RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CEP85Q6P2H3 762 aa17.94■□□□□ 0.46
USP47-207ENST00000527733 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
USP47-207ENST00000527733 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
USP47-207ENST00000527733 IGSF1Q8N6C5 1336 aa17.94■□□□□ 0.46
USP47-207ENST00000527733 TTC22Q5TAA0 569 aa17.93■□□□□ 0.46
USP47-207ENST00000527733 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
USP47-207ENST00000527733 ZSCAN31Q96LW9 406 aaPredicted RBP17.93■□□□□ 0.46
USP47-207ENST00000527733 DCTPP1Q9H773 170 aa17.93■□□□□ 0.46
USP47-207ENST00000527733 RTCBQ9Y3I0 505 aaKnown RBP17.93■□□□□ 0.46
USP47-207ENST00000527733 RBM5P52756 815 aaKnown RBP eCLIP17.93■□□□□ 0.46
USP47-207ENST00000527733 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
USP47-207ENST00000527733 FAM98CQ17RN3 349 aaKnown RBP17.92■□□□□ 0.46
USP47-207ENST00000527733 ZNF496Q96IT1 587 aaPredicted RBP17.92■□□□□ 0.46
USP47-207ENST00000527733 MADDQ8WXG6 1647 aa17.92■□□□□ 0.46
USP47-207ENST00000527733 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
USP47-207ENST00000527733 STK11IPQ8N1F8 1099 aa17.92■□□□□ 0.46
USP47-207ENST00000527733 ZBTB7BO15156 539 aaPredicted RBP17.92■□□□□ 0.46
USP47-207ENST00000527733 PHKG2P15735 406 aa17.92■□□□□ 0.46
USP47-207ENST00000527733 IL15P40933 162 aaPredicted RBP17.92■□□□□ 0.46
USP47-207ENST00000527733 PRIM1P49642 420 aaKnown RBP17.92■□□□□ 0.46
USP47-207ENST00000527733 NLRP3Q96P20 1036 aa17.92■□□□□ 0.46
USP47-207ENST00000527733 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
USP47-207ENST00000527733 CCDC73Q6ZRK6 1079 aa17.91■□□□□ 0.46
USP47-207ENST00000527733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.91■□□□□ 0.465e-7■■■□□ 17.6
USP47-207ENST00000527733 NFKBIBQ15653 356 aa17.91■□□□□ 0.46
USP47-207ENST00000527733 BECN2A8MW95 431 aa17.91■□□□□ 0.46
USP47-207ENST00000527733 STK3Q13188 491 aa17.91■□□□□ 0.46
USP47-207ENST00000527733 PRPF40BQ6NWY9 871 aaKnown RBP17.91■□□□□ 0.46
USP47-207ENST00000527733 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
USP47-207ENST00000527733 TBC1D9Q6ZT07 1266 aa17.91■□□□□ 0.46
USP47-207ENST00000527733 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
USP47-207ENST00000527733 USP21Q9UK80 565 aa17.91■□□□□ 0.46
USP47-207ENST00000527733 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
USP47-207ENST00000527733 GOLIM4O00461 696 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 PDE1AP54750 535 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 IKQ13123 557 aaPredicted RBP17.9■□□□□ 0.46
USP47-207ENST00000527733 TSHZ3Q63HK5 1081 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 SMC5Q8IY18 1101 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 UBAC1Q9BSL1 405 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 CCDC69A6NI79 296 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 GOLGA6L19H0YKK7 550 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
USP47-207ENST00000527733 GSE1Q14687 1217 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 ST5P78524 1137 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 TTF1Q15361 905 aaPredicted RBP17.9■□□□□ 0.46
USP47-207ENST00000527733 TRIM22Q8IYM9 498 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 SNRKQ9NRH2 765 aa17.9■□□□□ 0.46
USP47-207ENST00000527733 ANKRD18AQ8IVF6 992 aa17.89■□□□□ 0.45
USP47-207ENST00000527733 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.45
USP47-207ENST00000527733 ADGRL3Q9HAR2 1447 aa17.89■□□□□ 0.45
USP47-207ENST00000527733 ARHGEF40Q8TER5 1519 aa17.89■□□□□ 0.45
USP47-207ENST00000527733 C6orf229H3BNL8 230 aa17.89■□□□□ 0.45
USP47-207ENST00000527733 HOOK1Q9UJC3 728 aaKnown RBP17.89■□□□□ 0.45
USP47-207ENST00000527733 DZIP1Q86YF9 867 aaKnown RBP17.89■□□□□ 0.45
USP47-207ENST00000527733 CREBRFQ8IUR6 639 aa17.89■□□□□ 0.45
USP47-207ENST00000527733 TPTE2Q6XPS3 522 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 METTL22Q9BUU2 404 aaPredicted RBP17.88■□□□□ 0.45
USP47-207ENST00000527733 SETBP1Q9Y6X0 1596 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 USP19O94966 1318 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 ATP2B3Q16720 1220 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 BRINP3Q76B58 766 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 NYXQ9GZU5 481 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 NAPBQ9H115 298 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 PA2G4Q9UQ80 394 aaKnown RBP17.88■□□□□ 0.45
USP47-207ENST00000527733 A1BGP04217 495 aa17.88■□□□□ 0.45
USP47-207ENST00000527733 IRS4O14654 1257 aaPredicted RBP17.87■□□□□ 0.45
USP47-207ENST00000527733 KDM4AO75164 1064 aa17.87■□□□□ 0.45
USP47-207ENST00000527733 TCEAL9Q9UHQ7 104 aa17.87■□□□□ 0.45
USP47-207ENST00000527733 ERBB3P21860 1342 aa17.87■□□□□ 0.45
USP47-207ENST00000527733 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
USP47-207ENST00000527733 TPD52L1Q16890 204 aaPredicted RBP17.87■□□□□ 0.45
USP47-207ENST00000527733 ZSCAN29Q8IWY8 852 aaPredicted RBP17.87■□□□□ 0.45
USP47-207ENST00000527733 WDR33Q9C0J8 1336 aaKnown RBP17.87■□□□□ 0.45
USP47-207ENST00000527733 SDSP20132 328 aa17.86■□□□□ 0.45
USP47-207ENST00000527733 ATP2B2Q01814 1243 aa17.86■□□□□ 0.45
USP47-207ENST00000527733 CCDC47Q96A33 483 aaKnown RBP17.86■□□□□ 0.45
USP47-207ENST00000527733 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
USP47-207ENST00000527733 NUP133Q8WUM0 1156 aa17.86■□□□□ 0.45
USP47-207ENST00000527733 CDK12Q9NYV4 1490 aaPredicted RBP17.86■□□□□ 0.45
USP47-207ENST00000527733 LARP1BQ659C4 914 aaKnown RBP17.86■□□□□ 0.45
USP47-207ENST00000527733 CIZ1Q9ULV3 898 aaPredicted RBP17.86■□□□□ 0.45
USP47-207ENST00000527733 TMOD2Q9NZR1 351 aa17.85■□□□□ 0.45
USP47-207ENST00000527733 CCNL1Q9UK58 526 aaPredicted RBP17.85■□□□□ 0.45
USP47-207ENST00000527733 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
USP47-207ENST00000527733 CDKL5O76039 1030 aa17.85■□□□□ 0.45
USP47-207ENST00000527733 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
USP47-207ENST00000527733 GNPATO15228 680 aa17.85■□□□□ 0.45
USP47-207ENST00000527733 USP5P45974 858 aa17.85■□□□□ 0.45
USP47-207ENST00000527733 CCDC191Q8NCU4 936 aa17.85■□□□□ 0.45
USP47-207ENST00000527733 MINDY4BA8MYZ0 360 aa17.84■□□□□ 0.45
USP47-207ENST00000527733 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
USP47-207ENST00000527733 ZNF287Q9HBT7 754 aa17.84■□□□□ 0.45
USP47-207ENST00000527733 TFCP2L1Q9NZI6 479 aa17.84■□□□□ 0.45
USP47-207ENST00000527733 SPATA31A3Q5VYP0 1347 aa17.84■□□□□ 0.45
USP47-207ENST00000527733 MBD3O95983 291 aa17.84■□□□□ 0.45
USP47-207ENST00000527733 ATP2B1P20020 1258 aa17.84■□□□□ 0.45
USP47-207ENST00000527733 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
USP47-207ENST00000527733 RTN4Q9NQC3 1192 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms