RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 SOGA3Q5TF21 947 aa22.88■■□□□ 1.25
TSKU-202ENST00000525167 DPY19L2Q6NUT2 758 aa22.88■■□□□ 1.25
TSKU-202ENST00000525167 ZNF652Q9Y2D9 606 aa22.88■■□□□ 1.25
TSKU-202ENST00000525167 USP16Q9Y5T5 823 aa22.88■■□□□ 1.25
TSKU-202ENST00000525167 C21orf2O43822 256 aa22.87■■□□□ 1.25
TSKU-202ENST00000525167 SRGNP10124 158 aa22.87■■□□□ 1.25
TSKU-202ENST00000525167 CCDC88AQ3V6T2 1871 aa22.87■■□□□ 1.25
TSKU-202ENST00000525167 MASTLQ96GX5 879 aa22.86■■□□□ 1.25
TSKU-202ENST00000525167 DICER1Q9UPY3 1922 aaKnown RBP22.86■■□□□ 1.25
TSKU-202ENST00000525167 ARFGEF2Q9Y6D5 1785 aa22.86■■□□□ 1.25
TSKU-202ENST00000525167 HTRA3P83110 453 aa22.85■■□□□ 1.25
TSKU-202ENST00000525167 ERFEQ4G0M1 354 aa22.85■■□□□ 1.25
TSKU-202ENST00000525167 MCM10Q7L590 875 aa22.85■■□□□ 1.25
TSKU-202ENST00000525167 TAOK3Q9H2K8 898 aa22.85■■□□□ 1.25
TSKU-202ENST00000525167 PRPF40BQ6NWY9 871 aaKnown RBP22.84■■□□□ 1.25
TSKU-202ENST00000525167 CCDC24Q8N4L8 307 aa22.84■■□□□ 1.25
TSKU-202ENST00000525167 NBPF5PQ86XG9 351 aaPredicted RBP22.83■■□□□ 1.25
TSKU-202ENST00000525167 PRAMEF22A3QJZ6 481 aa22.82■■□□□ 1.24
TSKU-202ENST00000525167 ZNF219Q9P2Y4 722 aaPredicted RBP22.82■■□□□ 1.24
TSKU-202ENST00000525167 POTECB2RU33 542 aa22.81■■□□□ 1.24
TSKU-202ENST00000525167 TAF7Q15545 349 aaPredicted RBP22.81■■□□□ 1.24
TSKU-202ENST00000525167 SLX4Q8IY92 1834 aa22.8■■□□□ 1.24
TSKU-202ENST00000525167 KLRG2A4D1S0 409 aaPredicted RBP22.8■■□□□ 1.24
TSKU-202ENST00000525167 PIP4K2AP48426 406 aaPredicted RBP22.8■■□□□ 1.24
TSKU-202ENST00000525167 TPTE2Q6XPS3 522 aa22.8■■□□□ 1.24
TSKU-202ENST00000525167 NBPF26B4DH59 902 aa22.79■■□□□ 1.24
TSKU-202ENST00000525167 NPR1P16066 1061 aa22.79■■□□□ 1.24
TSKU-202ENST00000525167 NBPF10Q6P3W6 841 aaKnown RBP22.79■■□□□ 1.24
TSKU-202ENST00000525167 NBPF15Q8N660 670 aa22.79■■□□□ 1.24
TSKU-202ENST00000525167 NEFMP07197 916 aa22.78■■□□□ 1.24
TSKU-202ENST00000525167 DCTN1Q14203 1278 aa22.78■■□□□ 1.24
TSKU-202ENST00000525167 C7orf43Q8WVR3 580 aa22.78■■□□□ 1.24
TSKU-202ENST00000525167 NIP7Q9Y221 180 aaKnown RBP eCLIP22.78■■□□□ 1.24
TSKU-202ENST00000525167 LAMB4A4D0S4 1761 aa22.78■■□□□ 1.24
TSKU-202ENST00000525167 CCDC93Q567U6 631 aa22.77■■□□□ 1.24
TSKU-202ENST00000525167 PNISRQ8TF01 805 aaKnown RBP22.77■■□□□ 1.24
TSKU-202ENST00000525167 CACNA1SQ13698 1873 aa22.77■■□□□ 1.24
TSKU-202ENST00000525167 IQCA1LA6NCM1 817 aa22.73■■□□□ 1.23
TSKU-202ENST00000525167 FKBP4Q02790 459 aaKnown RBP eCLIP22.73■■□□□ 1.23
TSKU-202ENST00000525167 CHADLQ6NUI6 762 aa22.73■■□□□ 1.23
TSKU-202ENST00000525167 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
TSKU-202ENST00000525167 ERVV-1B6SEH8 477 aa22.72■■□□□ 1.23
TSKU-202ENST00000525167 DDNO94850 711 aaPredicted RBP22.72■■□□□ 1.23
TSKU-202ENST00000525167 RTKN2Q8IZC4 609 aa22.72■■□□□ 1.23
TSKU-202ENST00000525167 L3MBTL3Q96JM7 780 aaPredicted RBP22.72■■□□□ 1.23
TSKU-202ENST00000525167 NYXQ9GZU5 481 aa22.72■■□□□ 1.23
TSKU-202ENST00000525167 ALDH1B1P30837 517 aa22.71■■□□□ 1.23
TSKU-202ENST00000525167 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
TSKU-202ENST00000525167 PCNTO95613 3336 aa22.71■■□□□ 1.23
TSKU-202ENST00000525167 HLFQ16534 295 aa22.7■■□□□ 1.22
TSKU-202ENST00000525167 PLEKHF1Q96S99 279 aa22.7■■□□□ 1.22
TSKU-202ENST00000525167 SCN4AP35499 1836 aa22.7■■□□□ 1.22
TSKU-202ENST00000525167 DLG5Q8TDM6 1919 aa22.69■■□□□ 1.22
TSKU-202ENST00000525167 IBTKQ9P2D0 1353 aaPredicted RBP22.69■■□□□ 1.22
TSKU-202ENST00000525167 GTF2E1P29083 439 aaPredicted RBP22.69■■□□□ 1.22
TSKU-202ENST00000525167 NFE2L2Q16236 605 aa22.69■■□□□ 1.22
TSKU-202ENST00000525167 CREBZFQ9NS37 354 aa22.69■■□□□ 1.22
TSKU-202ENST00000525167 MIS18AQ9NYP9 233 aa22.69■■□□□ 1.22
TSKU-202ENST00000525167 RIC1Q4ADV7 1423 aa22.68■■□□□ 1.22
TSKU-202ENST00000525167 MAP3K15Q6ZN16 1313 aa22.68■■□□□ 1.22
TSKU-202ENST00000525167 CRY2Q49AN0 593 aa22.68■■□□□ 1.22
TSKU-202ENST00000525167 COL13A1Q5TAT6 717 aaPredicted RBP22.68■■□□□ 1.22
TSKU-202ENST00000525167 EIF4A1P60842 406 aaKnown RBP22.67■■□□□ 1.22
TSKU-202ENST00000525167 KIF6Q6ZMV9 814 aa22.67■■□□□ 1.22
TSKU-202ENST00000525167 LDHDQ86WU2 507 aa22.67■■□□□ 1.22
TSKU-202ENST00000525167 ERBB4Q15303 1308 aa22.66■■□□□ 1.22
TSKU-202ENST00000525167 FAM177BA6PVY3 158 aa22.66■■□□□ 1.22
TSKU-202ENST00000525167 TAF1DQ9H5J8 278 aaPredicted RBP22.66■■□□□ 1.22
TSKU-202ENST00000525167 ZNF277Q9NRM2 450 aaPredicted RBP22.66■■□□□ 1.22
TSKU-202ENST00000525167 MAPK8IP3Q9UPT6 1336 aa22.65■■□□□ 1.22
TSKU-202ENST00000525167 CC2D2BQ6DHV5 1058 aa22.65■■□□□ 1.22
TSKU-202ENST00000525167 PSMD1Q99460 953 aa22.65■■□□□ 1.22
TSKU-202ENST00000525167 POTEIP0CG38 1075 aa22.64■■□□□ 1.21
TSKU-202ENST00000525167 POTEJP0CG39 1038 aa22.64■■□□□ 1.21
TSKU-202ENST00000525167 HSPA1AP0DMV8 641 aaKnown RBP22.64■■□□□ 1.21
TSKU-202ENST00000525167 HSPA1BP0DMV9 641 aaKnown RBP22.64■■□□□ 1.21
TSKU-202ENST00000525167 SNED1Q8TER0 1413 aa22.64■■□□□ 1.21
TSKU-202ENST00000525167 NUP98P52948 1817 aa22.64■■□□□ 1.21
TSKU-202ENST00000525167 ABCC12Q96J65 1359 aa22.63■■□□□ 1.21
TSKU-202ENST00000525167 IARSP41252 1262 aaKnown RBP22.63■■□□□ 1.21
TSKU-202ENST00000525167 GRIPAP1Q4V328 841 aa22.63■■□□□ 1.21
TSKU-202ENST00000525167 RRP7AQ9Y3A4 280 aaKnown RBP22.63■■□□□ 1.21
TSKU-202ENST00000525167 PASKQ96RG2 1323 aa22.62■■□□□ 1.21
TSKU-202ENST00000525167 ZNF541Q9H0D2 1346 aa22.62■■□□□ 1.21
TSKU-202ENST00000525167 FZD9O00144 591 aa22.62■■□□□ 1.21
TSKU-202ENST00000525167 HOXA10P31260 410 aaPredicted RBP22.62■■□□□ 1.21
TSKU-202ENST00000525167 NGEFQ8N5V2 710 aa22.62■■□□□ 1.21
TSKU-202ENST00000525167 HACL1Q9UJ83 578 aa22.62■■□□□ 1.21
TSKU-202ENST00000525167 OLFM4Q6UX06 510 aa22.61■■□□□ 1.21
TSKU-202ENST00000525167 TTLL7Q6ZT98 887 aa22.61■■□□□ 1.21
TSKU-202ENST00000525167 NUTM1Q86Y26 1132 aa22.61■■□□□ 1.21
TSKU-202ENST00000525167 SYNE4Q8N205 404 aa22.61■■□□□ 1.21
TSKU-202ENST00000525167 UBN2Q6ZU65 1347 aa22.6■■□□□ 1.21
TSKU-202ENST00000525167 MYL6BP14649 208 aa22.6■■□□□ 1.21
TSKU-202ENST00000525167 PNMA8AQ86V59 439 aaPredicted RBP22.6■■□□□ 1.21
TSKU-202ENST00000525167 TNS4Q8IZW8 715 aa22.6■■□□□ 1.21
TSKU-202ENST00000525167 GPC2Q8N158 579 aa22.6■■□□□ 1.21
TSKU-202ENST00000525167 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
TSKU-202ENST00000525167 THUMPD2Q9BTF0 503 aaKnown RBP22.6■■□□□ 1.21
TSKU-202ENST00000525167 BABAM1Q9NWV8 329 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms