RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 WDR33Q9C0J8 1336 aaKnown RBP15.07■□□□□ 0
CAPN1-208ENST00000527323 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
CAPN1-208ENST00000527323 KIAA2012Q0VF49 1180 aa15.07■□□□□ 0
CAPN1-208ENST00000527323 UNC5CLQ8IV45 518 aa15.07■□□□□ 0
CAPN1-208ENST00000527323 FLIIQ13045 1269 aa15.07■□□□□ 0
CAPN1-208ENST00000527323 SASS6Q6UVJ0 657 aa15.07■□□□□ 0
CAPN1-208ENST00000527323 BTG4Q9NY30 223 aa15.07■□□□□ 0
CAPN1-208ENST00000527323 LRRFIP2Q9Y608 721 aaKnown RBP15.07■□□□□ 0
CAPN1-208ENST00000527323 NUTM1Q86Y26 1132 aa15.06■□□□□ 0
CAPN1-208ENST00000527323 ZNF830Q96NB3 372 aaPredicted RBP15.06■□□□□ 0
CAPN1-208ENST00000527323 LARP6Q9BRS8 491 aaKnown RBP15.06■□□□□ 0
CAPN1-208ENST00000527323 SRCIN1Q9C0H9 1055 aa15.06■□□□□ 0
CAPN1-208ENST00000527323 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.06■□□□□ 02e-6■□□□□ 9.3
CAPN1-208ENST00000527323 ERBB3P21860 1342 aa15.06■□□□□ 0
CAPN1-208ENST00000527323 LTN1O94822 1766 aa15.06■□□□□ 0
CAPN1-208ENST00000527323 RGPD5Q99666 1765 aa15.06■□□□□ 0
CAPN1-208ENST00000527323 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
CAPN1-208ENST00000527323 CCDC9Q9Y3X0 531 aaKnown RBP15.06■□□□□ 0
CAPN1-208ENST00000527323 GNAT3A8MTJ3 354 aa15.05■□□□□ 0
CAPN1-208ENST00000527323 DYNC1I1O14576 645 aa15.05■□□□□ 0
CAPN1-208ENST00000527323 MARF1Q9Y4F3 1742 aaKnown RBP15.05■□□□□ -0
CAPN1-208ENST00000527323 USP25Q9UHP3 1055 aa15.05■□□□□ -0
CAPN1-208ENST00000527323 MED1Q15648 1581 aaPredicted RBP15.04■□□□□ -0
CAPN1-208ENST00000527323 CRB1P82279 1406 aa15.04■□□□□ -0
CAPN1-208ENST00000527323 RAPGEF4Q8WZA2 1011 aa15.04■□□□□ -0
CAPN1-208ENST00000527323 SALL3Q9BXA9 1300 aa15.04■□□□□ -0
CAPN1-208ENST00000527323 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
CAPN1-208ENST00000527323 UBTFL1P0CB47 393 aaPredicted RBP15.03■□□□□ -0
CAPN1-208ENST00000527323 CNPY2Q9Y2B0 182 aa15.03■□□□□ -0
CAPN1-208ENST00000527323 TNS3Q68CZ2 1445 aa15.03■□□□□ -0
CAPN1-208ENST00000527323 STAP2Q9UGK3 403 aa15.03■□□□□ -0
CAPN1-208ENST00000527323 FAM184AQ8NB25 1140 aa15.02■□□□□ -0
CAPN1-208ENST00000527323 CCDC183Q5T5S1 534 aa15.02□□□□□ -0.01
CAPN1-208ENST00000527323 IL25Q9H293 177 aa15.02□□□□□ -0.01
CAPN1-208ENST00000527323 SOS2Q07890 1332 aaPredicted RBP15.02□□□□□ -0.01
CAPN1-208ENST00000527323 NFAT5O94916 1531 aa15.02□□□□□ -0.01
CAPN1-208ENST00000527323 HSPA4P34932 840 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 FIBPO43427 364 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 ADCY5O95622 1261 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 HCLS1P14317 486 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-208ENST00000527323 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 PXDNQ92626 1479 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 UVSSAQ2YD98 709 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 FAM182BQ5T319 152 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 MTERF4Q7Z6M4 381 aaKnown RBP15.01□□□□□ -0.01
CAPN1-208ENST00000527323 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 TTC12Q9H892 705 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-208ENST00000527323 SMC3Q9UQE7 1217 aa15.01□□□□□ -0.01
CAPN1-208ENST00000527323 TEFQ10587 303 aa15□□□□□ -0.01
CAPN1-208ENST00000527323 USP44Q9H0E7 712 aa15□□□□□ -0.01
CAPN1-208ENST00000527323 ARHGEF10O15013 1369 aa14.99□□□□□ -0.01
CAPN1-208ENST00000527323 DTNBO60941 627 aa14.99□□□□□ -0.01
CAPN1-208ENST00000527323 ZSCAN22P10073 491 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-208ENST00000527323 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-208ENST00000527323 STX6O43752 255 aa14.99□□□□□ -0.01
CAPN1-208ENST00000527323 PPP1R42Q7Z4L9 355 aa14.99□□□□□ -0.01
CAPN1-208ENST00000527323 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-208ENST00000527323 LETM1O95202 739 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-208ENST00000527323 AK2P54819 239 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 NOLC1Q14978 699 aaKnown RBP eCLIP14.98□□□□□ -0.01
CAPN1-208ENST00000527323 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
CAPN1-208ENST00000527323 C17orf53Q8N3J3 647 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-208ENST00000527323 SYT1P21579 422 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 C8orf37Q96NL8 207 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 LIMCH1Q9UPQ0 1083 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 SNX14Q9Y5W7 946 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 UBE2HP62256 183 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 OS9Q13438 667 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-208ENST00000527323 PLEKHO1Q53GL0 409 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-208ENST00000527323 RHPN1Q8TCX5 695 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 SPG7Q9UQ90 795 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 ATP6V1DQ9Y5K8 247 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 UTRNP46939 3433 aa14.98□□□□□ -0.01
CAPN1-208ENST00000527323 CYP27B1O15528 508 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 SRGAP3O43295 1099 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 CPA1P15085 419 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 CNTROBQ8N137 903 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 BTBD11A6QL63 1104 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 SGSM2O43147 1006 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 HDGFL1Q5TGJ6 251 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 GIMAP6Q6P9H5 292 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 RASEFQ8IZ41 740 aa14.97□□□□□ -0.01
CAPN1-208ENST00000527323 SOS1Q07889 1333 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-208ENST00000527323 PTCD1O75127 700 aaKnown RBP14.96□□□□□ -0.01
CAPN1-208ENST00000527323 RAB11FIP3O75154 756 aa14.96□□□□□ -0.01
CAPN1-208ENST00000527323 TATP17735 454 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-208ENST00000527323 PIBF1Q8WXW3 757 aa14.96□□□□□ -0.01
CAPN1-208ENST00000527323 TSC1Q92574 1164 aa14.96□□□□□ -0.01
CAPN1-208ENST00000527323 JARID2Q92833 1246 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-208ENST00000527323 ZNF330Q9Y3S2 320 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-208ENST00000527323 KDRP35968 1356 aa14.96□□□□□ -0.01
CAPN1-208ENST00000527323 TRPM3Q9HCF6 1732 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-208ENST00000527323 CASTP20810 708 aaKnown RBP14.96□□□□□ -0.01
CAPN1-208ENST00000527323 PHAXQ9H814 394 aaKnown RBP14.96□□□□□ -0.01
CAPN1-208ENST00000527323 AOX1Q06278 1338 aa14.96□□□□□ -0.01
CAPN1-208ENST00000527323 MYRIPQ8NFW9 859 aa14.96□□□□□ -0.02
CAPN1-208ENST00000527323 SSH3Q8TE77 659 aa14.96□□□□□ -0.02
CAPN1-208ENST00000527323 RAD50Q92878 1312 aa14.95□□□□□ -0.02
CAPN1-208ENST00000527323 MAP3K5Q99683 1374 aa14.95□□□□□ -0.02
CAPN1-208ENST00000527323 TOM1O60784 492 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms