RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PDE6BP35913 854 aa25.29■■□□□ 1.64
CAPN1-211ENST00000527739 CLEC4GQ6UXB4 293 aa25.29■■□□□ 1.64
CAPN1-211ENST00000527739 TTLL6Q8N841 843 aa25.29■■□□□ 1.64
CAPN1-211ENST00000527739 BRIP1Q9BX63 1249 aa25.29■■□□□ 1.64
CAPN1-211ENST00000527739 SBF1O95248 1867 aa25.28■■□□□ 1.64
CAPN1-211ENST00000527739 MYL6BP14649 208 aa25.28■■□□□ 1.64
CAPN1-211ENST00000527739 ST5P78524 1137 aa25.28■■□□□ 1.64
CAPN1-211ENST00000527739 RASSF7Q02833 373 aa25.28■■□□□ 1.64
CAPN1-211ENST00000527739 NBPF5PQ86XG9 351 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-211ENST00000527739 DNAJC5GQ8N7S2 189 aa25.28■■□□□ 1.64
CAPN1-211ENST00000527739 LAS1LQ9Y4W2 734 aaKnown RBP25.28■■□□□ 1.64
CAPN1-211ENST00000527739 FAM177BA6PVY3 158 aa25.27■■□□□ 1.64
CAPN1-211ENST00000527739 NIP7Q9Y221 180 aaKnown RBP eCLIP25.27■■□□□ 1.64
CAPN1-211ENST00000527739 EIF2S2P20042 333 aaKnown RBP25.26■■□□□ 1.63
CAPN1-211ENST00000527739 PRELPP51888 382 aa25.26■■□□□ 1.63
CAPN1-211ENST00000527739 RBM46Q8TBY0 533 aaKnown RBP25.26■■□□□ 1.63
CAPN1-211ENST00000527739 RRAGCQ9HB90 399 aa25.26■■□□□ 1.63
CAPN1-211ENST00000527739 HTRA3P83110 453 aa25.25■■□□□ 1.63
CAPN1-211ENST00000527739 ZNF219Q9P2Y4 722 aaPredicted RBP25.25■■□□□ 1.63
CAPN1-211ENST00000527739 DLG5Q8TDM6 1919 aa25.24■■□□□ 1.63
CAPN1-211ENST00000527739 HLFQ16534 295 aa25.24■■□□□ 1.63
CAPN1-211ENST00000527739 DLEC1Q9Y238 1755 aa25.23■■□□□ 1.63
CAPN1-211ENST00000527739 WDR90Q96KV7 1748 aa25.23■■□□□ 1.63
CAPN1-211ENST00000527739 KDM2BQ8NHM5 1336 aa25.23■■□□□ 1.63
CAPN1-211ENST00000527739 KIF6Q6ZMV9 814 aa25.23■■□□□ 1.63
CAPN1-211ENST00000527739 PDZRN3Q9UPQ7 1066 aa25.23■■□□□ 1.63
CAPN1-211ENST00000527739 GTF2E1P29083 439 aaPredicted RBP25.22■■□□□ 1.63
CAPN1-211ENST00000527739 TPTE2Q6XPS3 522 aa25.22■■□□□ 1.63
CAPN1-211ENST00000527739 C16orf71Q8IYS4 520 aaPredicted RBP25.22■■□□□ 1.63
CAPN1-211ENST00000527739 BABAM1Q9NWV8 329 aa25.22■■□□□ 1.63
CAPN1-211ENST00000527739 SCN7AQ01118 1682 aa25.21■■□□□ 1.63
CAPN1-211ENST00000527739 TTLL7Q6ZT98 887 aa25.21■■□□□ 1.63
CAPN1-211ENST00000527739 TRIM35Q9UPQ4 493 aa25.21■■□□□ 1.63
CAPN1-211ENST00000527739 NECTIN2Q92692 538 aa25.2■■□□□ 1.62
CAPN1-211ENST00000527739 ZBTB3Q9H5J0 574 aa25.2■■□□□ 1.62
CAPN1-211ENST00000527739 TNRC6CQ9HCJ0 1690 aaKnown RBP25.2■■□□□ 1.62
CAPN1-211ENST00000527739 MAP3K15Q6ZN16 1313 aa25.18■■□□□ 1.62
CAPN1-211ENST00000527739 ERVV-1B6SEH8 477 aa25.18■■□□□ 1.62
CAPN1-211ENST00000527739 RGL2O15211 777 aa25.18■■□□□ 1.62
CAPN1-211ENST00000527739 C21orf2O43822 256 aa25.18■■□□□ 1.62
CAPN1-211ENST00000527739 ZNF316A6NFI3 1004 aaPredicted RBP25.17■■□□□ 1.62
CAPN1-211ENST00000527739 FSTL1Q12841 308 aa25.17■■□□□ 1.62
CAPN1-211ENST00000527739 CNKSR1Q969H4 720 aa25.17■■□□□ 1.62
CAPN1-211ENST00000527739 ANKRD31Q8N7Z5 1873 aa25.17■■□□□ 1.62
CAPN1-211ENST00000527739 KDM3BQ7LBC6 1761 aa25.16■■□□□ 1.62
CAPN1-211ENST00000527739 CHL1O00533 1208 aa25.16■■□□□ 1.62
CAPN1-211ENST00000527739 LMNB1P20700 586 aa25.16■■□□□ 1.62
CAPN1-211ENST00000527739 GPTP24298 496 aa25.16■■□□□ 1.62
CAPN1-211ENST00000527739 MASTLQ96GX5 879 aa25.16■■□□□ 1.62
CAPN1-211ENST00000527739 ERBB4Q15303 1308 aa25.15■■□□□ 1.62
CAPN1-211ENST00000527739 NFKBIEO00221 500 aa25.15■■□□□ 1.62
CAPN1-211ENST00000527739 APAF1O14727 1248 aa25.15■■□□□ 1.62
CAPN1-211ENST00000527739 ANXA1P04083 346 aa25.15■■□□□ 1.62
CAPN1-211ENST00000527739 SRGNP10124 158 aa25.15■■□□□ 1.62
CAPN1-211ENST00000527739 STYK1Q6J9G0 422 aa25.15■■□□□ 1.62
CAPN1-211ENST00000527739 KRT24Q2M2I5 525 aa25.14■■□□□ 1.62
CAPN1-211ENST00000527739 COL11A2P13942 1736 aaPredicted RBP25.13■■□□□ 1.61
CAPN1-211ENST00000527739 TIAM2Q8IVF5 1701 aa25.13■■□□□ 1.61
CAPN1-211ENST00000527739 AIMP1Q12904 312 aaKnown RBP25.13■■□□□ 1.61
CAPN1-211ENST00000527739 NYXQ9GZU5 481 aa25.13■■□□□ 1.61
CAPN1-211ENST00000527739 CCDC88AQ3V6T2 1871 aa25.13■■□□□ 1.61
CAPN1-211ENST00000527739 PDIA6Q15084 440 aa25.12■■□□□ 1.61
CAPN1-211ENST00000527739 PROSER3Q2NL68 480 aa25.12■■□□□ 1.61
CAPN1-211ENST00000527739 PRPF40BQ6NWY9 871 aaKnown RBP25.12■■□□□ 1.61
CAPN1-211ENST00000527739 NUTM1Q86Y26 1132 aa25.12■■□□□ 1.61
CAPN1-211ENST00000527739 KLRG1Q96E93 195 aa25.12■■□□□ 1.61
CAPN1-211ENST00000527739 ZC3H4Q9UPT8 1303 aaKnown RBP25.12■■□□□ 1.61
CAPN1-211ENST00000527739 BCORQ6W2J9 1755 aa25.11■■□□□ 1.61
CAPN1-211ENST00000527739 GLTPD2A6NH11 291 aa25.11■■□□□ 1.61
CAPN1-211ENST00000527739 NPR1P16066 1061 aa25.11■■□□□ 1.61
CAPN1-211ENST00000527739 CCDC184Q52MB2 194 aa25.1■■□□□ 1.61
CAPN1-211ENST00000527739 GIGYF2Q6Y7W6 1299 aaKnown RBP25.1■■□□□ 1.61
CAPN1-211ENST00000527739 LAMB4A4D0S4 1761 aa25.1■■□□□ 1.61
CAPN1-211ENST00000527739 ERFEQ4G0M1 354 aa25.09■■□□□ 1.61
CAPN1-211ENST00000527739 COPS6Q7L5N1 327 aa25.09■■□□□ 1.61
CAPN1-211ENST00000527739 SMC1BQ8NDV3 1235 aa25.09■■□□□ 1.61
CAPN1-211ENST00000527739 CFAP44Q96MT7 982 aa25.09■■□□□ 1.61
CAPN1-211ENST00000527739 ANP32CO43423 234 aa25.08■■□□□ 1.61
CAPN1-211ENST00000527739 SUSD4Q5VX71 490 aa25.08■■□□□ 1.61
CAPN1-211ENST00000527739 XAGE3Q8WTP9 111 aa25.08■■□□□ 1.61
CAPN1-211ENST00000527739 HDGFL1Q5TGJ6 251 aa25.07■■□□□ 1.6
CAPN1-211ENST00000527739 ZNF34Q8IZ26 560 aa25.07■■□□□ 1.6
CAPN1-211ENST00000527739 KLRG2A4D1S0 409 aaPredicted RBP25.06■■□□□ 1.6
CAPN1-211ENST00000527739 POTECB2RU33 542 aa25.06■■□□□ 1.6
CAPN1-211ENST00000527739 VEGFAP15692 232 aaPredicted RBP25.06■■□□□ 1.6
CAPN1-211ENST00000527739 CALD1Q05682 793 aaKnown RBP25.06■■□□□ 1.6
CAPN1-211ENST00000527739 SOGA3Q5TF21 947 aa25.06■■□□□ 1.6
CAPN1-211ENST00000527739 LRP10Q7Z4F1 713 aa25.06■■□□□ 1.6
CAPN1-211ENST00000527739 PPP1R42Q7Z4L9 355 aa25.06■■□□□ 1.6
CAPN1-211ENST00000527739 JMYQ8N9B5 988 aa25.06■■□□□ 1.6
CAPN1-211ENST00000527739 DDX21Q9NR30 783 aaKnown RBP eCLIP25.06■■□□□ 1.6
CAPN1-211ENST00000527739 MBIPQ9NS73 344 aa25.06■■□□□ 1.6
CAPN1-211ENST00000527739 UBN2Q6ZU65 1347 aa25.06■■□□□ 1.6
CAPN1-211ENST00000527739 TAOK3Q9H2K8 898 aa25.05■■□□□ 1.6
CAPN1-211ENST00000527739 CHPF2Q9P2E5 772 aa25.05■■□□□ 1.6
CAPN1-211ENST00000527739 FER1L6Q2WGJ9 1857 aa25.04■■□□□ 1.6
CAPN1-211ENST00000527739 ALDH1B1P30837 517 aa25.04■■□□□ 1.6
CAPN1-211ENST00000527739 PARP10Q53GL7 1025 aa25.04■■□□□ 1.6
CAPN1-211ENST00000527739 DUSP27Q5VZP5 1158 aa25.04■■□□□ 1.6
CAPN1-211ENST00000527739 GNAI1P63096 354 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 197.5 ms