RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 MTMR14Q8NCE2 650 aa6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 ZNF417Q8TAU3 575 aa6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 ZNF587Q96SQ5 575 aaPredicted RBP6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 GZF1Q9H116 711 aaPredicted RBP6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 SHROOM4Q9ULL8 1493 aa6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 COL17A1Q9UMD9 1497 aaPredicted RBP6.18□□□□□ -1.42
CLNS1A-208ENST00000527265 TATP17735 454 aaPredicted RBP6.18□□□□□ -1.42
CLNS1A-208ENST00000527265 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
CLNS1A-208ENST00000527265 TXNRD3Q86VQ6 643 aa6.18□□□□□ -1.42
CLNS1A-208ENST00000527265 TRIM34Q9BYJ4 488 aa6.18□□□□□ -1.42
CLNS1A-208ENST00000527265 MARK1Q9P0L2 795 aa6.18□□□□□ -1.42
CLNS1A-208ENST00000527265 A0A1W2PNR3 127 aa6.17□□□□□ -1.42
CLNS1A-208ENST00000527265 FAM157BP0CG42 384 aa6.17□□□□□ -1.42
CLNS1A-208ENST00000527265 IRF5Q13568 498 aa6.17□□□□□ -1.42
CLNS1A-208ENST00000527265 FNBP4Q8N3X1 1017 aaPredicted RBP6.17□□□□□ -1.42
CLNS1A-208ENST00000527265 TP53INP1Q96A56 240 aa6.17□□□□□ -1.42
CLNS1A-208ENST00000527265 NIFKQ9BYG3 293 aaKnown RBP6.17□□□□□ -1.42
CLNS1A-208ENST00000527265 PRDM6Q9NQX0 595 aa6.17□□□□□ -1.42
CLNS1A-208ENST00000527265 COG6Q9Y2V7 657 aa6.17□□□□□ -1.42
CLNS1A-208ENST00000527265 ATP4AP20648 1035 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 NR1H3Q13133 447 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 LAMC2Q13753 1193 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 ADGRE1Q14246 886 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 MBTPS1Q14703 1052 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 TRAPPC3LQ5T215 181 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 SYT9Q86SS6 491 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 PCMTD2Q9NV79 361 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 RNF112Q9ULX5 631 aa6.16□□□□□ -1.42
CLNS1A-208ENST00000527265 ARID1BQ8NFD5 2236 aaPredicted RBP6.15□□□□□ -1.42
CLNS1A-208ENST00000527265 SOCS7O14512 581 aa6.15□□□□□ -1.42
CLNS1A-208ENST00000527265 SIN3BO75182 1162 aa6.14□□□□□ -1.43
CLNS1A-208ENST00000527265 IRAK1P51617 712 aa6.14□□□□□ -1.43
CLNS1A-208ENST00000527265 RAC1P63000 192 aa6.14□□□□□ -1.43
CLNS1A-208ENST00000527265 NEUROD1Q13562 356 aa6.14□□□□□ -1.43
CLNS1A-208ENST00000527265 FMNL2Q96PY5 1086 aa6.14□□□□□ -1.43
CLNS1A-208ENST00000527265 GDPD2Q9HCC8 539 aa6.14□□□□□ -1.43
CLNS1A-208ENST00000527265 ADARB2-AS1A8MUL3 147 aa6.13□□□□□ -1.43
CLNS1A-208ENST00000527265 USP4Q13107 963 aa6.13□□□□□ -1.43
CLNS1A-208ENST00000527265 GJD4Q96KN9 370 aaPredicted RBP6.13□□□□□ -1.43
CLNS1A-208ENST00000527265 PRM3Q9NNZ6 103 aa6.13□□□□□ -1.43
CLNS1A-208ENST00000527265 USP21Q9UK80 565 aa6.13□□□□□ -1.43
CLNS1A-208ENST00000527265 TBC1D2BQ9UPU7 963 aa6.13□□□□□ -1.43
CLNS1A-208ENST00000527265 ABL2P42684 1182 aa6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 FZD5Q13467 585 aa6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 SAMD5Q5TGI4 173 aa6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 BICDL1Q6ZP65 573 aa6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 MICALL1Q8N3F8 863 aa6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 LENG1Q96BZ8 264 aaPredicted RBP6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 SIRT1Q96EB6 747 aa6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 ETNK1Q9HBU6 452 aa6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 ZDHHC3Q9NYG2 299 aa6.12□□□□□ -1.43
CLNS1A-208ENST00000527265 LILRB5O75023 590 aa6.11□□□□□ -1.43
CLNS1A-208ENST00000527265 ALBP02768 609 aa6.11□□□□□ -1.43
CLNS1A-208ENST00000527265 NID1P14543 1247 aa6.11□□□□□ -1.43
CLNS1A-208ENST00000527265 NDUFB9Q9Y6M9 179 aa6.11□□□□□ -1.43
CLNS1A-208ENST00000527265 E9PSI1 815 aa6.1□□□□□ -1.43
CLNS1A-208ENST00000527265 SELPP16109 830 aa6.1□□□□□ -1.43
CLNS1A-208ENST00000527265 WWC1Q8IX03 1113 aa6.1□□□□□ -1.43
CLNS1A-208ENST00000527265 TNFRSF25Q93038 417 aa6.1□□□□□ -1.43
CLNS1A-208ENST00000527265 CDCA7Q9BWT1 371 aaPredicted RBP6.1□□□□□ -1.43
CLNS1A-208ENST00000527265 EFSO43281 561 aa6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 ADH7P40394 386 aa6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 COL9A3Q14050 684 aaPredicted RBP6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 C8orf86Q6ZUL3 223 aa6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 CCDC85AQ96PX6 553 aaPredicted RBP6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 ZIC5Q96T25 663 aa6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 HCN2Q9UL51 889 aa6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 DOLKQ9UPQ8 538 aa6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 RNF114Q9Y508 228 aa6.09□□□□□ -1.43
CLNS1A-208ENST00000527265 A0A0A0MRY4 1105 aa6.08□□□□□ -1.44
CLNS1A-208ENST00000527265 MDFIQ99750 246 aa6.08□□□□□ -1.44
CLNS1A-208ENST00000527265 NEUROD4Q9HD90 331 aa6.08□□□□□ -1.44
CLNS1A-208ENST00000527265 STRN4Q9NRL3 753 aa6.08□□□□□ -1.44
CLNS1A-208ENST00000527265 STARD13Q9Y3M8 1113 aa6.08□□□□□ -1.44
CLNS1A-208ENST00000527265 GPR37L1O60883 481 aa6.07□□□□□ -1.44
CLNS1A-208ENST00000527265 INHAP05111 366 aa6.07□□□□□ -1.44
CLNS1A-208ENST00000527265 CEP126Q9P2H0 1117 aa6.07□□□□□ -1.44
CLNS1A-208ENST00000527265 POM121CA8CG34 1229 aa6.06□□□□□ -1.44
CLNS1A-208ENST00000527265 PPP1R15AO75807 674 aaPredicted RBP6.06□□□□□ -1.44
CLNS1A-208ENST00000527265 HMGB1P09429 215 aaKnown RBP6.06□□□□□ -1.44
CLNS1A-208ENST00000527265 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
CLNS1A-208ENST00000527265 SMTNP53814 917 aa6.06□□□□□ -1.44
CLNS1A-208ENST00000527265 GDF10P55107 478 aa6.06□□□□□ -1.44
CLNS1A-208ENST00000527265 SHISA2Q6UWI4 295 aa6.06□□□□□ -1.44
CLNS1A-208ENST00000527265 CABP1Q9NZU7 370 aa6.06□□□□□ -1.44
CLNS1A-208ENST00000527265 PATL2C9JE40 543 aaKnown RBP6.05□□□□□ -1.44
CLNS1A-208ENST00000527265 STAU1O95793 577 aaKnown RBP6.05□□□□□ -1.44
CLNS1A-208ENST00000527265 CDK11BP21127 795 aaKnown RBP6.05□□□□□ -1.44
CLNS1A-208ENST00000527265 SLC51AQ86UW1 340 aa6.05□□□□□ -1.44
CLNS1A-208ENST00000527265 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
CLNS1A-208ENST00000527265 CDK11AQ9UQ88 783 aaPredicted RBP6.05□□□□□ -1.44
CLNS1A-208ENST00000527265 TAL1P17542 331 aaPredicted RBP6.04□□□□□ -1.44
CLNS1A-208ENST00000527265 SSTR4P31391 388 aa6.04□□□□□ -1.44
CLNS1A-208ENST00000527265 WASHC4Q2M389 1173 aa6.04□□□□□ -1.44
CLNS1A-208ENST00000527265 SLFNL1Q499Z3 407 aa6.04□□□□□ -1.44
CLNS1A-208ENST00000527265 OXLD1Q5BKU9 147 aa6.04□□□□□ -1.44
CLNS1A-208ENST00000527265 PDE4CQ08493 712 aa6.03□□□□□ -1.44
CLNS1A-208ENST00000527265 KCNA1Q09470 495 aa6.03□□□□□ -1.44
CLNS1A-208ENST00000527265 SPEM2Q0P670 501 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms