RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-215	ENST00000525948	CCDC24	Q8N4L8	307 aa		14	□□□□□ -0.17
PUM1-215	ENST00000525948	AIDA	Q96BJ3	306 aa		14	□□□□□ -0.17
PUM1-215	ENST00000525948	TAOK3	Q9H2K8	898 aa		14	□□□□□ -0.17
PUM1-215	ENST00000525948	SIPA1L3	O60292	1781 aa	Predicted RBP	14	□□□□□ -0.17
PUM1-215	ENST00000525948	CANX	P27824	592 aa	Known RBP	13.99	□□□□□ -0.17
PUM1-215	ENST00000525948	FAM161A	Q3B820	660 aa		13.99	□□□□□ -0.17
PUM1-215	ENST00000525948	TBC1D9B	Q66K14	1250 aa		13.99	□□□□□ -0.17
PUM1-215	ENST00000525948	PRR5L	Q6MZQ0	368 aa		13.99	□□□□□ -0.17
PUM1-215	ENST00000525948	RNMT	O43148	476 aa	Known RBP	13.98	□□□□□ -0.17
PUM1-215	ENST00000525948	LBX1	P52954	281 aa		13.98	□□□□□ -0.17
PUM1-215	ENST00000525948	LDHD	Q86WU2	507 aa		13.98	□□□□□ -0.17
PUM1-215	ENST00000525948	IL13	P35225	146 aa		13.97	□□□□□ -0.17
PUM1-215	ENST00000525948	PDE6B	P35913	854 aa		13.97	□□□□□ -0.17
PUM1-215	ENST00000525948	BRIP1	Q9BX63	1249 aa		13.97	□□□□□ -0.17
PUM1-215	ENST00000525948	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.97	□□□□□ -0.17
PUM1-215	ENST00000525948	WBP1L	Q9NX94	342 aa		13.97	□□□□□ -0.17
PUM1-215	ENST00000525948	IQCA1L	A6NCM1	817 aa		13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	TMEM88B	A6NKF7	163 aa		13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	HSPA8	P11142	646 aa	Known RBP	13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	EIF5	P55010	431 aa	Known RBP	13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	PRPF40B	Q6NWY9	871 aa	Known RBP	13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	VSIG10	Q8N0Z9	540 aa		13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	ABHD8	Q96I13	439 aa		13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	PDZRN3	Q9UPQ7	1066 aa		13.96	□□□□□ -0.17
PUM1-215	ENST00000525948	ITGBL1	O95965	494 aa	Predicted RBP	13.95	□□□□□ -0.18
PUM1-215	ENST00000525948	PRKAR2A	P13861	404 aa	Known RBP	13.95	□□□□□ -0.18
PUM1-215	ENST00000525948	ZNF541	Q9H0D2	1346 aa		13.94	□□□□□ -0.18
PUM1-215	ENST00000525948	EAPP	Q56P03	285 aa	Predicted RBP	13.94	□□□□□ -0.18
PUM1-215	ENST00000525948	MORC1	Q86VD1	984 aa		13.94	□□□□□ -0.18
PUM1-215	ENST00000525948	LTBP1	Q14766	1721 aa		13.93	□□□□□ -0.18
PUM1-215	ENST00000525948		A0A087WZG4	1122 aa		13.93	□□□□□ -0.18
PUM1-215	ENST00000525948	STYK1	Q6J9G0	422 aa		13.93	□□□□□ -0.18
PUM1-215	ENST00000525948	CNBD1	Q8NA66	436 aa		13.93	□□□□□ -0.18
PUM1-215	ENST00000525948	CNKSR1	Q969H4	720 aa		13.93	□□□□□ -0.18
PUM1-215	ENST00000525948	PANK3	Q9H999	370 aa		13.93	□□□□□ -0.18
PUM1-215	ENST00000525948	TBC1D2B	Q9UPU7	963 aa		13.93	□□□□□ -0.18
PUM1-215	ENST00000525948	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.93	□□□□□ -0.18
PUM1-215	ENST00000525948	TRPM7	Q96QT4	1865 aa		13.93	□□□□□ -0.18
PUM1-215	ENST00000525948	RASSF10	A6NK89	507 aa		13.92	□□□□□ -0.18
PUM1-215	ENST00000525948	HMOX1	P09601	288 aa		13.92	□□□□□ -0.18
PUM1-215	ENST00000525948	SRGN	P10124	158 aa		13.92	□□□□□ -0.18
PUM1-215	ENST00000525948	STARD3NL	O95772	234 aa		13.91	□□□□□ -0.18
PUM1-215	ENST00000525948	MTHFSD	Q2M296	383 aa	Known RBP	13.91	□□□□□ -0.18
PUM1-215	ENST00000525948	SOGA3	Q5TF21	947 aa		13.91	□□□□□ -0.18
PUM1-215	ENST00000525948	TTC5	Q8N0Z6	440 aa		13.91	□□□□□ -0.18
PUM1-215	ENST00000525948	MASTL	Q96GX5	879 aa		13.91	□□□□□ -0.18
PUM1-215	ENST00000525948	ZNF496	Q96IT1	587 aa	Predicted RBP	13.91	□□□□□ -0.18
PUM1-215	ENST00000525948	HEG1	Q9ULI3	1381 aa		13.91	□□□□□ -0.18
PUM1-215	ENST00000525948	RNF123	Q5XPI4	1314 aa		13.9	□□□□□ -0.18
PUM1-215	ENST00000525948	CAMTA2	O94983	1202 aa		13.9	□□□□□ -0.18
PUM1-215	ENST00000525948	EPHX2	P34913	555 aa		13.9	□□□□□ -0.18
PUM1-215	ENST00000525948	ST5	P78524	1137 aa		13.9	□□□□□ -0.18
PUM1-215	ENST00000525948	DEFB115	Q30KQ5	88 aa		13.9	□□□□□ -0.18
PUM1-215	ENST00000525948	MAP1S	Q66K74	1059 aa	Predicted RBP	13.9	□□□□□ -0.18
PUM1-215	ENST00000525948	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.9	□□□□□ -0.18
PUM1-215	ENST00000525948	HACL1	Q9UJ83	578 aa		13.9	□□□□□ -0.18
PUM1-215	ENST00000525948	WDR33	Q9C0J8	1336 aa	Known RBP	13.9	□□□□□ -0.19
PUM1-215	ENST00000525948	COL4A5	P29400	1685 aa		13.89	□□□□□ -0.19
PUM1-215	ENST00000525948	NPHP1	O15259	732 aa		13.89	□□□□□ -0.19
PUM1-215	ENST00000525948	IL6ST	P40189	918 aa	Predicted RBP	13.89	□□□□□ -0.19
PUM1-215	ENST00000525948	CCDC93	Q567U6	631 aa		13.89	□□□□□ -0.19
PUM1-215	ENST00000525948	OLFM4	Q6UX06	510 aa		13.89	□□□□□ -0.19
PUM1-215	ENST00000525948	C7orf43	Q8WVR3	580 aa		13.89	□□□□□ -0.19
PUM1-215	ENST00000525948	SETDB2	Q96T68	719 aa		13.89	□□□□□ -0.19
PUM1-215	ENST00000525948	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
PUM1-215	ENST00000525948	CNTROB	Q8N137	903 aa		13.88	□□□□□ -0.19
PUM1-215	ENST00000525948	ABT1	Q9ULW3	272 aa	Known RBP	13.88	□□□□□ -0.19
PUM1-215	ENST00000525948	SNED1	Q8TER0	1413 aa		13.88	□□□□□ -0.19
PUM1-215	ENST00000525948	MAP2K1	Q02750	393 aa	Predicted RBP	13.87	□□□□□ -0.19
PUM1-215	ENST00000525948	MLLT1	Q03111	559 aa	Predicted RBP	13.87	□□□□□ -0.19
PUM1-215	ENST00000525948	ZNF790	Q6PG37	636 aa		13.87	□□□□□ -0.19
PUM1-215	ENST00000525948	CCDC85C	A6NKD9	419 aa		13.86	□□□□□ -0.19
PUM1-215	ENST00000525948	A1BG	P04217	495 aa		13.86	□□□□□ -0.19
PUM1-215	ENST00000525948	CASP8AP2	Q9UKL3	1982 aa		13.85	□□□□□ -0.19
PUM1-215	ENST00000525948	PIP4K2A	P48426	406 aa	Predicted RBP	13.85	□□□□□ -0.19
PUM1-215	ENST00000525948	FMR1	Q06787	632 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
PUM1-215	ENST00000525948	PNMA8A	Q86V59	439 aa	Predicted RBP	13.85	□□□□□ -0.19
PUM1-215	ENST00000525948	DZIP3	Q86Y13	1208 aa	Known RBP	13.85	□□□□□ -0.19
PUM1-215	ENST00000525948	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
PUM1-215	ENST00000525948	COL3A1	P02461	1466 aa	Predicted RBP	13.85	□□□□□ -0.19
PUM1-215	ENST00000525948	FZD9	O00144	591 aa		13.84	□□□□□ -0.19
PUM1-215	ENST00000525948	NPR1	P16066	1061 aa		13.84	□□□□□ -0.19
PUM1-215	ENST00000525948	IARS	P41252	1262 aa	Known RBP	13.84	□□□□□ -0.19
PUM1-215	ENST00000525948	RGS19	P49795	217 aa		13.84	□□□□□ -0.19
PUM1-215	ENST00000525948	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.84	□□□□□ -0.19
PUM1-215	ENST00000525948	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.84	□□□□□ -0.19
PUM1-215	ENST00000525948	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.84	□□□□□ -0.19
PUM1-215	ENST00000525948	TSKS	Q9UJT2	592 aa		13.84	□□□□□ -0.19
PUM1-215	ENST00000525948	TNRC18	O15417	2968 aa	Predicted RBP	13.83	□□□□□ -0.19
PUM1-215	ENST00000525948	HSPA5	P11021	654 aa	Known RBP	13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	TEF	Q10587	303 aa		13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	GRM1	Q13255	1194 aa		13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	CYP4F22	Q6NT55	531 aa		13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	GPC2	Q8N158	579 aa		13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	IL17RE	Q8NFR9	667 aa		13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	CAPNS2	Q96L46	248 aa		13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	FMNL2	Q96PY5	1086 aa		13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	KNSTRN	Q9Y448	316 aa		13.83	□□□□□ -0.2
PUM1-215	ENST00000525948	LAMB4	A4D0S4	1761 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms