RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 HIP1O00291 1037 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 ALDH1L1O75891 902 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 TPM3P06753 285 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 VPS53Q5VIR6 699 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 SASS6Q6UVJ0 657 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 BRINP3Q76B58 766 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 PPP1R42Q7Z4L9 355 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 NSFL1CQ9UNZ2 370 aaKnown RBP12.35□□□□□ -0.43
MSRA-210ENST00000528246 SNX14Q9Y5W7 946 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
MSRA-210ENST00000528246 RGPD8O14715 1765 aaPredicted RBP12.34□□□□□ -0.43
MSRA-210ENST00000528246 KIAA2012Q0VF49 1180 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 GPATCH3Q96I76 525 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
MSRA-210ENST00000528246 DCCP43146 1447 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 SURF6O75683 361 aaKnown RBP12.34□□□□□ -0.43
MSRA-210ENST00000528246 NLRP6P59044 892 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 UNC5CLQ8IV45 518 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 DNAAF4Q8WXU2 420 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
MSRA-210ENST00000528246 NFAT5O94916 1531 aa12.33□□□□□ -0.43
MSRA-210ENST00000528246 PLEKHG2Q9H7P9 1386 aa12.33□□□□□ -0.44
MSRA-210ENST00000528246 STX6O43752 255 aa12.33□□□□□ -0.44
MSRA-210ENST00000528246 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
MSRA-210ENST00000528246 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
MSRA-210ENST00000528246 ZNF772Q68DY9 489 aaPredicted RBP12.33□□□□□ -0.44
MSRA-210ENST00000528246 SRGAP3O43295 1099 aa12.32□□□□□ -0.44
MSRA-210ENST00000528246 F13A1P00488 732 aa12.32□□□□□ -0.44
MSRA-210ENST00000528246 IP6K1Q92551 441 aa12.32□□□□□ -0.44
MSRA-210ENST00000528246 ZSWIM6Q9HCJ5 1215 aa12.32□□□□□ -0.44
MSRA-210ENST00000528246 MST1RQ04912 1400 aa12.32□□□□□ -0.44
MSRA-210ENST00000528246 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
MSRA-210ENST00000528246 LTN1O94822 1766 aa12.32□□□□□ -0.44
MSRA-210ENST00000528246 HEG1Q9ULI3 1381 aa12.32□□□□□ -0.44
MSRA-210ENST00000528246 TSHZ3Q63HK5 1081 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 CLASRPQ8N2M8 674 aaKnown RBP12.31□□□□□ -0.44
MSRA-210ENST00000528246 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 UPF3BQ9BZI7 483 aaKnown RBP12.31□□□□□ -0.44
MSRA-210ENST00000528246 SMC3Q9UQE7 1217 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 UTYO14607 1347 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 ELP1O95163 1332 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 SPATA31A6Q5VVP1 1343 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 CAMTA1Q9Y6Y1 1673 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 SYT1P21579 422 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 AK2P54819 239 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 TICAM2Q86XR7 235 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 EVI5LQ96CN4 794 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 HYPKQ9NX55 129 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 DBF4Q9UBU7 674 aaPredicted RBP12.31□□□□□ -0.44
MSRA-210ENST00000528246 USP25Q9UHP3 1055 aa12.31□□□□□ -0.44
MSRA-210ENST00000528246 PDCP20941 246 aa12.3□□□□□ -0.44
MSRA-210ENST00000528246 GTF2F1P35269 517 aaKnown RBP eCLIP12.3□□□□□ -0.44
MSRA-210ENST00000528246 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
MSRA-210ENST00000528246 MEX3CQ5U5Q3 659 aaKnown RBP12.3□□□□□ -0.44
MSRA-210ENST00000528246 RUFY3Q7L099 469 aa12.3□□□□□ -0.44
MSRA-210ENST00000528246 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
MSRA-210ENST00000528246 DDX17Q92841 729 aaKnown RBP12.3□□□□□ -0.44
MSRA-210ENST00000528246 FUCA2Q9BTY2 467 aa12.3□□□□□ -0.44
MSRA-210ENST00000528246 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
MSRA-210ENST00000528246 SPTLC3Q9NUV7 552 aa12.3□□□□□ -0.44
MSRA-210ENST00000528246 R3HCC1Q9Y3T6 440 aaKnown RBP12.3□□□□□ -0.44
MSRA-210ENST00000528246 MRC1P22897 1456 aa12.3□□□□□ -0.44
MSRA-210ENST00000528246 ANKRD1Q15327 319 aa12.29□□□□□ -0.44
MSRA-210ENST00000528246 IL25Q9H293 177 aa12.29□□□□□ -0.44
MSRA-210ENST00000528246 DIAPH3Q9NSV4 1193 aa12.29□□□□□ -0.44
MSRA-210ENST00000528246 ADCY9O60503 1353 aa12.29□□□□□ -0.44
MSRA-210ENST00000528246 RFX7Q2KHR2 1363 aa12.29□□□□□ -0.44
MSRA-210ENST00000528246 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
MSRA-210ENST00000528246 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
MSRA-210ENST00000528246 GADD45BO75293 160 aaPredicted RBP12.28□□□□□ -0.44
MSRA-210ENST00000528246 PTMAP06454 111 aaKnown RBP12.28□□□□□ -0.44
MSRA-210ENST00000528246 ZKSCAN1P17029 563 aaPredicted RBP12.28□□□□□ -0.44
MSRA-210ENST00000528246 PSMA5P28066 241 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 RXRBP28702 533 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 XPCQ01831 940 aaPredicted RBP12.28□□□□□ -0.44
MSRA-210ENST00000528246 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 TSGA10IPQ3SY00 556 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
MSRA-210ENST00000528246 PHAXQ9H814 394 aaKnown RBP12.28□□□□□ -0.44
MSRA-210ENST00000528246 CYP46A1Q9Y6A2 500 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 KDM4AO75164 1064 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 UQCRHP07919 91 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 MYRIPQ8NFW9 859 aa12.28□□□□□ -0.44
MSRA-210ENST00000528246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
MSRA-210ENST00000528246 EP400Q96L91 3159 aa12.27□□□□□ -0.44
MSRA-210ENST00000528246 SIPA1L3O60292 1781 aaPredicted RBP12.27□□□□□ -0.45
MSRA-210ENST00000528246 PI4KAP2A4QPH2 592 aa12.27□□□□□ -0.45
MSRA-210ENST00000528246 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
MSRA-210ENST00000528246 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
MSRA-210ENST00000528246 PI4KAP1Q8N8J0 262 aa12.27□□□□□ -0.45
MSRA-210ENST00000528246 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
MSRA-210ENST00000528246 RNF214Q8ND24 703 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms