RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 TEX13AQ9BXU3 409 aaPredicted RBP22.52■■□□□ 1.2
CCS-204ENST00000526066 BCL2L12Q9HB09 334 aa22.52■■□□□ 1.2
CCS-204ENST00000526066 ZNF622Q969S3 477 aaKnown RBP eCLIP22.51■■□□□ 1.197e-11■□□□□ 9.8
CCS-204ENST00000526066 DLG5Q8TDM6 1919 aa22.51■■□□□ 1.19
CCS-204ENST00000526066 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
CCS-204ENST00000526066 WWC1Q8IX03 1113 aa22.5■■□□□ 1.19
CCS-204ENST00000526066 ZNF521Q96K83 1311 aa22.5■■□□□ 1.19
CCS-204ENST00000526066 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
CCS-204ENST00000526066 TNS4Q8IZW8 715 aa22.49■■□□□ 1.19
CCS-204ENST00000526066 IL17REQ8NFR9 667 aa22.49■■□□□ 1.19
CCS-204ENST00000526066 EIF5P55010 431 aaKnown RBP22.48■■□□□ 1.19
CCS-204ENST00000526066 BRIP1Q9BX63 1249 aa22.48■■□□□ 1.19
CCS-204ENST00000526066 SALL2Q9Y467 1007 aaPredicted RBP22.48■■□□□ 1.19
CCS-204ENST00000526066 ZBED9Q6R2W3 1325 aa22.48■■□□□ 1.19
CCS-204ENST00000526066 SCN7AQ01118 1682 aa22.48■■□□□ 1.19
CCS-204ENST00000526066 NFKBIEO00221 500 aa22.47■■□□□ 1.19
CCS-204ENST00000526066 CALD1Q05682 793 aaKnown RBP22.47■■□□□ 1.19
CCS-204ENST00000526066 ZNF219Q9P2Y4 722 aaPredicted RBP22.47■■□□□ 1.19
CCS-204ENST00000526066 HEG1Q9ULI3 1381 aa22.47■■□□□ 1.19
CCS-204ENST00000526066 CAPN15O75808 1086 aa22.46■■□□□ 1.19
CCS-204ENST00000526066 DCTN1Q14203 1278 aa22.46■■□□□ 1.19
CCS-204ENST00000526066 ERFEQ4G0M1 354 aa22.46■■□□□ 1.19
CCS-204ENST00000526066 TBC1D9BQ66K14 1250 aa22.46■■□□□ 1.19
CCS-204ENST00000526066 ZNF790Q6PG37 636 aa22.46■■□□□ 1.19
CCS-204ENST00000526066 MCM10Q7L590 875 aa22.46■■□□□ 1.19
CCS-204ENST00000526066 WDR63Q8IWG1 891 aa22.46■■□□□ 1.19
CCS-204ENST00000526066 C21orf2O43822 256 aa22.45■■□□□ 1.18
CCS-204ENST00000526066 IL6STP40189 918 aaPredicted RBP22.45■■□□□ 1.18
CCS-204ENST00000526066 PRELPP51888 382 aa22.45■■□□□ 1.18
CCS-204ENST00000526066 CNBD1Q8NA66 436 aa22.45■■□□□ 1.18
CCS-204ENST00000526066 ZNF496Q96IT1 587 aaPredicted RBP22.45■■□□□ 1.18
CCS-204ENST00000526066 FMNL2Q96PY5 1086 aa22.45■■□□□ 1.18
CCS-204ENST00000526066 SETDB2Q96T68 719 aa22.45■■□□□ 1.18
CCS-204ENST00000526066 TBC1D2BQ9UPU7 963 aa22.45■■□□□ 1.18
CCS-204ENST00000526066 ANKRD31Q8N7Z5 1873 aa22.45■■□□□ 1.18
CCS-204ENST00000526066 ST5P78524 1137 aa22.44■■□□□ 1.18
CCS-204ENST00000526066 IL16Q14005 1332 aa22.44■■□□□ 1.18
CCS-204ENST00000526066 DICER1Q9UPY3 1922 aaKnown RBP22.43■■□□□ 1.18
CCS-204ENST00000526066 SOGA3Q5TF21 947 aa22.43■■□□□ 1.18
CCS-204ENST00000526066 PRR5LQ6MZQ0 368 aa22.43■■□□□ 1.18
CCS-204ENST00000526066 CNKSR1Q969H4 720 aa22.43■■□□□ 1.18
CCS-204ENST00000526066 THUMPD2Q9BTF0 503 aaKnown RBP22.43■■□□□ 1.18
CCS-204ENST00000526066 TAOK3Q9H2K8 898 aa22.43■■□□□ 1.18
CCS-204ENST00000526066 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
CCS-204ENST00000526066 FER1L6Q2WGJ9 1857 aa22.42■■□□□ 1.18
CCS-204ENST00000526066 COL11A2P13942 1736 aaPredicted RBP22.42■■□□□ 1.18
CCS-204ENST00000526066 SIPA1L3O60292 1781 aaPredicted RBP22.41■■□□□ 1.18
CCS-204ENST00000526066 CACNA1SQ13698 1873 aa22.41■■□□□ 1.18
CCS-204ENST00000526066 LTBP3Q9NS15 1303 aa22.4■■□□□ 1.18
CCS-204ENST00000526066 HSPA1AP0DMV8 641 aaKnown RBP22.4■■□□□ 1.18
CCS-204ENST00000526066 HSPA1BP0DMV9 641 aaKnown RBP22.4■■□□□ 1.18
CCS-204ENST00000526066 CCDC24Q8N4L8 307 aa22.4■■□□□ 1.18
CCS-204ENST00000526066 BABAM1Q9NWV8 329 aa22.4■■□□□ 1.18
CCS-204ENST00000526066 GOLGA2Q08379 1002 aa22.39■■□□□ 1.17
CCS-204ENST00000526066 TAF7Q15545 349 aaPredicted RBP22.39■■□□□ 1.17
CCS-204ENST00000526066 STYK1Q6J9G0 422 aa22.39■■□□□ 1.17
CCS-204ENST00000526066 IFT57Q9NWB7 429 aa22.39■■□□□ 1.17
CCS-204ENST00000526066 BTBD11A6QL63 1104 aa22.38■■□□□ 1.17
CCS-204ENST00000526066 ZNF853P0CG23 659 aa22.38■■□□□ 1.17
CCS-204ENST00000526066 DZIP3Q86Y13 1208 aaKnown RBP22.38■■□□□ 1.17
CCS-204ENST00000526066 CFAP44Q96MT7 982 aa22.38■■□□□ 1.17
CCS-204ENST00000526066 ZNF652Q9Y2D9 606 aa22.38■■□□□ 1.17
CCS-204ENST00000526066 A1BGP04217 495 aa22.37■■□□□ 1.17
CCS-204ENST00000526066 GNAI1P63096 354 aa22.37■■□□□ 1.17
CCS-204ENST00000526066 CHADLQ6NUI6 762 aa22.37■■□□□ 1.17
CCS-204ENST00000526066 PRPF40BQ6NWY9 871 aaKnown RBP22.37■■□□□ 1.17
CCS-204ENST00000526066 MASTLQ96GX5 879 aa22.37■■□□□ 1.17
CCS-204ENST00000526066 BCORQ6W2J9 1755 aa22.36■■□□□ 1.17
CCS-204ENST00000526066 IQCA1LA6NCM1 817 aa22.36■■□□□ 1.17
CCS-204ENST00000526066 CHL1O00533 1208 aa22.36■■□□□ 1.17
CCS-204ENST00000526066 ARFGEF2Q9Y6D5 1785 aa22.35■■□□□ 1.17
CCS-204ENST00000526066 POTECB2RU33 542 aa22.35■■□□□ 1.17
CCS-204ENST00000526066 E9PSI1 815 aa22.35■■□□□ 1.17
CCS-204ENST00000526066 CAMTA2O94983 1202 aa22.35■■□□□ 1.17
CCS-204ENST00000526066 NBPF5PQ86XG9 351 aaPredicted RBP22.35■■□□□ 1.17
CCS-204ENST00000526066 PCNTO95613 3336 aa22.35■■□□□ 1.17
CCS-204ENST00000526066 SLX4Q8IY92 1834 aa22.34■■□□□ 1.17
CCS-204ENST00000526066 SRGNP10124 158 aa22.34■■□□□ 1.17
CCS-204ENST00000526066 SLFN5Q08AF3 891 aa22.34■■□□□ 1.17
CCS-204ENST00000526066 MYH16Q9H6N6 1097 aa22.34■■□□□ 1.17
CCS-204ENST00000526066 CREBZFQ9NS37 354 aa22.34■■□□□ 1.17
CCS-204ENST00000526066 SPINK5Q9NQ38 1064 aaPredicted RBP22.33■■□□□ 1.17
CCS-204ENST00000526066 DDNO94850 711 aaPredicted RBP22.32■■□□□ 1.16
CCS-204ENST00000526066 CCDC93Q567U6 631 aa22.32■■□□□ 1.16
CCS-204ENST00000526066 CLEC4GQ6UXB4 293 aa22.32■■□□□ 1.16
CCS-204ENST00000526066 TRMT2AQ8IZ69 625 aaKnown RBP22.32■■□□□ 1.16
CCS-204ENST00000526066 CDCA7LQ96GN5 454 aa22.31■■□□□ 1.16
CCS-204ENST00000526066 MKRN1Q9UHC7 482 aaKnown RBP22.31■■□□□ 1.16
CCS-204ENST00000526066 TSPYL4Q9UJ04 414 aa22.31■■□□□ 1.16
CCS-204ENST00000526066 LAS1LQ9Y4W2 734 aaKnown RBP22.31■■□□□ 1.16
CCS-204ENST00000526066 SNRPA1P09661 255 aaKnown RBP22.3■■□□□ 1.16
CCS-204ENST00000526066 NPR1P16066 1061 aa22.3■■□□□ 1.16
CCS-204ENST00000526066 MBIPQ9NS73 344 aa22.3■■□□□ 1.16
CCS-204ENST00000526066 SCN4AP35499 1836 aa22.29■■□□□ 1.16
CCS-204ENST00000526066 TPTE2Q6XPS3 522 aa22.29■■□□□ 1.16
CCS-204ENST00000526066 FANCIQ9NVI1 1328 aa22.29■■□□□ 1.16
CCS-204ENST00000526066 KCNQ3O43525 872 aa22.28■■□□□ 1.16
CCS-204ENST00000526066 LDHDQ86WU2 507 aa22.28■■□□□ 1.16
CCS-204ENST00000526066 MIS18AQ9NYP9 233 aa22.28■■□□□ 1.16
CCS-204ENST00000526066 USP16Q9Y5T5 823 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms