RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 PNMA6EA0A0J9YXQ4 647 aa9.57□□□□□ -0.88
SOX6-211ENST00000528429 EXOC6BQ9Y2D4 811 aa9.57□□□□□ -0.88
SOX6-211ENST00000528429 DISP2A7MBM2 1401 aa9.57□□□□□ -0.88
SOX6-211ENST00000528429 FAM43BQ6ZT52 329 aaPredicted RBP9.56□□□□□ -0.88
SOX6-211ENST00000528429 PXDNLA1KZ92 1463 aa9.56□□□□□ -0.88
SOX6-211ENST00000528429 CACNA1FO60840 1977 aa9.56□□□□□ -0.88
SOX6-211ENST00000528429 SMARCA5O60264 1052 aaPredicted RBP9.56□□□□□ -0.88
SOX6-211ENST00000528429 A1BGP04217 495 aa9.56□□□□□ -0.88
SOX6-211ENST00000528429 JCADQ9P266 1359 aa9.56□□□□□ -0.88
SOX6-211ENST00000528429 NEXNQ0ZGT2 675 aa9.55□□□□□ -0.88
SOX6-211ENST00000528429 ANKRD13DQ6ZTN6 518 aa9.55□□□□□ -0.88
SOX6-211ENST00000528429 ACSBG1Q96GR2 724 aa9.55□□□□□ -0.88
SOX6-211ENST00000528429 MYD88Q99836 296 aa9.55□□□□□ -0.88
SOX6-211ENST00000528429 C5P01031 1676 aa9.55□□□□□ -0.88
SOX6-211ENST00000528429 SPATA31A5Q5VU36 1347 aa9.55□□□□□ -0.88
SOX6-211ENST00000528429 SPATA31A7Q8IWB4 1347 aa9.55□□□□□ -0.88
SOX6-211ENST00000528429 PRIM1P49642 420 aaKnown RBP9.55□□□□□ -0.88
SOX6-211ENST00000528429 FAM98CQ17RN3 349 aaKnown RBP9.55□□□□□ -0.88
SOX6-211ENST00000528429 C16orf71Q8IYS4 520 aaPredicted RBP9.55□□□□□ -0.88
SOX6-211ENST00000528429 NBPF26B4DH59 902 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 NBPF14Q5TI25 921 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 NBPF10Q6P3W6 841 aaKnown RBP9.54□□□□□ -0.88
SOX6-211ENST00000528429 UNC5CLQ8IV45 518 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 NBPF15Q8N660 670 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 LINS1Q8NG48 757 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
SOX6-211ENST00000528429 ATG3Q9NT62 314 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 PLCH1Q4KWH8 1693 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 SRGAP3O43295 1099 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 ALDH1L1O75891 902 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 ATP8B2P98198 1209 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 MEX3CQ5U5Q3 659 aaKnown RBP9.54□□□□□ -0.88
SOX6-211ENST00000528429 PPP1R42Q7Z4L9 355 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 DNAJC10Q8IXB1 793 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 THRAP3Q9Y2W1 955 aaKnown RBP9.54□□□□□ -0.88
SOX6-211ENST00000528429 SHANK3Q9BYB0 1731 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 TNS2Q63HR2 1409 aa9.54□□□□□ -0.88
SOX6-211ENST00000528429 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 SEC24BO95487 1268 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 HSPA1LP34931 641 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 LRP10Q7Z4F1 713 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 OTUD7AQ8TE49 926 aaPredicted RBP9.53□□□□□ -0.88
SOX6-211ENST00000528429 GRM8O00222 908 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 IGKV5-2P06315 115 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 TTLL7Q6ZT98 887 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 JARID2Q92833 1246 aaPredicted RBP9.53□□□□□ -0.88
SOX6-211ENST00000528429 ZBTB3Q9H5J0 574 aa9.53□□□□□ -0.88
SOX6-211ENST00000528429 SLIT2O94813 1529 aa9.52□□□□□ -0.88
SOX6-211ENST00000528429 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.88
SOX6-211ENST00000528429 MARCH10Q8NA82 808 aaPredicted RBP9.52□□□□□ -0.88
SOX6-211ENST00000528429 METTL22Q9BUU2 404 aaPredicted RBP9.52□□□□□ -0.88
SOX6-211ENST00000528429 KCPQ6ZWJ8 1503 aa9.52□□□□□ -0.89
SOX6-211ENST00000528429 NEURL1BA8MQ27 555 aa9.52□□□□□ -0.89
SOX6-211ENST00000528429 SURF6O75683 361 aaKnown RBP9.52□□□□□ -0.89
SOX6-211ENST00000528429 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.89
SOX6-211ENST00000528429 USP21Q9UK80 565 aa9.52□□□□□ -0.89
SOX6-211ENST00000528429 TOGARAM1Q9Y4F4 1720 aa9.52□□□□□ -0.89
SOX6-211ENST00000528429 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
SOX6-211ENST00000528429 BCL9O00512 1426 aa9.51□□□□□ -0.89
SOX6-211ENST00000528429 STARD3NLO95772 234 aa9.51□□□□□ -0.89
SOX6-211ENST00000528429 OS9Q13438 667 aaPredicted RBP9.51□□□□□ -0.89
SOX6-211ENST00000528429 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
SOX6-211ENST00000528429 PLBD2Q8NHP8 589 aa9.51□□□□□ -0.89
SOX6-211ENST00000528429 LRRCC1Q9C099 1032 aa9.51□□□□□ -0.89
SOX6-211ENST00000528429 GCKRQ14397 625 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 BARGINQ6ZT62 677 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 UBE3BQ7Z3V4 1068 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 SSH3Q8TE77 659 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 UPF2Q9HAU5 1272 aaKnown RBP9.5□□□□□ -0.89
SOX6-211ENST00000528429 IL1RAPL2Q9NP60 686 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 ERBB4Q15303 1308 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 GLI3P10071 1580 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 MFAP1P55081 439 aaKnown RBP9.5□□□□□ -0.89
SOX6-211ENST00000528429 VPS72Q15906 364 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 BMP2KLQ5H9B9 411 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 TSHZ3Q63HK5 1081 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 BICC1Q9H694 974 aaKnown RBP9.5□□□□□ -0.89
SOX6-211ENST00000528429 SPATA31A6Q5VVP1 1343 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 NRAPQ86VF7 1730 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 BCL9LQ86UU0 1499 aa9.5□□□□□ -0.89
SOX6-211ENST00000528429 A0A087WZG4 1122 aa9.49□□□□□ -0.89
SOX6-211ENST00000528429 SLC4A9Q96Q91 983 aa9.49□□□□□ -0.89
SOX6-211ENST00000528429 ARID3AQ99856 593 aa9.49□□□□□ -0.89
SOX6-211ENST00000528429 TEX13AQ9BXU3 409 aaPredicted RBP9.49□□□□□ -0.89
SOX6-211ENST00000528429 HDAC5Q9UQL6 1122 aa9.49□□□□□ -0.89
SOX6-211ENST00000528429 IPO9Q96P70 1041 aaKnown RBP9.49□□□□□ -0.89
SOX6-211ENST00000528429 PA2G4Q9UQ80 394 aaKnown RBP9.49□□□□□ -0.89
SOX6-211ENST00000528429 IBTKQ9P2D0 1353 aaPredicted RBP9.49□□□□□ -0.89
SOX6-211ENST00000528429 LRP6O75581 1613 aa9.49□□□□□ -0.89
SOX6-211ENST00000528429 KCNQ2O43526 872 aa9.49□□□□□ -0.89
SOX6-211ENST00000528429 GSPT1P15170 499 aaKnown RBP9.49□□□□□ -0.89
SOX6-211ENST00000528429 FAM182BQ5T319 152 aa9.49□□□□□ -0.89
SOX6-211ENST00000528429 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
SOX6-211ENST00000528429 POLA2Q14181 598 aa9.48□□□□□ -0.89
SOX6-211ENST00000528429 KAZALD1Q96I82 304 aa9.48□□□□□ -0.89
SOX6-211ENST00000528429 PRDM16Q9HAZ2 1276 aa9.48□□□□□ -0.89
SOX6-211ENST00000528429 CWC22Q9HCG8 908 aaKnown RBP9.48□□□□□ -0.89
SOX6-211ENST00000528429 TTC22Q5TAA0 569 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms