RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 AOC2O75106 756 aa18.78■□□□□ 0.6
SSRP1-203ENST00000526696 SLC39A6Q13433 755 aa18.78■□□□□ 0.6
SSRP1-203ENST00000526696 C1orf141Q5JVX7 400 aa18.77■□□□□ 0.6
SSRP1-203ENST00000526696 CST9Q5W186 159 aa18.77■□□□□ 0.6
SSRP1-203ENST00000526696 PAXIP1Q6ZW49 1069 aaPredicted RBP18.77■□□□□ 0.6
SSRP1-203ENST00000526696 PNMA8AQ86V59 439 aaPredicted RBP18.77■□□□□ 0.6
SSRP1-203ENST00000526696 CNKSR1Q969H4 720 aa18.77■□□□□ 0.6
SSRP1-203ENST00000526696 SRGNP10124 158 aa18.76■□□□□ 0.59
SSRP1-203ENST00000526696 ECE1P42892 770 aa18.76■□□□□ 0.59
SSRP1-203ENST00000526696 DGKZQ13574 1117 aa18.76■□□□□ 0.59
SSRP1-203ENST00000526696 STYK1Q6J9G0 422 aa18.76■□□□□ 0.59
SSRP1-203ENST00000526696 ZNF277Q9NRM2 450 aaPredicted RBP18.76■□□□□ 0.59
SSRP1-203ENST00000526696 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
SSRP1-203ENST00000526696 EIF5P55010 431 aaKnown RBP18.75■□□□□ 0.59
SSRP1-203ENST00000526696 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
SSRP1-203ENST00000526696 SCN7AQ01118 1682 aa18.75■□□□□ 0.59
SSRP1-203ENST00000526696 SOGA3Q5TF21 947 aa18.74■□□□□ 0.59
SSRP1-203ENST00000526696 SLC52A2Q9HAB3 445 aa18.74■□□□□ 0.59
SSRP1-203ENST00000526696 FZD9O00144 591 aa18.73■□□□□ 0.59
SSRP1-203ENST00000526696 TRAF5O00463 557 aa18.73■□□□□ 0.59
SSRP1-203ENST00000526696 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
SSRP1-203ENST00000526696 MASTLQ96GX5 879 aa18.73■□□□□ 0.59
SSRP1-203ENST00000526696 LGR6Q9HBX8 967 aa18.73■□□□□ 0.59
SSRP1-203ENST00000526696 TLL2Q9Y6L7 1015 aa18.73■□□□□ 0.59
SSRP1-203ENST00000526696 MRC1P22897 1456 aa18.72■□□□□ 0.59
SSRP1-203ENST00000526696 MAP2K2P36507 400 aa18.72■□□□□ 0.59
SSRP1-203ENST00000526696 SOX10P56693 466 aa18.72■□□□□ 0.59
SSRP1-203ENST00000526696 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
SSRP1-203ENST00000526696 PRPF38BQ5VTL8 546 aaKnown RBP18.72■□□□□ 0.59
SSRP1-203ENST00000526696 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
SSRP1-203ENST00000526696 UBR2Q8IWV8 1755 aa18.7■□□□□ 0.58
SSRP1-203ENST00000526696 COL4A5P29400 1685 aa18.69■□□□□ 0.58
SSRP1-203ENST00000526696 CA12O43570 354 aa18.69■□□□□ 0.58
SSRP1-203ENST00000526696 GPC2Q8N158 579 aa18.69■□□□□ 0.58
SSRP1-203ENST00000526696 CNBD1Q8NA66 436 aa18.69■□□□□ 0.58
SSRP1-203ENST00000526696 TBC1D2BQ9UPU7 963 aa18.69■□□□□ 0.58
SSRP1-203ENST00000526696 VSIG10Q8N0Z9 540 aa18.68■□□□□ 0.58
SSRP1-203ENST00000526696 A0A087WZG4 1122 aa18.67■□□□□ 0.58
SSRP1-203ENST00000526696 IARSP41252 1262 aaKnown RBP18.67■□□□□ 0.58
SSRP1-203ENST00000526696 EPS15P42566 896 aa18.67■□□□□ 0.58
SSRP1-203ENST00000526696 BRPF1P55201 1214 aaPredicted RBP18.66■□□□□ 0.58
SSRP1-203ENST00000526696 SULT6B1Q6IMI4 303 aa18.66■□□□□ 0.58
SSRP1-203ENST00000526696 SAPCD2Q86UD0 394 aa18.66■□□□□ 0.58
SSRP1-203ENST00000526696 ZIC5Q96T25 663 aa18.66■□□□□ 0.58
SSRP1-203ENST00000526696 SNED1Q8TER0 1413 aa18.66■□□□□ 0.58
SSRP1-203ENST00000526696 RNMTO43148 476 aaKnown RBP18.65■□□□□ 0.58
SSRP1-203ENST00000526696 SCNN1DP51172 638 aa18.65■□□□□ 0.58
SSRP1-203ENST00000526696 AKAP4Q5JQC9 854 aa18.65■□□□□ 0.58
SSRP1-203ENST00000526696 CIAPIN1Q6FI81 312 aa18.65■□□□□ 0.58
SSRP1-203ENST00000526696 BCORQ6W2J9 1755 aa18.65■□□□□ 0.58
SSRP1-203ENST00000526696 CAMTA2O94983 1202 aa18.64■□□□□ 0.57
SSRP1-203ENST00000526696 ST5P78524 1137 aa18.64■□□□□ 0.57
SSRP1-203ENST00000526696 SYNE4Q8N205 404 aa18.64■□□□□ 0.57
SSRP1-203ENST00000526696 SETDB2Q96T68 719 aa18.64■□□□□ 0.57
SSRP1-203ENST00000526696 CDCA8Q53HL2 280 aa18.63■□□□□ 0.57
SSRP1-203ENST00000526696 GJA3Q9Y6H8 435 aa18.63■□□□□ 0.57
SSRP1-203ENST00000526696 KLRG2A4D1S0 409 aaPredicted RBP18.62■□□□□ 0.57
SSRP1-203ENST00000526696 NPR1P16066 1061 aa18.62■□□□□ 0.57
SSRP1-203ENST00000526696 RTKN2Q8IZC4 609 aa18.62■□□□□ 0.57
SSRP1-203ENST00000526696 ZNF330Q9Y3S2 320 aaPredicted RBP18.62■□□□□ 0.57
SSRP1-203ENST00000526696 NPHP1O15259 732 aa18.61■□□□□ 0.57
SSRP1-203ENST00000526696 STARD3NLO95772 234 aa18.61■□□□□ 0.57
SSRP1-203ENST00000526696 CELF2O95319 508 aaKnown RBP18.6■□□□□ 0.57
SSRP1-203ENST00000526696 LMOD1P29536 600 aaPredicted RBP18.6■□□□□ 0.57
SSRP1-203ENST00000526696 HHIPL1Q96JK4 782 aa18.6■□□□□ 0.57
SSRP1-203ENST00000526696 IL6STP40189 918 aaPredicted RBP18.59■□□□□ 0.57
SSRP1-203ENST00000526696 USP50Q70EL3 339 aaPredicted RBP18.59■□□□□ 0.57
SSRP1-203ENST00000526696 ZNF496Q96IT1 587 aaPredicted RBP18.58■□□□□ 0.56
SSRP1-203ENST00000526696 A1BGP04217 495 aa18.57■□□□□ 0.56
SSRP1-203ENST00000526696 IL13P35225 146 aa18.57■□□□□ 0.56
SSRP1-203ENST00000526696 EIF6P56537 245 aaKnown RBP18.57■□□□□ 0.56
SSRP1-203ENST00000526696 JDP2Q8WYK2 163 aa18.57■□□□□ 0.56
SSRP1-203ENST00000526696 PSMD1Q99460 953 aa18.57■□□□□ 0.56
SSRP1-203ENST00000526696 GLIS2Q9BZE0 524 aaPredicted RBP18.57■□□□□ 0.56
SSRP1-203ENST00000526696 SLC51AQ86UW1 340 aa18.56■□□□□ 0.56
SSRP1-203ENST00000526696 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
SSRP1-203ENST00000526696 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
SSRP1-203ENST00000526696 MTHFSDQ2M296 383 aaKnown RBP18.53■□□□□ 0.56
SSRP1-203ENST00000526696 DZIP3Q86Y13 1208 aaKnown RBP18.53■□□□□ 0.56
SSRP1-203ENST00000526696 NOGQ13253 232 aa18.52■□□□□ 0.56
SSRP1-203ENST00000526696 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
SSRP1-203ENST00000526696 GPRC5DQ9NZD1 345 aa18.52■□□□□ 0.56
SSRP1-203ENST00000526696 MKI67P46013 3256 aaKnown RBP18.52■□□□□ 0.55
SSRP1-203ENST00000526696 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
SSRP1-203ENST00000526696 ZNF408Q9H9D4 720 aa18.51■□□□□ 0.55
SSRP1-203ENST00000526696 ADARB2Q9NS39 739 aaKnown RBP18.51■□□□□ 0.55
SSRP1-203ENST00000526696 PGAP2Q9UHJ9 254 aa18.51■□□□□ 0.55
SSRP1-203ENST00000526696 FAM155AB1AL88 458 aaPredicted RBP18.5■□□□□ 0.55
SSRP1-203ENST00000526696 ZNF790Q6PG37 636 aa18.5■□□□□ 0.55
SSRP1-203ENST00000526696 DLK2Q6UY11 383 aa18.5■□□□□ 0.55
SSRP1-203ENST00000526696 TEX13AQ9BXU3 409 aaPredicted RBP18.5■□□□□ 0.55
SSRP1-203ENST00000526696 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
SSRP1-203ENST00000526696 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
SSRP1-203ENST00000526696 ALDH1B1P30837 517 aa18.49■□□□□ 0.55
SSRP1-203ENST00000526696 HIRAP54198 1017 aaPredicted RBP18.49■□□□□ 0.55
SSRP1-203ENST00000526696 HABP4Q5JVS0 413 aaKnown RBP18.49■□□□□ 0.55
SSRP1-203ENST00000526696 LARGE2Q8N3Y3 721 aa18.49■□□□□ 0.55
SSRP1-203ENST00000526696 SAGE1Q9NXZ1 904 aa18.49■□□□□ 0.55
SSRP1-203ENST00000526696 HMOX1P09601 288 aa18.48■□□□□ 0.55
SSRP1-203ENST00000526696 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms