RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 JCADQ9P266 1359 aa20■□□□□ 0.79
SNRNP35-204ENST00000527158 MFAP1P55081 439 aaKnown RBP20■□□□□ 0.79
SNRNP35-204ENST00000527158 SLIT2O94813 1529 aa20■□□□□ 0.79
SNRNP35-204ENST00000527158 SYTL4Q96C24 671 aaPredicted RBP20■□□□□ 0.79
SNRNP35-204ENST00000527158 TBC1D32Q96NH3 1257 aa20■□□□□ 0.79
SNRNP35-204ENST00000527158 LRP6O75581 1613 aa19.99■□□□□ 0.79
SNRNP35-204ENST00000527158 GSPT1P15170 499 aaKnown RBP19.99■□□□□ 0.79
SNRNP35-204ENST00000527158 BARGINQ6ZT62 677 aa19.99■□□□□ 0.79
SNRNP35-204ENST00000527158 OSBPL3Q9H4L5 887 aa19.99■□□□□ 0.79
SNRNP35-204ENST00000527158 BCL9O00512 1426 aa19.99■□□□□ 0.79
SNRNP35-204ENST00000527158 NWD2Q9ULI1 1742 aa19.99■□□□□ 0.79
SNRNP35-204ENST00000527158 WNK3Q9BYP7 1800 aa19.99■□□□□ 0.79
SNRNP35-204ENST00000527158 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
SNRNP35-204ENST00000527158 EIF5BO60841 1220 aaKnown RBP19.98■□□□□ 0.79
SNRNP35-204ENST00000527158 CDC45O75419 566 aa19.98■□□□□ 0.79
SNRNP35-204ENST00000527158 STARD3NLO95772 234 aa19.98■□□□□ 0.79
SNRNP35-204ENST00000527158 UNC5CLQ8IV45 518 aa19.98■□□□□ 0.79
SNRNP35-204ENST00000527158 SUCLG2Q96I99 432 aa19.98■□□□□ 0.79
SNRNP35-204ENST00000527158 PDE1AP54750 535 aa19.97■□□□□ 0.79
SNRNP35-204ENST00000527158 NGLY1Q96IV0 654 aa19.97■□□□□ 0.79
SNRNP35-204ENST00000527158 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
SNRNP35-204ENST00000527158 KIF1BPQ96EK5 621 aa19.97■□□□□ 0.79
SNRNP35-204ENST00000527158 PRIM1P49642 420 aaKnown RBP19.96■□□□□ 0.79
SNRNP35-204ENST00000527158 TBC1D9Q6ZT07 1266 aa19.96■□□□□ 0.79
SNRNP35-204ENST00000527158 C8orf37Q96NL8 207 aa19.96■□□□□ 0.79
SNRNP35-204ENST00000527158 C22orf23Q9BZE7 217 aa19.96■□□□□ 0.79
SNRNP35-204ENST00000527158 DNAJC10Q8IXB1 793 aa19.95■□□□□ 0.78
SNRNP35-204ENST00000527158 RHPN1Q8TCX5 695 aa19.95■□□□□ 0.78
SNRNP35-204ENST00000527158 BICC1Q9H694 974 aaKnown RBP19.95■□□□□ 0.78
SNRNP35-204ENST00000527158 ITGB4P16144 1822 aa19.95■□□□□ 0.78
SNRNP35-204ENST00000527158 MX1P20591 662 aa19.95■□□□□ 0.78
SNRNP35-204ENST00000527158 OS9Q13438 667 aaPredicted RBP19.95■□□□□ 0.78
SNRNP35-204ENST00000527158 TTLL7Q6ZT98 887 aa19.95■□□□□ 0.78
SNRNP35-204ENST00000527158 ATP5J2-PTCD1G3V325 749 aa19.94■□□□□ 0.78
SNRNP35-204ENST00000527158 KAZALD1Q96I82 304 aa19.94■□□□□ 0.78
SNRNP35-204ENST00000527158 IL1RAPL2Q9NP60 686 aa19.94■□□□□ 0.78
SNRNP35-204ENST00000527158 SALL3Q9BXA9 1300 aa19.93■□□□□ 0.78
SNRNP35-204ENST00000527158 SDSP20132 328 aa19.93■□□□□ 0.78
SNRNP35-204ENST00000527158 CASC1Q6TDU7 716 aa19.93■□□□□ 0.78
SNRNP35-204ENST00000527158 ERC1Q8IUD2 1116 aa19.93■□□□□ 0.78
SNRNP35-204ENST00000527158 CERKQ8TCT0 537 aa19.93■□□□□ 0.78
SNRNP35-204ENST00000527158 ARFGEF2Q9Y6D5 1785 aa19.93■□□□□ 0.78
SNRNP35-204ENST00000527158 A0A087WZG4 1122 aa19.93■□□□□ 0.78
SNRNP35-204ENST00000527158 STAP2Q9UGK3 403 aa19.93■□□□□ 0.78
SNRNP35-204ENST00000527158 SPATA31A6Q5VVP1 1343 aa19.92■□□□□ 0.78
SNRNP35-204ENST00000527158 MARCH10Q8NA82 808 aaPredicted RBP19.92■□□□□ 0.78
SNRNP35-204ENST00000527158 ZBTB3Q9H5J0 574 aa19.92■□□□□ 0.78
SNRNP35-204ENST00000527158 VPS72Q15906 364 aa19.91■□□□□ 0.78
SNRNP35-204ENST00000527158 UBE3BQ7Z3V4 1068 aa19.91■□□□□ 0.78
SNRNP35-204ENST00000527158 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
SNRNP35-204ENST00000527158 CWC25Q9NXE8 425 aaPredicted RBP19.91■□□□□ 0.78
SNRNP35-204ENST00000527158 AOX1Q06278 1338 aa19.91■□□□□ 0.78
SNRNP35-204ENST00000527158 A0A0G2JS52 829 aa19.9■□□□□ 0.78
SNRNP35-204ENST00000527158 KIF6Q6ZMV9 814 aa19.9■□□□□ 0.78
SNRNP35-204ENST00000527158 BECN1Q14457 450 aa19.9■□□□□ 0.78
SNRNP35-204ENST00000527158 NFKBIBQ15653 356 aa19.9■□□□□ 0.78
SNRNP35-204ENST00000527158 COL15A1P39059 1388 aa19.89■□□□□ 0.78
SNRNP35-204ENST00000527158 G3BP1Q13283 466 aaKnown RBP eCLIP19.89■□□□□ 0.77
SNRNP35-204ENST00000527158 CLASRPQ8N2M8 674 aaKnown RBP19.89■□□□□ 0.77
SNRNP35-204ENST00000527158 FNBP4Q8N3X1 1017 aaPredicted RBP19.89■□□□□ 0.77
SNRNP35-204ENST00000527158 CCDC191Q8NCU4 936 aa19.89■□□□□ 0.77
SNRNP35-204ENST00000527158 BCL9LQ86UU0 1499 aa19.89■□□□□ 0.77
SNRNP35-204ENST00000527158 CYP19A1P11511 503 aaPredicted RBP19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 FAM98CQ17RN3 349 aaKnown RBP19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 NUTM1Q86Y26 1132 aa19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 ACSBG1Q96GR2 724 aa19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 PA2G4Q9UQ80 394 aaKnown RBP19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 H7C1W4 665 aa19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 TSHZ3Q63HK5 1081 aa19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 JARID2Q92833 1246 aaPredicted RBP19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 SLC4A9Q96Q91 983 aa19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 KAT6BQ8WYB5 2073 aa19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 AFDNP55196 1824 aaKnown RBP19.88■□□□□ 0.77
SNRNP35-204ENST00000527158 DOT1LQ8TEK3 1739 aa19.87■□□□□ 0.77
SNRNP35-204ENST00000527158 RBM25P49756 843 aaKnown RBP19.87■□□□□ 0.77
SNRNP35-204ENST00000527158 EPHA10Q5JZY3 1008 aa19.87■□□□□ 0.77
SNRNP35-204ENST00000527158 ARXQ96QS3 562 aa19.87■□□□□ 0.77
SNRNP35-204ENST00000527158 CASP7P55210 303 aa19.86■□□□□ 0.77
SNRNP35-204ENST00000527158 TCIRG1Q13488 830 aa19.86■□□□□ 0.77
SNRNP35-204ENST00000527158 RABL6Q3YEC7 729 aaPredicted RBP19.86■□□□□ 0.77
SNRNP35-204ENST00000527158 NUP188Q5SRE5 1749 aa19.86■□□□□ 0.77
SNRNP35-204ENST00000527158 SLC4A3P48751 1232 aa19.85■□□□□ 0.77
SNRNP35-204ENST00000527158 USP21Q9UK80 565 aa19.85■□□□□ 0.77
SNRNP35-204ENST00000527158 TRIM6-TRIM34B2RNG4 842 aa19.85■□□□□ 0.77
SNRNP35-204ENST00000527158 GSE1Q14687 1217 aa19.85■□□□□ 0.77
SNRNP35-204ENST00000527158 ISCA1Q9BUE6 129 aa19.84■□□□□ 0.77
SNRNP35-204ENST00000527158 IFIT2P09913 472 aaKnown RBP19.84■□□□□ 0.77
SNRNP35-204ENST00000527158 RILPL2Q969X0 211 aa19.84■□□□□ 0.77
SNRNP35-204ENST00000527158 MAP3K15Q6ZN16 1313 aa19.83■□□□□ 0.77
SNRNP35-204ENST00000527158 TRIM28Q13263 835 aaKnown RBP19.83■□□□□ 0.77
SNRNP35-204ENST00000527158 GPATCH3Q96I76 525 aa19.83■□□□□ 0.77
SNRNP35-204ENST00000527158 COPRSQ9NQ92 184 aa19.83■□□□□ 0.77
SNRNP35-204ENST00000527158 TTC41PQ6P2S7 1318 aa19.83■□□□□ 0.76
SNRNP35-204ENST00000527158 MEX3CQ5U5Q3 659 aaKnown RBP19.83■□□□□ 0.76
SNRNP35-204ENST00000527158 SMARCC1Q92922 1105 aaPredicted RBP19.83■□□□□ 0.76
SNRNP35-204ENST00000527158 SIL1Q9H173 461 aa19.83■□□□□ 0.76
SNRNP35-204ENST00000527158 ZBTB1Q9Y2K1 713 aa19.83■□□□□ 0.76
SNRNP35-204ENST00000527158 ATP6V1AP38606 617 aa19.82■□□□□ 0.76
SNRNP35-204ENST00000527158 IL6STP40189 918 aaPredicted RBP19.82■□□□□ 0.76
SNRNP35-204ENST00000527158 ERC2O15083 957 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms