1.42
LTBP3-211ENST00000528966 NBPF15Q8N660 670 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms