RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 PHACTR2O75167 634 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 ERCC3P19447 782 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 TRIM4Q9C037 500 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 VCXQ9H320 206 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 PLEKHH1Q9ULM0 1364 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 BLOC1S2Q6QNY1 142 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 SELENOSQ9BQE4 189 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 CTAGE9A4FU28 777 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 PSMC4P43686 418 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 MIER3Q7Z3K6 550 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 HDXQ7Z353 690 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 MICAL1Q8TDZ2 1067 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 CTAGE15A4D2H0 777 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 CTAGE8P0CG41 777 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 CTAGE6Q86UF2 777 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 CTAGE4Q8IX94 777 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 ZSCAN23Q3MJ62 389 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 CPLX3Q8WVH0 158 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 DDX12PQ92771 950 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 ZNF622Q969S3 477 aaKnown RBP eCLIP8.85□□□□□ -0.99
LRRK1-205ENST00000526457 JAKMIP1Q96N16 626 aaKnown RBP8.85□□□□□ -0.99
LRRK1-205ENST00000526457 FGFR1OPO95684 399 aaKnown RBP8.85□□□□□ -0.99
LRRK1-205ENST00000526457 DAPK1P53355 1430 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 GNAI1P63096 354 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 SETDB1Q15047 1291 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 LRRC43Q8N309 656 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 C1orf115Q9H7X2 142 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 DNAI1Q9UI46 699 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 TBC1D2BQ9UPU7 963 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 MAP7Q14244 749 aa8.85□□□□□ -0.99
LRRK1-205ENST00000526457 RBM27Q9P2N5 1060 aaKnown RBP8.85□□□□□ -0.99
LRRK1-205ENST00000526457 MKRN1Q9UHC7 482 aaKnown RBP8.85□□□□□ -0.99
LRRK1-205ENST00000526457 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 CAVIN2O95810 425 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 AIMP1Q12904 312 aaKnown RBP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 TMCO4Q5TGY1 634 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 AFAP1L1Q8TED9 768 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 TSNARE1Q96NA8 513 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 CEP131Q9UPN4 1083 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 PFDN1O60925 122 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 SH3BGRP55822 239 aaPredicted RBP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 IQCGQ9H095 443 aaKnown RBP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 SPATS2LQ9NUQ6 558 aaKnown RBP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 STMN1P16949 149 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 ZKSCAN5Q9Y2L8 839 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 CCDC170Q8IYT3 715 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 ADGBQ8N7X0 1667 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 XRCC6P12956 609 aaKnown RBP eCLIP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 PEX19P40855 299 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 NOP2P46087 812 aaKnown RBP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 MAP7D1Q3KQU3 841 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 PRR16Q569H4 304 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 PANK2Q9BZ23 570 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 SURF6O75683 361 aaKnown RBP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 CASTP20810 708 aaKnown RBP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 CTNNA2P26232 953 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 PIP4K2BP78356 416 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 CCDC110Q8TBZ0 833 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 RASAL2Q9UJF2 1139 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 SKILP12757 684 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 INTS8Q75QN2 995 aaKnown RBP8.84□□□□□ -0.99
LRRK1-205ENST00000526457 FERMT3Q86UX7 667 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 TTC5Q8N0Z6 440 aa8.84□□□□□ -0.99
LRRK1-205ENST00000526457 CCDC69A6NI79 296 aa8.84□□□□□ -1
LRRK1-205ENST00000526457 TUBB4BP68371 445 aa8.84□□□□□ -1
LRRK1-205ENST00000526457 CERS3Q8IU89 383 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 ZBTB9Q96C00 473 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 TDRD12Q587J7 1177 aaKnown RBP8.83□□□□□ -1
LRRK1-205ENST00000526457 SPTY2D1Q68D10 685 aaPredicted RBP8.83□□□□□ -1
LRRK1-205ENST00000526457 POLR1AO95602 1720 aaPredicted RBP8.83□□□□□ -1
LRRK1-205ENST00000526457 CCDC57Q2TAC2 916 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 TSG101Q99816 390 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.83□□□□□ -1
LRRK1-205ENST00000526457 CEP85LQ5SZL2 805 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 ZNF165P49910 485 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 CTCFLQ8NI51 663 aaPredicted RBP8.83□□□□□ -1
LRRK1-205ENST00000526457 ANKRD50Q9ULJ7 1429 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 TERF1P54274 439 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 SRCIN1Q9C0H9 1055 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 DDX19AQ9NUU7 478 aaKnown RBP8.83□□□□□ -1
LRRK1-205ENST00000526457 KIF14Q15058 1648 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 HS1BP3Q53T59 392 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 SEC62Q99442 399 aaKnown RBP8.83□□□□□ -1
LRRK1-205ENST00000526457 UBAC1Q9BSL1 405 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 NUF2Q9BZD4 464 aa8.83□□□□□ -1
LRRK1-205ENST00000526457 TRHP20396 242 aaPredicted RBP8.82□□□□□ -1
LRRK1-205ENST00000526457 GGT6Q6P531 493 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 NGDNQ8NEJ9 315 aaKnown RBP8.82□□□□□ -1
LRRK1-205ENST00000526457 TRIM7Q9C029 511 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 TSPYL4Q9UJ04 414 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 COMMD10Q9Y6G5 202 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 CETN3O15182 167 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 ZC4H2Q9NQZ6 224 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 MAP4K4O95819 1239 aaPredicted RBP8.82□□□□□ -1
LRRK1-205ENST00000526457 HCLS1P14317 486 aaPredicted RBP8.82□□□□□ -1
LRRK1-205ENST00000526457 COG3Q96JB2 828 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 MYH10P35580 1976 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 GNAI3P08754 354 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 FSIP1Q8NA03 581 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms