RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 SMC1BQ8NDV3 1235 aa23.24■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 IFFO2Q5TF58 517 aa23.23■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 STYK1Q6J9G0 422 aa23.23■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 DLG5Q8TDM6 1919 aa23.22■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 VEGFAP15692 232 aaPredicted RBP23.22■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 TAF7Q15545 349 aaPredicted RBP23.22■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 PNISRQ8TF01 805 aaKnown RBP23.22■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 LTBP3Q9NS15 1303 aa23.22■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 CACNA1SQ13698 1873 aa23.22■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 DPY19L2Q6NUT2 758 aa23.21■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 MASTLQ96GX5 879 aa23.21■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 KDM3BQ7LBC6 1761 aa23.21■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 C21orf2O43822 256 aa23.2■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 PRELPP51888 382 aa23.2■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 NBPF5PQ86XG9 351 aaPredicted RBP23.2■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 DNAJC5GQ8N7S2 189 aa23.2■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 SRGNP10124 158 aa23.19■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 DCTN1Q14203 1278 aa23.19■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 PRAMEF22A3QJZ6 481 aa23.18■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 CCDC24Q8N4L8 307 aa23.18■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 TAOK3Q9H2K8 898 aa23.18■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 SLX4Q8IY92 1834 aa23.17■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 PIP4K2AP48426 406 aaPredicted RBP23.17■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 PRPF40BQ6NWY9 871 aaKnown RBP23.17■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 TPTE2Q6XPS3 522 aa23.17■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 ERFEQ4G0M1 354 aa23.16■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 NBPF26B4DH59 902 aa23.15■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 NBPF10Q6P3W6 841 aaKnown RBP23.15■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 NBPF15Q8N660 670 aa23.15■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 KLRG1Q96E93 195 aa23.15■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 ZNF219Q9P2Y4 722 aaPredicted RBP23.15■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 NIP7Q9Y221 180 aaKnown RBP eCLIP23.15■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 MAPK8IP3Q9UPT6 1336 aa23.14■■□□□ 1.3
CKLF-CMTM1-202ENST00000527845 NPR1P16066 1061 aa23.14■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 KLRG2A4D1S0 409 aaPredicted RBP23.13■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 CCDC93Q567U6 631 aa23.12■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 NYXQ9GZU5 481 aa23.11■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 ERVV-1B6SEH8 477 aa23.1■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 JMYQ8N9B5 988 aa23.1■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 NUP98P52948 1817 aa23.1■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 GTF2E1P29083 439 aaPredicted RBP23.09■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 KIF6Q6ZMV9 814 aa23.09■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 MIS18AQ9NYP9 233 aa23.09■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 ERBB4Q15303 1308 aa23.08■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 ALDH1B1P30837 517 aa23.08■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 IBTKQ9P2D0 1353 aaPredicted RBP23.08■■□□□ 1.29
CKLF-CMTM1-202ENST00000527845 RTKN2Q8IZC4 609 aa23.07■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 C7orf43Q8WVR3 580 aa23.07■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 SCN4AP35499 1836 aa23.07■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 RIC1Q4ADV7 1423 aa23.07■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 MAP3K15Q6ZN16 1313 aa23.07■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 POTECB2RU33 542 aa23.06■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 HTRA3P83110 453 aa23.06■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 FKBP4Q02790 459 aaKnown RBP eCLIP23.06■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 HLFQ16534 295 aa23.06■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 IQCA1LA6NCM1 817 aa23.05■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 RALBP1Q15311 655 aa23.05■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 LMOD3Q0VAK6 560 aa23.03■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 BABAM1Q9NWV8 329 aa23.03■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 RRP7AQ9Y3A4 280 aaKnown RBP23.03■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 CRY2Q49AN0 593 aa23.02■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 L3MBTL3Q96JM7 780 aaPredicted RBP23.02■■□□□ 1.28
CKLF-CMTM1-202ENST00000527845 DDNO94850 711 aaPredicted RBP23.01■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 GRIPAP1Q4V328 841 aa23.01■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 CC2D2BQ6DHV5 1058 aa23.01■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 CHADLQ6NUI6 762 aa23.01■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 NGEFQ8N5V2 710 aa23.01■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 THUMPD2Q9BTF0 503 aaKnown RBP23.01■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 TSPYL4Q9UJ04 414 aa23.01■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 ABCC12Q96J65 1359 aa23■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 MYL6BP14649 208 aa22.99■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 TTLL7Q6ZT98 887 aa22.99■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 RPGRQ92834 1020 aaKnown RBP22.99■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 RIPK4P57078 832 aa22.98■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 PSMD1Q99460 953 aa22.98■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 IARSP41252 1262 aaKnown RBP22.97■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 PARP10Q53GL7 1025 aa22.97■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 GIGYF2Q6Y7W6 1299 aaKnown RBP22.97■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 PPP1R42Q7Z4L9 355 aa22.97■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 LDHDQ86WU2 507 aa22.97■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 NUTM1Q86Y26 1132 aa22.97■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 ZBTB3Q9H5J0 574 aa22.97■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 ZNF277Q9NRM2 450 aaPredicted RBP22.97■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 HOXA10P31260 410 aaPredicted RBP22.96■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 ZNF34Q8IZ26 560 aa22.96■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 CREBZFQ9NS37 354 aa22.96■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 UBN2Q6ZU65 1347 aa22.96■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 SNED1Q8TER0 1413 aa22.96■■□□□ 1.27
CKLF-CMTM1-202ENST00000527845 GPTP24298 496 aa22.95■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 ANKRD36CQ5JPF3 1778 aa22.95■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 RNF123Q5XPI4 1314 aa22.95■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 SYNE4Q8N205 404 aa22.95■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 JDP2Q8WYK2 163 aa22.95■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 RBM17Q96I25 401 aaKnown RBP22.95■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 MYBBP1AQ9BQG0 1328 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms