RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CLASRPQ8N2M8 674 aaKnown RBP24.68■■□□□ 1.54
SMIM3-201ENST00000526627 LINS1Q8NG48 757 aa24.68■■□□□ 1.54
SMIM3-201ENST00000526627 TTC14Q96N46 770 aa24.68■■□□□ 1.54
SMIM3-201ENST00000526627 PPP1R9BQ96SB3 815 aa24.68■■□□□ 1.54
SMIM3-201ENST00000526627 CWC27Q6UX04 472 aaKnown RBP24.68■■□□□ 1.54
SMIM3-201ENST00000526627 SUCLG2Q96I99 432 aa24.68■■□□□ 1.54
SMIM3-201ENST00000526627 PROSER2Q86WR7 435 aaPredicted RBP24.67■■□□□ 1.54
SMIM3-201ENST00000526627 GRM8O00222 908 aa24.67■■□□□ 1.54
SMIM3-201ENST00000526627 ECHDC1Q9NTX5 307 aa24.67■■□□□ 1.54
SMIM3-201ENST00000526627 C5P01031 1676 aa24.66■■□□□ 1.54
SMIM3-201ENST00000526627 TMEM63CQ9P1W3 806 aa24.66■■□□□ 1.54
SMIM3-201ENST00000526627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.66■■□□□ 1.54
SMIM3-201ENST00000526627 KDM6AO15550 1401 aaPredicted RBP24.66■■□□□ 1.54
SMIM3-201ENST00000526627 ESPNB1AK53 854 aa24.66■■□□□ 1.54
SMIM3-201ENST00000526627 ZC3H6P61129 1189 aaKnown RBP24.66■■□□□ 1.54
SMIM3-201ENST00000526627 SPG7Q9UQ90 795 aa24.66■■□□□ 1.54
SMIM3-201ENST00000526627 SCN11AQ9UI33 1791 aa24.65■■□□□ 1.54
SMIM3-201ENST00000526627 CCDC173Q0VFZ6 552 aa24.65■■□□□ 1.54
SMIM3-201ENST00000526627 ERC1Q8IUD2 1116 aa24.65■■□□□ 1.54
SMIM3-201ENST00000526627 HDAC5Q9UQL6 1122 aa24.64■■□□□ 1.54
SMIM3-201ENST00000526627 SLC39A6Q13433 755 aa24.64■■□□□ 1.53
SMIM3-201ENST00000526627 RBSNQ9H1K0 784 aa24.64■■□□□ 1.53
SMIM3-201ENST00000526627 SASH1O94885 1247 aa24.63■■□□□ 1.53
SMIM3-201ENST00000526627 IGKV5-2P06315 115 aa24.63■■□□□ 1.53
SMIM3-201ENST00000526627 PRIM1P49642 420 aaKnown RBP24.63■■□□□ 1.53
SMIM3-201ENST00000526627 AIMP1Q12904 312 aaKnown RBP24.63■■□□□ 1.53
SMIM3-201ENST00000526627 ZNF790Q6PG37 636 aa24.63■■□□□ 1.53
SMIM3-201ENST00000526627 BICC1Q9H694 974 aaKnown RBP24.63■■□□□ 1.53
SMIM3-201ENST00000526627 C19orf44Q9H6X5 657 aa24.63■■□□□ 1.53
SMIM3-201ENST00000526627 SLC52A2Q9HAB3 445 aa24.63■■□□□ 1.53
SMIM3-201ENST00000526627 NPHP3Q7Z494 1330 aa24.63■■□□□ 1.53
SMIM3-201ENST00000526627 DDX58O95786 925 aaKnown RBP24.62■■□□□ 1.53
SMIM3-201ENST00000526627 KIAA1211Q6ZU35 1233 aa24.62■■□□□ 1.53
SMIM3-201ENST00000526627 RPAP1Q9BWH6 1393 aaPredicted RBP24.62■■□□□ 1.53
SMIM3-201ENST00000526627 IFIT2P09913 472 aaKnown RBP24.62■■□□□ 1.53
SMIM3-201ENST00000526627 AK2P54819 239 aa24.62■■□□□ 1.53
SMIM3-201ENST00000526627 PTH1RQ03431 593 aa24.62■■□□□ 1.53
SMIM3-201ENST00000526627 RUFY3Q7L099 469 aa24.62■■□□□ 1.53
SMIM3-201ENST00000526627 TRIM44Q96DX7 344 aaPredicted RBP24.62■■□□□ 1.53
SMIM3-201ENST00000526627 DIAPH3Q9NSV4 1193 aa24.62■■□□□ 1.53
SMIM3-201ENST00000526627 AACSQ86V21 672 aa24.61■■□□□ 1.53
SMIM3-201ENST00000526627 COL18A1P39060 1754 aa24.6■■□□□ 1.53
SMIM3-201ENST00000526627 MEGF6O75095 1541 aa24.6■■□□□ 1.53
SMIM3-201ENST00000526627 PHKG2P15735 406 aa24.6■■□□□ 1.53
SMIM3-201ENST00000526627 RAPGEF4Q8WZA2 1011 aa24.6■■□□□ 1.53
SMIM3-201ENST00000526627 KCNB2Q92953 911 aa24.6■■□□□ 1.53
SMIM3-201ENST00000526627 EAF2Q96CJ1 260 aaPredicted RBP24.6■■□□□ 1.53
SMIM3-201ENST00000526627 GPATCH3Q96I76 525 aa24.6■■□□□ 1.53
SMIM3-201ENST00000526627 MBD3O95983 291 aa24.6■■□□□ 1.53
SMIM3-201ENST00000526627 RUFY2Q8WXA3 655 aa24.6■■□□□ 1.53
SMIM3-201ENST00000526627 EVI5LQ96CN4 794 aa24.59■■□□□ 1.53
SMIM3-201ENST00000526627 WDR33Q9C0J8 1336 aaKnown RBP24.59■■□□□ 1.53
SMIM3-201ENST00000526627 NLRP2Q9NX02 1062 aa24.58■■□□□ 1.53
SMIM3-201ENST00000526627 LRSAM1Q6UWE0 723 aa24.58■■□□□ 1.53
SMIM3-201ENST00000526627 NFATC2IPQ8NCF5 419 aa24.58■■□□□ 1.53
SMIM3-201ENST00000526627 LIMCH1Q9UPQ0 1083 aa24.58■■□□□ 1.53
SMIM3-201ENST00000526627 NEURL1BA8MQ27 555 aa24.57■■□□□ 1.52
SMIM3-201ENST00000526627 CPA1P15085 419 aa24.57■■□□□ 1.52
SMIM3-201ENST00000526627 LARP1Q6PKG0 1096 aaKnown RBP24.57■■□□□ 1.52
SMIM3-201ENST00000526627 LRP10Q7Z4F1 713 aa24.57■■□□□ 1.52
SMIM3-201ENST00000526627 RIC3Q7Z5B4 369 aa24.57■■□□□ 1.52
SMIM3-201ENST00000526627 LARP6Q9BRS8 491 aaKnown RBP24.57■■□□□ 1.52
SMIM3-201ENST00000526627 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
SMIM3-201ENST00000526627 SYCE3A1L190 88 aa24.56■■□□□ 1.52
SMIM3-201ENST00000526627 G3BP1Q13283 466 aaKnown RBP eCLIP24.56■■□□□ 1.52
SMIM3-201ENST00000526627 XAGE3Q8WTP9 111 aa24.56■■□□□ 1.52
SMIM3-201ENST00000526627 MYL6BP14649 208 aa24.56■■□□□ 1.52
SMIM3-201ENST00000526627 TATP17735 454 aaPredicted RBP24.56■■□□□ 1.52
SMIM3-201ENST00000526627 CASTP20810 708 aaKnown RBP24.56■■□□□ 1.52
SMIM3-201ENST00000526627 ADCK5Q3MIX3 580 aa24.56■■□□□ 1.52
SMIM3-201ENST00000526627 ZNF496Q96IT1 587 aaPredicted RBP24.56■■□□□ 1.52
SMIM3-201ENST00000526627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.56■■□□□ 1.52
SMIM3-201ENST00000526627 TLR7Q9NYK1 1049 aaKnown RBP24.56■■□□□ 1.52
SMIM3-201ENST00000526627 ABCC6O95255 1503 aa24.55■■□□□ 1.52
SMIM3-201ENST00000526627 EPHA10Q5JZY3 1008 aa24.55■■□□□ 1.52
SMIM3-201ENST00000526627 CCDC8Q9H0W5 538 aaPredicted RBP24.55■■□□□ 1.52
SMIM3-201ENST00000526627 LARGE1O95461 756 aa24.55■■□□□ 1.52
SMIM3-201ENST00000526627 GCKRQ14397 625 aa24.55■■□□□ 1.52
SMIM3-201ENST00000526627 NECTIN1Q15223 517 aa24.55■■□□□ 1.52
SMIM3-201ENST00000526627 PRPF40BQ6NWY9 871 aaKnown RBP24.55■■□□□ 1.52
SMIM3-201ENST00000526627 COPS6Q7L5N1 327 aa24.55■■□□□ 1.52
SMIM3-201ENST00000526627 MRC1P22897 1456 aa24.55■■□□□ 1.52
SMIM3-201ENST00000526627 METTL22Q9BUU2 404 aaPredicted RBP24.54■■□□□ 1.52
SMIM3-201ENST00000526627 GADD45BO75293 160 aaPredicted RBP24.53■■□□□ 1.52
SMIM3-201ENST00000526627 FOXD4L6Q3SYB3 417 aaPredicted RBP24.53■■□□□ 1.52
SMIM3-201ENST00000526627 FOXD4L3Q6VB84 417 aaPredicted RBP24.53■■□□□ 1.52
SMIM3-201ENST00000526627 ANP32BQ92688 251 aaKnown RBP24.53■■□□□ 1.52
SMIM3-201ENST00000526627 TM6SF1Q9BZW5 370 aa24.53■■□□□ 1.52
SMIM3-201ENST00000526627 GDPD2Q9HCC8 539 aa24.53■■□□□ 1.52
SMIM3-201ENST00000526627 ZSWIM6Q9HCJ5 1215 aa24.53■■□□□ 1.52
SMIM3-201ENST00000526627 CCDC171Q6TFL3 1326 aa24.53■■□□□ 1.52
SMIM3-201ENST00000526627 TCHHQ07283 1943 aa24.53■■□□□ 1.52
SMIM3-201ENST00000526627 KLHDC4Q8TBB5 520 aa24.53■■□□□ 1.52
SMIM3-201ENST00000526627 FAM227BQ96M60 508 aa24.53■■□□□ 1.52
SMIM3-201ENST00000526627 SNRKQ9NRH2 765 aa24.53■■□□□ 1.52
SMIM3-201ENST00000526627 USP48Q86UV5 1035 aa24.52■■□□□ 1.52
SMIM3-201ENST00000526627 IFNL2Q8IZJ0 200 aa24.52■■□□□ 1.52
SMIM3-201ENST00000526627 PDLIM2Q96JY6 352 aa24.52■■□□□ 1.52
SMIM3-201ENST00000526627 MYD88Q99836 296 aa24.52■■□□□ 1.52
SMIM3-201ENST00000526627 SIL1Q9H173 461 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms