RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 SEPT12Q8IYM1 358 aa25.62■■□□□ 1.69
SMCO4-203ENST00000526869 LRRFIP2Q9Y608 721 aaKnown RBP25.62■■□□□ 1.69
SMCO4-203ENST00000526869 NEURL1BA8MQ27 555 aa25.61■■□□□ 1.69
SMCO4-203ENST00000526869 IGKV5-2P06315 115 aa25.61■■□□□ 1.69
SMCO4-203ENST00000526869 ATP8B2P98198 1209 aa25.61■■□□□ 1.69
SMCO4-203ENST00000526869 LOC102724428A0A0B4J2F2 783 aa25.6■■□□□ 1.69
SMCO4-203ENST00000526869 GRM8O00222 908 aa25.6■■□□□ 1.69
SMCO4-203ENST00000526869 KCNQ2O43526 872 aa25.6■■□□□ 1.69
SMCO4-203ENST00000526869 SIK1P57059 783 aa25.6■■□□□ 1.69
SMCO4-203ENST00000526869 ZNF772Q68DY9 489 aaPredicted RBP25.6■■□□□ 1.69
SMCO4-203ENST00000526869 SKAP1Q86WV1 359 aa25.6■■□□□ 1.69
SMCO4-203ENST00000526869 MYD88Q99836 296 aa25.6■■□□□ 1.69
SMCO4-203ENST00000526869 C9orf78Q9NZ63 289 aaPredicted RBP25.6■■□□□ 1.69
SMCO4-203ENST00000526869 BTAF1O14981 1849 aa25.59■■□□□ 1.69
SMCO4-203ENST00000526869 CWF19L2Q2TBE0 894 aaKnown RBP25.59■■□□□ 1.69
SMCO4-203ENST00000526869 TTLL7Q6ZT98 887 aa25.59■■□□□ 1.69
SMCO4-203ENST00000526869 COL5A3P25940 1745 aaPredicted RBP25.59■■□□□ 1.69
SMCO4-203ENST00000526869 AFDNP55196 1824 aaKnown RBP25.58■■□□□ 1.69
SMCO4-203ENST00000526869 SBF2Q86WG5 1849 aa25.58■■□□□ 1.69
SMCO4-203ENST00000526869 NBPF7P0C2Y1 421 aaPredicted RBP25.58■■□□□ 1.69
SMCO4-203ENST00000526869 COL15A1P39059 1388 aa25.57■■□□□ 1.68
SMCO4-203ENST00000526869 IL6STP40189 918 aaPredicted RBP25.57■■□□□ 1.68
SMCO4-203ENST00000526869 RGS3P49796 1198 aa25.57■■□□□ 1.68
SMCO4-203ENST00000526869 MTX1Q13505 466 aa25.57■■□□□ 1.68
SMCO4-203ENST00000526869 GCKRQ14397 625 aa25.57■■□□□ 1.68
SMCO4-203ENST00000526869 KIF6Q6ZMV9 814 aa25.57■■□□□ 1.68
SMCO4-203ENST00000526869 CHD1LQ86WJ1 897 aa25.57■■□□□ 1.68
SMCO4-203ENST00000526869 ATP6V1AP38606 617 aa25.56■■□□□ 1.68
SMCO4-203ENST00000526869 SSH3Q8TE77 659 aa25.55■■□□□ 1.68
SMCO4-203ENST00000526869 CCDC87Q9NVE4 849 aa25.55■■□□□ 1.68
SMCO4-203ENST00000526869 ZBTB1Q9Y2K1 713 aa25.54■■□□□ 1.68
SMCO4-203ENST00000526869 RBM6P78332 1123 aaKnown RBP25.53■■□□□ 1.68
SMCO4-203ENST00000526869 POLA2Q14181 598 aa25.53■■□□□ 1.68
SMCO4-203ENST00000526869 ANKRD45Q5TZF3 282 aa25.53■■□□□ 1.68
SMCO4-203ENST00000526869 MAP3K15Q6ZN16 1313 aa25.53■■□□□ 1.68
SMCO4-203ENST00000526869 PDE4AP27815 886 aa25.52■■□□□ 1.68
SMCO4-203ENST00000526869 TRIM28Q13263 835 aaKnown RBP25.52■■□□□ 1.68
SMCO4-203ENST00000526869 ITPK1Q13572 414 aa25.52■■□□□ 1.68
SMCO4-203ENST00000526869 INTS5Q6P9B9 1019 aaKnown RBP25.52■■□□□ 1.68
SMCO4-203ENST00000526869 PNMA6EA0A0J9YXQ4 647 aa25.51■■□□□ 1.67
SMCO4-203ENST00000526869 CRKLP46109 303 aaKnown RBP25.51■■□□□ 1.67
SMCO4-203ENST00000526869 CCDC191Q8NCU4 936 aa25.51■■□□□ 1.67
SMCO4-203ENST00000526869 ZBTB3Q9H5J0 574 aa25.51■■□□□ 1.67
SMCO4-203ENST00000526869 LY75O60449 1722 aa25.51■■□□□ 1.67
SMCO4-203ENST00000526869 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
SMCO4-203ENST00000526869 ERVV-1B6SEH8 477 aa25.5■■□□□ 1.67
SMCO4-203ENST00000526869 EIF5P55010 431 aaKnown RBP25.5■■□□□ 1.67
SMCO4-203ENST00000526869 TCIRG1Q13488 830 aa25.5■■□□□ 1.67
SMCO4-203ENST00000526869 HSP90AB3PQ58FF7 597 aa25.5■■□□□ 1.67
SMCO4-203ENST00000526869 ANKRD36CQ5JPF3 1778 aa25.5■■□□□ 1.67
SMCO4-203ENST00000526869 PPP1R42Q7Z4L9 355 aa25.5■■□□□ 1.67
SMCO4-203ENST00000526869 ISCA1Q9BUE6 129 aa25.5■■□□□ 1.67
SMCO4-203ENST00000526869 CWC25Q9NXE8 425 aaPredicted RBP25.5■■□□□ 1.67
SMCO4-203ENST00000526869 LNPKQ9C0E8 428 aa25.49■■□□□ 1.67
SMCO4-203ENST00000526869 ZBTB47Q9UFB7 747 aaPredicted RBP25.49■■□□□ 1.67
SMCO4-203ENST00000526869 CNTNAP4Q9C0A0 1308 aa25.48■■□□□ 1.67
SMCO4-203ENST00000526869 GIGYF2Q6Y7W6 1299 aaKnown RBP25.48■■□□□ 1.67
SMCO4-203ENST00000526869 FAM196AQ6ZSG2 479 aa25.48■■□□□ 1.67
SMCO4-203ENST00000526869 KRT27Q7Z3Y8 459 aa25.48■■□□□ 1.67
SMCO4-203ENST00000526869 NPM2Q86SE8 214 aaKnown RBP25.48■■□□□ 1.67
SMCO4-203ENST00000526869 SUCLG2Q96I99 432 aa25.48■■□□□ 1.67
SMCO4-203ENST00000526869 BCL11BQ9C0K0 894 aaPredicted RBP25.48■■□□□ 1.67
SMCO4-203ENST00000526869 ATP5J2-PTCD1G3V325 749 aa25.47■■□□□ 1.67
SMCO4-203ENST00000526869 H7C1W4 665 aa25.47■■□□□ 1.67
SMCO4-203ENST00000526869 MYH14Q7Z406 1995 aaKnown RBP25.46■■□□□ 1.67
SMCO4-203ENST00000526869 SRGAP3O43295 1099 aa25.46■■□□□ 1.67
SMCO4-203ENST00000526869 CASP7P55210 303 aa25.46■■□□□ 1.67
SMCO4-203ENST00000526869 FAM161AQ3B820 660 aa25.46■■□□□ 1.67
SMCO4-203ENST00000526869 KAZALD1Q96I82 304 aa25.46■■□□□ 1.67
SMCO4-203ENST00000526869 BACH2Q9BYV9 841 aa25.46■■□□□ 1.67
SMCO4-203ENST00000526869 ZNF330Q9Y3S2 320 aaPredicted RBP25.46■■□□□ 1.67
SMCO4-203ENST00000526869 A0A087WZG4 1122 aa25.45■■□□□ 1.66
SMCO4-203ENST00000526869 RAB11FIP3O75154 756 aa25.45■■□□□ 1.66
SMCO4-203ENST00000526869 HSP90AB4PQ58FF6 505 aa25.45■■□□□ 1.66
SMCO4-203ENST00000526869 FAM182BQ5T319 152 aa25.45■■□□□ 1.66
SMCO4-203ENST00000526869 RC3H1Q5TC82 1133 aaKnown RBP25.45■■□□□ 1.66
SMCO4-203ENST00000526869 PTF1AQ7RTS3 328 aa25.45■■□□□ 1.66
SMCO4-203ENST00000526869 DZIP3Q86Y13 1208 aaKnown RBP25.45■■□□□ 1.66
SMCO4-203ENST00000526869 BICC1Q9H694 974 aaKnown RBP25.44■■□□□ 1.66
SMCO4-203ENST00000526869 NOP58Q9Y2X3 529 aaKnown RBP25.44■■□□□ 1.66
SMCO4-203ENST00000526869 RGL2O15211 777 aa25.43■■□□□ 1.66
SMCO4-203ENST00000526869 RABL6Q3YEC7 729 aaPredicted RBP25.43■■□□□ 1.66
SMCO4-203ENST00000526869 UBE3BQ7Z3V4 1068 aa25.43■■□□□ 1.66
SMCO4-203ENST00000526869 LINC00116Q8NCU8 138 aa25.43■■□□□ 1.66
SMCO4-203ENST00000526869 NUP98P52948 1817 aa25.42■■□□□ 1.66
SMCO4-203ENST00000526869 EXOC6BQ9Y2D4 811 aa25.42■■□□□ 1.66
SMCO4-203ENST00000526869 LRRCC1Q9C099 1032 aa25.41■■□□□ 1.66
SMCO4-203ENST00000526869 BCORQ6W2J9 1755 aa25.41■■□□□ 1.66
SMCO4-203ENST00000526869 TAF1LQ8IZX4 1826 aa25.4■■□□□ 1.66
SMCO4-203ENST00000526869 PCCAP05165 728 aaPredicted RBP25.39■■□□□ 1.66
SMCO4-203ENST00000526869 C8orf34Q49A92 452 aa25.39■■□□□ 1.66
SMCO4-203ENST00000526869 CCNL1Q9UK58 526 aaPredicted RBP25.39■■□□□ 1.66
SMCO4-203ENST00000526869 SURF6O75683 361 aaKnown RBP25.38■■□□□ 1.65
SMCO4-203ENST00000526869 HLFQ16534 295 aa25.38■■□□□ 1.65
SMCO4-203ENST00000526869 RBM19Q9Y4C8 960 aaKnown RBP25.38■■□□□ 1.65
SMCO4-203ENST00000526869 RXRBP28702 533 aa25.37■■□□□ 1.65
SMCO4-203ENST00000526869 BMP2KLQ5H9B9 411 aa25.37■■□□□ 1.65
SMCO4-203ENST00000526869 EPHA10Q5JZY3 1008 aa25.37■■□□□ 1.65
SMCO4-203ENST00000526869 NLRP10Q86W26 655 aa25.37■■□□□ 1.65
SMCO4-203ENST00000526869 ERC1Q8IUD2 1116 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms