RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 COL11A2P13942 1736 aaPredicted RBP15.48■□□□□ 0.07
CMTM1-211ENST00000528484 POTECB2RU33 542 aa15.48■□□□□ 0.07
CMTM1-211ENST00000528484 A1BGP04217 495 aa15.48■□□□□ 0.07
CMTM1-211ENST00000528484 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
CMTM1-211ENST00000528484 RTF1Q92541 710 aaKnown RBP15.48■□□□□ 0.07
CMTM1-211ENST00000528484 MKRN1Q9UHC7 482 aaKnown RBP15.48■□□□□ 0.07
CMTM1-211ENST00000528484 DDNO94850 711 aaPredicted RBP15.47■□□□□ 0.07
CMTM1-211ENST00000528484 CAMTA2O94983 1202 aa15.47■□□□□ 0.07
CMTM1-211ENST00000528484 SRGNP10124 158 aa15.47■□□□□ 0.07
CMTM1-211ENST00000528484 CACNA1SQ13698 1873 aa15.47■□□□□ 0.07
CMTM1-211ENST00000528484 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
CMTM1-211ENST00000528484 LDHDQ86WU2 507 aa15.47■□□□□ 0.07
CMTM1-211ENST00000528484 AIDAQ96BJ3 306 aa15.47■□□□□ 0.07
CMTM1-211ENST00000528484 CLEC4GQ6UXB4 293 aa15.46■□□□□ 0.07
CMTM1-211ENST00000528484 NUDCQ9Y266 331 aa15.46■□□□□ 0.07
CMTM1-211ENST00000528484 SIPA1L3O60292 1781 aaPredicted RBP15.46■□□□□ 0.07
CMTM1-211ENST00000528484 ARFGEF2Q9Y6D5 1785 aa15.45■□□□□ 0.06
CMTM1-211ENST00000528484 PER1O15534 1290 aaPredicted RBP15.45■□□□□ 0.06
CMTM1-211ENST00000528484 NPR1P16066 1061 aa15.45■□□□□ 0.06
CMTM1-211ENST00000528484 TPTE2Q6XPS3 522 aa15.45■□□□□ 0.06
CMTM1-211ENST00000528484 NPC1L1Q9UHC9 1359 aa15.45■□□□□ 0.06
CMTM1-211ENST00000528484 SLX4Q8IY92 1834 aa15.45■□□□□ 0.06
CMTM1-211ENST00000528484 SNRPA1P09661 255 aaKnown RBP15.44■□□□□ 0.06
CMTM1-211ENST00000528484 GTF2E1P29083 439 aaPredicted RBP15.44■□□□□ 0.06
CMTM1-211ENST00000528484 SCN4AP35499 1836 aa15.44■□□□□ 0.06
CMTM1-211ENST00000528484 CEMIPQ8WUJ3 1361 aa15.44■□□□□ 0.06
CMTM1-211ENST00000528484 BCORQ6W2J9 1755 aa15.44■□□□□ 0.06
CMTM1-211ENST00000528484 PRKAR2BP31323 418 aa15.43■□□□□ 0.06
CMTM1-211ENST00000528484 FKBP4Q02790 459 aaKnown RBP eCLIP15.43■□□□□ 0.06
CMTM1-211ENST00000528484 EAPPQ56P03 285 aaPredicted RBP15.43■□□□□ 0.06
CMTM1-211ENST00000528484 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
CMTM1-211ENST00000528484 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
CMTM1-211ENST00000528484 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
CMTM1-211ENST00000528484 COL3A1P02461 1466 aaPredicted RBP15.43■□□□□ 0.06
CMTM1-211ENST00000528484 CNTNAP1P78357 1384 aa15.42■□□□□ 0.06
CMTM1-211ENST00000528484 TMEM88BA6NKF7 163 aa15.42■□□□□ 0.06
CMTM1-211ENST00000528484 ALDH1B1P30837 517 aa15.42■□□□□ 0.06
CMTM1-211ENST00000528484 TAF1DQ9H5J8 278 aaPredicted RBP15.42■□□□□ 0.06
CMTM1-211ENST00000528484 HACL1Q9UJ83 578 aa15.42■□□□□ 0.06
CMTM1-211ENST00000528484 NIP7Q9Y221 180 aaKnown RBP eCLIP15.42■□□□□ 0.06
CMTM1-211ENST00000528484 RGL2O15211 777 aa15.41■□□□□ 0.06
CMTM1-211ENST00000528484 POTEIP0CG38 1075 aa15.41■□□□□ 0.06
CMTM1-211ENST00000528484 POTEJP0CG39 1038 aa15.41■□□□□ 0.06
CMTM1-211ENST00000528484 PNMA8AQ86V59 439 aaPredicted RBP15.41■□□□□ 0.06
CMTM1-211ENST00000528484 USP16Q9Y5T5 823 aa15.41■□□□□ 0.06
CMTM1-211ENST00000528484 NEFMP07197 916 aa15.4■□□□□ 0.06
CMTM1-211ENST00000528484 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
CMTM1-211ENST00000528484 CTCFP49711 727 aaPredicted RBP15.4■□□□□ 0.06
CMTM1-211ENST00000528484 PRDM10Q9NQV6 1147 aa15.4■□□□□ 0.06
CMTM1-211ENST00000528484 ZNF277Q9NRM2 450 aaPredicted RBP15.4■□□□□ 0.06
CMTM1-211ENST00000528484 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
CMTM1-211ENST00000528484 KCNQ3O43525 872 aa15.39■□□□□ 0.05
CMTM1-211ENST00000528484 U2AF1L5P0DN76 240 aaPredicted RBP15.39■□□□□ 0.05
CMTM1-211ENST00000528484 EPHX2P34913 555 aa15.39■□□□□ 0.05
CMTM1-211ENST00000528484 U2AF1Q01081 240 aaKnown RBP eCLIP15.39■□□□□ 0.05
CMTM1-211ENST00000528484 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
CMTM1-211ENST00000528484 NYXQ9GZU5 481 aa15.39■□□□□ 0.05
CMTM1-211ENST00000528484 RSPH6AQ9H0K4 717 aa15.39■□□□□ 0.05
CMTM1-211ENST00000528484 PASKQ96RG2 1323 aa15.39■□□□□ 0.05
CMTM1-211ENST00000528484 C7orf43Q8WVR3 580 aa15.38■□□□□ 0.05
CMTM1-211ENST00000528484 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
CMTM1-211ENST00000528484 KLRG2A4D1S0 409 aaPredicted RBP15.37■□□□□ 0.05
CMTM1-211ENST00000528484 FOXN1O15353 648 aa15.37■□□□□ 0.05
CMTM1-211ENST00000528484 HTATSF1O43719 755 aaKnown RBP15.37■□□□□ 0.05
CMTM1-211ENST00000528484 LMOD1P29536 600 aaPredicted RBP15.37■□□□□ 0.05
CMTM1-211ENST00000528484 IARSP41252 1262 aaKnown RBP15.37■□□□□ 0.05
CMTM1-211ENST00000528484 MCM10Q7L590 875 aa15.37■□□□□ 0.05
CMTM1-211ENST00000528484 ZNF541Q9H0D2 1346 aa15.37■□□□□ 0.05
CMTM1-211ENST00000528484 VEGFBP49765 207 aa15.36■□□□□ 0.05
CMTM1-211ENST00000528484 EIF6P56537 245 aaKnown RBP15.36■□□□□ 0.05
CMTM1-211ENST00000528484 GRIPAP1Q4V328 841 aa15.36■□□□□ 0.05
CMTM1-211ENST00000528484 CC2D2BQ6DHV5 1058 aa15.36■□□□□ 0.05
CMTM1-211ENST00000528484 GPC2Q8N158 579 aa15.36■□□□□ 0.05
CMTM1-211ENST00000528484 SYNE4Q8N205 404 aa15.36■□□□□ 0.05
CMTM1-211ENST00000528484 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
CMTM1-211ENST00000528484 PRAMEF22A3QJZ6 481 aa15.35■□□□□ 0.05
CMTM1-211ENST00000528484 MAP2K1Q02750 393 aaPredicted RBP15.35■□□□□ 0.05
CMTM1-211ENST00000528484 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
CMTM1-211ENST00000528484 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
CMTM1-211ENST00000528484 RPGRQ92834 1020 aaKnown RBP15.35■□□□□ 0.05
CMTM1-211ENST00000528484 ABT1Q9ULW3 272 aaKnown RBP15.35■□□□□ 0.05
CMTM1-211ENST00000528484 RNF123Q5XPI4 1314 aa15.35■□□□□ 0.05
CMTM1-211ENST00000528484 ITGBL1O95965 494 aaPredicted RBP15.34■□□□□ 0.05
CMTM1-211ENST00000528484 TAF7Q15545 349 aaPredicted RBP15.34■□□□□ 0.05
CMTM1-211ENST00000528484 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
CMTM1-211ENST00000528484 PNISRQ8TF01 805 aaKnown RBP15.34■□□□□ 0.05
CMTM1-211ENST00000528484 PSMD1Q99460 953 aa15.34■□□□□ 0.05
CMTM1-211ENST00000528484 FZD9O00144 591 aa15.33■□□□□ 0.04
CMTM1-211ENST00000528484 MAP1SQ66K74 1059 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-211ENST00000528484 BEGAINQ9BUH8 593 aa15.33■□□□□ 0.04
CMTM1-211ENST00000528484 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
CMTM1-211ENST00000528484 RASSF10A6NK89 507 aa15.32■□□□□ 0.04
CMTM1-211ENST00000528484 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
CMTM1-211ENST00000528484 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
CMTM1-211ENST00000528484 NBPF10Q6P3W6 841 aaKnown RBP15.32■□□□□ 0.04
CMTM1-211ENST00000528484 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
CMTM1-211ENST00000528484 PAXIP1Q6ZW49 1069 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-211ENST00000528484 NGEFQ8N5V2 710 aa15.32■□□□□ 0.04
CMTM1-211ENST00000528484 NBPF15Q8N660 670 aa15.32■□□□□ 0.04
CMTM1-211ENST00000528484 WBP1LQ9NX94 342 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms